BacMap

Definition	Psychrobacter cryohalolentis K5 chromosome, complete genome.
Accession	NC_007969
Length	3,059,876

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The map label for this gene is livG [H]

Identifier: 93005819

GI number: 93005819

Start: 1180764

End: 1181735

Strand: Reverse

Name: livG [H]

Synonym: Pcryo_0991

Alternate gene names: 93005819

Gene position: 1181735-1180764 (Counterclockwise)

Preceding gene: 93005820

Following gene: 93005818

Centisome position: 38.62

GC content: 42.7

Gene sequence:

>972_bases
ATGTTAATAACTAATGCTGATACTTCTAATGTTGCTACTTCCCAAAAAGTTACTAACGATGCGCTTGTTAAAAACAATCC
TAGTATCAATAATCCAATGAAAAACTCTAAAAATACACCACACATAACGGTCGCAGAAAACACGCCTACCCGACCAGTCA
CTAGTTTGGCTGAAGATTGCGGAGATAGCGGAGGCTTGGCGCATCCTGTTCCCAAATCAGGGCCGGATATGAGACATGGT
ATTGCGCTGTATTTAGAAGGCGTTAGCGTGTGGTTTGACTCATTCCGTGCACTCAATGATCTATCTTTATACATTGAGGC
AGGCGAGCTACGCTGCATCATCGGCCCTAATGGCGCAGGTAAGACGACTTTAATGGATGTTATTACGGGTAAAACGCGTC
CTACTAAAGGCAGTGCATTTTTCGGTCAAGTACATAATTTAGCCAAATTATCTACCGAAGAAATAGCGGAAGCAGGCATT
GGCCGTAAGTTTCAAAAACCTACCGTATTTGAGAAATTTACTGTACTCGATAACTTAATGCTGGCCGCGCCAAAGGACAA
GCGAGTGTCAAAAAGCTGGTTTACTCGTATTGATGCAGAAATCCAAGATACCCTTGACTCAACGCTTGAGCAAATACGCC
TAAAAGAGCTGATTAACAAGCCAGCAGGACTATTATCTCATGGTCAAAAGCAGTGGCTAGAGATTGGGATGTTATTGATG
CAAAGACCAAAACTTATCTTACTTGATGAACCAGTGGCAGGCATGACAGATGCCGAAACCGAACATACCGCTGAGTTATG
TCTGCGCCTTAAAAAAAATCATACTTTAATCGTGGTTGAGCATGACATGACTTTCATTGATGCCATCAGTGAGAAAGTAA
CGGTCTTAGCAAATGGCGCTATTTTGGCTGAAGGCACGTTGAGTGAAGTACAGAATAATGAAGCCGTCATTGAGACTTAC
TTGGGTCGATAA

Upstream 100 bases:

>100_bases
TTTGGTTGCTTATCCTCGGTGGATTATTTGTGGTGGTTACTTTATTTCTCCCTAACGGCATCATTGGCGTACTTGATCGT
TTTAAAAAGGAAAAAGAATA

Downstream 100 bases:

>100_bases
TTGATAGTAGTGCTTAGAAATAGACCTAAAAAATAGAGGTGCTTATATGTTAGAAATTAATGCCATAAATCAATATTATG
GTGGCAGTCACATTTTACGT

Product: ABC transporter-like protein

Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]

Alternate protein names: LIV-I protein G [H]

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MLITNADTSNVATSQKVTNDALVKNNPSINNPMKNSKNTPHITVAENTPTRPVTSLAEDCGDSGGLAHPVPKSGPDMRHG
IALYLEGVSVWFDSFRALNDLSLYIEAGELRCIIGPNGAGKTTLMDVITGKTRPTKGSAFFGQVHNLAKLSTEEIAEAGI
GRKFQKPTVFEKFTVLDNLMLAAPKDKRVSKSWFTRIDAEIQDTLDSTLEQIRLKELINKPAGLLSHGQKQWLEIGMLLM
QRPKLILLDEPVAGMTDAETEHTAELCLRLKKNHTLIVVEHDMTFIDAISEKVTVLANGAILAEGTLSEVQNNEAVIETY
LGR

Sequences:

>Translated_323_residues
MLITNADTSNVATSQKVTNDALVKNNPSINNPMKNSKNTPHITVAENTPTRPVTSLAEDCGDSGGLAHPVPKSGPDMRHG
IALYLEGVSVWFDSFRALNDLSLYIEAGELRCIIGPNGAGKTTLMDVITGKTRPTKGSAFFGQVHNLAKLSTEEIAEAGI
GRKFQKPTVFEKFTVLDNLMLAAPKDKRVSKSWFTRIDAEIQDTLDSTLEQIRLKELINKPAGLLSHGQKQWLEIGMLLM
QRPKLILLDEPVAGMTDAETEHTAELCLRLKKNHTLIVVEHDMTFIDAISEKVTVLANGAILAEGTLSEVQNNEAVIETY
LGR
>Mature_323_residues
MLITNADTSNVATSQKVTNDALVKNNPSINNPMKNSKNTPHITVAENTPTRPVTSLAEDCGDSGGLAHPVPKSGPDMRHG
IALYLEGVSVWFDSFRALNDLSLYIEAGELRCIIGPNGAGKTTLMDVITGKTRPTKGSAFFGQVHNLAKLSTEEIAEAGI
GRKFQKPTVFEKFTVLDNLMLAAPKDKRVSKSWFTRIDAEIQDTLDSTLEQIRLKELINKPAGLLSHGQKQWLEIGMLLM
QRPKLILLDEPVAGMTDAETEHTAELCLRLKKNHTLIVVEHDMTFIDAISEKVTVLANGAILAEGTLSEVQNNEAVIETY
LGR

Specific function: Component of the leucine-specific transport system [H]

COG id: COG4674

COG function: function code R; Uncharacterized ABC-type transport system, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI11967969, Length=217, Percent_Identity=25.8064516129032, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI21536376, Length=236, Percent_Identity=26.6949152542373, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI47078218, Length=218, Percent_Identity=27.5229357798165, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI45446740, Length=217, Percent_Identity=27.6497695852535, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI116734710, Length=216, Percent_Identity=27.3148148148148, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI31657092, Length=209, Percent_Identity=26.7942583732057, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI27881501, Length=217, Percent_Identity=25.3456221198157, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI30795238, Length=217, Percent_Identity=25.3456221198157, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI27262624, Length=214, Percent_Identity=30.8411214953271, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI27262626, Length=214, Percent_Identity=30.8411214953271, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI27436953, Length=212, Percent_Identity=26.4150943396226, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI150417984, Length=204, Percent_Identity=27.4509803921569, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI105990541, Length=210, Percent_Identity=24.2857142857143, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI153792144, Length=213, Percent_Identity=28.6384976525822, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI171184400, Length=215, Percent_Identity=27.4418604651163, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI6005701, Length=220, Percent_Identity=27.7272727272727, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI27477115, Length=210, Percent_Identity=25.2380952380952, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI21536378, Length=221, Percent_Identity=24.8868778280543, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI148612844, Length=225, Percent_Identity=28.8888888888889, Blast_Score=66, Evalue=5e-11,
Organism=Homo sapiens, GI255708477, Length=225, Percent_Identity=28.8888888888889, Blast_Score=66, Evalue=5e-11,
Organism=Escherichia coli, GI1789864, Length=249, Percent_Identity=34.5381526104418, Blast_Score=152, Evalue=3e-38,
Organism=Escherichia coli, GI1790525, Length=241, Percent_Identity=31.1203319502075, Blast_Score=110, Evalue=9e-26,
Organism=Escherichia coli, GI87082268, Length=248, Percent_Identity=31.4516129032258, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI1790190, Length=243, Percent_Identity=30.0411522633745, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1789593, Length=232, Percent_Identity=27.1551724137931, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1786398, Length=227, Percent_Identity=30.8370044052863, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI1789672, Length=226, Percent_Identity=26.1061946902655, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI1788210, Length=244, Percent_Identity=27.0491803278689, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1790739, Length=235, Percent_Identity=28.5106382978723, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1788761, Length=218, Percent_Identity=30.2752293577982, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1788897, Length=231, Percent_Identity=28.1385281385281, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1790467, Length=222, Percent_Identity=28.3783783783784, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787089, Length=239, Percent_Identity=25.5230125523013, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI48995001, Length=248, Percent_Identity=26.2096774193548, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1790544, Length=242, Percent_Identity=26.8595041322314, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1787792, Length=226, Percent_Identity=25.6637168141593, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788472, Length=256, Percent_Identity=26.953125, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1789032, Length=226, Percent_Identity=28.7610619469027, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1790162, Length=223, Percent_Identity=24.6636771300448, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1787029, Length=223, Percent_Identity=25.5605381165919, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786803, Length=237, Percent_Identity=25.7383966244726, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786253, Length=226, Percent_Identity=27.4336283185841, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI87081791, Length=230, Percent_Identity=27.3913043478261, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787712, Length=227, Percent_Identity=28.6343612334802, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI87081709, Length=239, Percent_Identity=24.6861924686192, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI87081782, Length=232, Percent_Identity=30.1724137931034, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1789991, Length=220, Percent_Identity=25.9090909090909, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI48994943, Length=233, Percent_Identity=25.7510729613734, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1786872, Length=229, Percent_Identity=27.9475982532751, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1787370, Length=233, Percent_Identity=26.1802575107296, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1789873, Length=218, Percent_Identity=24.7706422018349, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1786345, Length=234, Percent_Identity=26.4957264957265, Blast_Score=71, Evalue=9e-14,
Organism=Escherichia coli, GI87081834, Length=228, Percent_Identity=27.1929824561404, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1787164, Length=227, Percent_Identity=26.431718061674, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787500, Length=231, Percent_Identity=26.4069264069264, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87082267, Length=243, Percent_Identity=23.8683127572016, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787112, Length=219, Percent_Identity=29.6803652968037, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1786698, Length=226, Percent_Identity=26.1061946902655, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI48994883, Length=228, Percent_Identity=27.1929824561404, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1786703, Length=211, Percent_Identity=26.0663507109005, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1788225, Length=234, Percent_Identity=26.0683760683761, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1787105, Length=207, Percent_Identity=27.0531400966184, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI1789586, Length=221, Percent_Identity=26.2443438914027, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1787182, Length=238, Percent_Identity=26.0504201680672, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1789962, Length=234, Percent_Identity=24.7863247863248, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786981, Length=210, Percent_Identity=31.9047619047619, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI48994997, Length=226, Percent_Identity=22.1238938053097, Blast_Score=61, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17565586, Length=214, Percent_Identity=28.9719626168224, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17510237, Length=228, Percent_Identity=27.1929824561404, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI115533608, Length=218, Percent_Identity=28.4403669724771, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71983510, Length=289, Percent_Identity=26.2975778546713, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71983516, Length=289, Percent_Identity=26.2975778546713, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71983523, Length=212, Percent_Identity=28.3018867924528, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI25146777, Length=219, Percent_Identity=26.4840182648402, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI115534520, Length=226, Percent_Identity=26.1061946902655, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6323217, Length=225, Percent_Identity=24, Blast_Score=66, Evalue=9e-12,
Organism=Drosophila melanogaster, GI221500365, Length=242, Percent_Identity=24.7933884297521, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI116007184, Length=242, Percent_Identity=24.3801652892562, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI28571209, Length=250, Percent_Identity=23.6, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI221512771, Length=219, Percent_Identity=25.5707762557078, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24643674, Length=237, Percent_Identity=24.8945147679325, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24666092, Length=238, Percent_Identity=23.5294117647059, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24581191, Length=205, Percent_Identity=28.2926829268293, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24581189, Length=205, Percent_Identity=28.2926829268293, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24581193, Length=205, Percent_Identity=28.2926829268293, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24581195, Length=205, Percent_Identity=28.2926829268293, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI28574259, Length=215, Percent_Identity=23.7209302325581, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24648279, Length=210, Percent_Identity=23.8095238095238, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI85724858, Length=209, Percent_Identity=30.622009569378, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI85724856, Length=209, Percent_Identity=30.622009569378, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24580547, Length=209, Percent_Identity=30.622009569378, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24580551, Length=209, Percent_Identity=30.622009569378, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24580549, Length=209, Percent_Identity=30.622009569378, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24580545, Length=209, Percent_Identity=30.622009569378, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI161078426, Length=210, Percent_Identity=23.8095238095238, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 35311; Mature: 35311

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLITNADTSNVATSQKVTNDALVKNNPSINNPMKNSKNTPHITVAENTPTRPVTSLAEDC
CEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHC
GDSGGLAHPVPKSGPDMRHGIALYLEGVSVWFDSFRALNDLSLYIEAGELRCIIGPNGAG
CCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCEEEEEEECCEEEEECCCCCC
KTTLMDVITGKTRPTKGSAFFGQVHNLAKLSTEEIAEAGIGRKFQKPTVFEKFTVLDNLM
CHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
LAAPKDKRVSKSWFTRIDAEIQDTLDSTLEQIRLKELINKPAGLLSHGQKQWLEIGMLLM
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
QRPKLILLDEPVAGMTDAETEHTAELCLRLKKNHTLIVVEHDMTFIDAISEKVTVLANGA
CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHEEEEECCE
ILAEGTLSEVQNNEAVIETYLGR
EEECCCHHHHCCCHHHHHHHCCC
>Mature Secondary Structure
MLITNADTSNVATSQKVTNDALVKNNPSINNPMKNSKNTPHITVAENTPTRPVTSLAEDC
CEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHC
GDSGGLAHPVPKSGPDMRHGIALYLEGVSVWFDSFRALNDLSLYIEAGELRCIIGPNGAG
CCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCEEEEEEECCEEEEECCCCCC
KTTLMDVITGKTRPTKGSAFFGQVHNLAKLSTEEIAEAGIGRKFQKPTVFEKFTVLDNLM
CHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
LAAPKDKRVSKSWFTRIDAEIQDTLDSTLEQIRLKELINKPAGLLSHGQKQWLEIGMLLM
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
QRPKLILLDEPVAGMTDAETEHTAELCLRLKKNHTLIVVEHDMTFIDAISEKVTVLANGA
CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHEEEEECCE
ILAEGTLSEVQNNEAVIETYLGR
EEECCCHHHHCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]

Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]