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The map label for this gene is ureD2

Identifier: 93005817

GI number: 93005817

Start: 1178985

End: 1179881

Strand: Reverse

Name: ureD2

Synonym: Pcryo_0989

Alternate gene names: 93005817

Gene position: 1179881-1178985 (Counterclockwise)

Preceding gene: 93005818

Following gene: 93005816

Centisome position: 38.56

GC content: 45.71

Gene sequence:

>897_bases
ATGGTGCAGCGTGCGCTGTATCCTGAGCCTGATAGTACTGATAGTAGCCAAGCAGGAATTTGCCATATTTATGTGTTGTA
TCCTCCTGCTGGTATCGCCGATGATGACCGCTTAACACTGGAATTTGACCTACACTCTAACAGCCATGCGGTGATTACCA
CCCCTGGAGCCGGCAAATGGTACGGGCAACGCAAATCATTACGATACTCTAGACCTAGCGACTCATCAAAATTTACCAAC
GGTACTCAATCGGCAAATAGCAACACTTCTAACGACTGTTTTAATGATGTTGTCAGCGCAGAACAGCATATCGACGCCCG
CCTCGATGACCACGCTGTCCTTGAATGGCTACCACAAGAAAGCATTTATTACGATCATTCTGTCTCTACTGCCAATAACC
GCTTTTATTTAGCTAAGACGGCAAGTTTATTGACTTGGGATATTGCTGTGTTCGGACGTCAAGCGTATCAAGAGACTTTT
GCTAATGGTCATTATGCCAACCGCTTAGAGATATGGCGTGAGAGTGATCTATTGGTCAGTGAGTGCACCGCCCAACAAGC
CAATACGCGCTGGTTTACCTCACCATTAGGATTGAATGATCAACATGTGCATGGCTCTTTTTGGGCAATACCTAGCACAG
AGGTCATTGCGCCAGAACTACAGAATAATCCGCTCAAGCTCGGCCAATATTTAGATGCCACTATTACCGAGATACGCAAT
CTCATTGATACGCAGTCACTACCCATTCACTGTACTCACAATTTTCAAGGTATTAATTGCCGTTATTTAGGGGCAGATGT
GCGTGCCTGCTTTGAGGCCTTTTACCAAATTCGCGAGCTTATCAGGTCTAAATGGTACAAGCTTGAGCCTCATCGACCGA
GAATTTGGGACACTTAA

Upstream 100 bases:

>100_bases
TACAATTTTGACTTGGCAATCCTCACTACAGCTTCATTTCGACTGCGCCTCTAATGCTGCAAAAACTCGGCTGTATCATC
GTGCCCATACTGGGGCATTA

Downstream 100 bases:

>100_bases
TATCATGTGCTCCCACTTAATCTCATCCTTGAACAATGCTGAACCAAACCAGAATGACTTTACTTAGCACATCTAACTTG
GCACATTTACTTTATAAAGA

Product: urease accessory protein UreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MVQRALYPEPDSTDSSQAGICHIYVLYPPAGIADDDRLTLEFDLHSNSHAVITTPGAGKWYGQRKSLRYSRPSDSSKFTN
GTQSANSNTSNDCFNDVVSAEQHIDARLDDHAVLEWLPQESIYYDHSVSTANNRFYLAKTASLLTWDIAVFGRQAYQETF
ANGHYANRLEIWRESDLLVSECTAQQANTRWFTSPLGLNDQHVHGSFWAIPSTEVIAPELQNNPLKLGQYLDATITEIRN
LIDTQSLPIHCTHNFQGINCRYLGADVRACFEAFYQIRELIRSKWYKLEPHRPRIWDT

Sequences:

>Translated_298_residues
MVQRALYPEPDSTDSSQAGICHIYVLYPPAGIADDDRLTLEFDLHSNSHAVITTPGAGKWYGQRKSLRYSRPSDSSKFTN
GTQSANSNTSNDCFNDVVSAEQHIDARLDDHAVLEWLPQESIYYDHSVSTANNRFYLAKTASLLTWDIAVFGRQAYQETF
ANGHYANRLEIWRESDLLVSECTAQQANTRWFTSPLGLNDQHVHGSFWAIPSTEVIAPELQNNPLKLGQYLDATITEIRN
LIDTQSLPIHCTHNFQGINCRYLGADVRACFEAFYQIRELIRSKWYKLEPHRPRIWDT
>Mature_298_residues
MVQRALYPEPDSTDSSQAGICHIYVLYPPAGIADDDRLTLEFDLHSNSHAVITTPGAGKWYGQRKSLRYSRPSDSSKFTN
GTQSANSNTSNDCFNDVVSAEQHIDARLDDHAVLEWLPQESIYYDHSVSTANNRFYLAKTASLLTWDIAVFGRQAYQETF
ANGHYANRLEIWRESDLLVSECTAQQANTRWFTSPLGLNDQHVHGSFWAIPSTEVIAPELQNNPLKLGQYLDATITEIRN
LIDTQSLPIHCTHNFQGINCRYLGADVRACFEAFYQIRELIRSKWYKLEPHRPRIWDT

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URED2_PSYCK (Q1QC33)

Other databases:

- EMBL:   CP000323
- RefSeq:   YP_580254.1
- STRING:   Q1QC33
- GeneID:   4035734
- GenomeReviews:   CP000323_GR
- KEGG:   pcr:Pcryo_0989
- NMPDR:   fig|335284.3.peg.601
- eggNOG:   COG0829
- HOGENOM:   HBG711156
- BioCyc:   PCRY335284:PCRYO_0989-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01384
- InterPro:   IPR002669

Pfam domain/function: PF01774 UreD

EC number: NA

Molecular weight: Translated: 33990; Mature: 33990

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQRALYPEPDSTDSSQAGICHIYVLYPPAGIADDDRLTLEFDLHSNSHAVITTPGAGKW
CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCEEEEECCCCCCC
YGQRKSLRYSRPSDSSKFTNGTQSANSNTSNDCFNDVVSAEQHIDARLDDHAVLEWLPQE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCC
SIYYDHSVSTANNRFYLAKTASLLTWDIAVFGRQAYQETFANGHYANRLEIWRESDLLVS
CEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCCHHH
ECTAQQANTRWFTSPLGLNDQHVHGSFWAIPSTEVIAPELQNNPLKLGQYLDATITEIRN
HHHHHHCCCEEEECCCCCCCCCCCCEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHH
LIDTQSLPIHCTHNFQGINCRYLGADVRACFEAFYQIRELIRSKWYKLEPHRPRIWDT
HHCCCCCCEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCC
>Mature Secondary Structure
MVQRALYPEPDSTDSSQAGICHIYVLYPPAGIADDDRLTLEFDLHSNSHAVITTPGAGKW
CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCEEEEECCCCCCC
YGQRKSLRYSRPSDSSKFTNGTQSANSNTSNDCFNDVVSAEQHIDARLDDHAVLEWLPQE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCC
SIYYDHSVSTANNRFYLAKTASLLTWDIAVFGRQAYQETFANGHYANRLEIWRESDLLVS
CEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCCHHH
ECTAQQANTRWFTSPLGLNDQHVHGSFWAIPSTEVIAPELQNNPLKLGQYLDATITEIRN
HHHHHHCCCEEEECCCCCCCCCCCCEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHH
LIDTQSLPIHCTHNFQGINCRYLGADVRACFEAFYQIRELIRSKWYKLEPHRPRIWDT
HHCCCCCCEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA