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The map label for this gene is hsdS [C]

Identifier: 93005779

GI number: 93005779

Start: 1133642

End: 1134901

Strand: Reverse

Name: hsdS [C]

Synonym: Pcryo_0951

Alternate gene names: 93005779

Gene position: 1134901-1133642 (Counterclockwise)

Preceding gene: 93005780

Following gene: 93005778

Centisome position: 37.09

GC content: 38.57

Gene sequence:

>1260_bases
ATGAATGAGGTTAAAATGCCTGAGGGTTATAAGCAAACTGAAATTGGGGTTATCCCTGAGGATTGGGAAGTTAAAGATAT
TGGTGAAGCTTTAACAATCAGACATGGTAAGGATCAGAAACAAGTTGAAAGTACTCGTGGTCAATATCCAATATTTGGTA
CTGGCGGGCAAATGGGATGGGCAAGCGACTTTCTATATGACAAACCTTCTGTATTGATTGGTAGAAAAGGCTCTATCAAT
AAACCAAGATATATCAACGTACCCTTTTGGACAGTGGATACTCTTTTCTATTCACAAGTGCATAATGGCTACGATGAAAA
ATTCATGTTCTATAAGTTTTGTCTGATTGACTGGATGAATTATAACGAAGCTTCAGGCGTACCAAGCTTAAATGCTAGTA
CTATTAGTAATGTTAAAATATCAGTACCAAAGAAACCTGAACAAACCGCTATCGCCACTGCCCTATCTGATATCGATAAT
TTAATCCAGTCACTGGAAAAACTGATTGCAAAAAAAGAAGCCATTAAAACCGGCACCATGCAACAGATCCTCACTGGTAA
AACTCGCCTGCCTGAGTTTGCCACTCGTGATGATGGCAGTGCTAAGGAACTTAAACAGACTGAATTAGGGCAGATTCCTG
AGGATTGGGAGGTAATTGAGTTTGGAAAACTACTAAAAGAGTTCAGAAATGGCTATTCATTTTCTGCTAAAGATTATATA
AAAAATGGCACTCCAATTATTACCATGTCACAGATCGGATTAAACGGCTCGTTCCAATACAATCCAAATGAAGTTAAAAA
GTGGGATGCGAGCCAGTTTGAGCATCTTAAAGACTTTTGGGTTAAAGATGGTGACTTACTTATAGCAATGACAGATGTAA
CACCTGATAAAAACCTAATTGGACAAATGACTATTGCAGAATTGACTCATACAGCCTTATTAAATCAGCGTGTTGGCTTA
TTAAGATTAAATAAAGATTTAGCACAGTCTAACTATCTAAGATATCTTAGCAGCTTACCGTTGTGGAGAACTTATTGTAA
AGGAGTAGCATCACTAGGCGTACAAGCGAATATAGGAACAAAAGAAATAAAACAAGCATCAGTTACCTTACCTTTAGTTG
AAGAACAAACCGCCATCGCCACTATCCTGTCCGATATGGATGCGGAGATTCAAGCATTGGAAGGAAGACTAGAGAAAACC
AAAGACATCAAGCAAGGCATGATGCAGCAGCTGTTGACTGGCAAGGTGCGGTTGGTTTAA

Upstream 100 bases:

>100_bases
TGGATGAGCGTTATGCTGAGCCTTTATCGCAAATCGTAGATGAGGTGGAGATGTTAGGTCAAAAAGTGCAAGCGCATCTG
CAAGCGATGGGAGTGGCGTA

Downstream 100 bases:

>100_bases
TAGGCTAATATTTTAAGCGTTAAGAGTATTCAACATTAATATCATCAATCAATTAACGGTATGTTATGAGCAACTCACAA
GAATTACATCAAAAAATTAT

Product: restriction modification system DNA specificity subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MNEVKMPEGYKQTEIGVIPEDWEVKDIGEALTIRHGKDQKQVESTRGQYPIFGTGGQMGWASDFLYDKPSVLIGRKGSIN
KPRYINVPFWTVDTLFYSQVHNGYDEKFMFYKFCLIDWMNYNEASGVPSLNASTISNVKISVPKKPEQTAIATALSDIDN
LIQSLEKLIAKKEAIKTGTMQQILTGKTRLPEFATRDDGSAKELKQTELGQIPEDWEVIEFGKLLKEFRNGYSFSAKDYI
KNGTPIITMSQIGLNGSFQYNPNEVKKWDASQFEHLKDFWVKDGDLLIAMTDVTPDKNLIGQMTIAELTHTALLNQRVGL
LRLNKDLAQSNYLRYLSSLPLWRTYCKGVASLGVQANIGTKEIKQASVTLPLVEEQTAIATILSDMDAEIQALEGRLEKT
KDIKQGMMQQLLTGKVRLV

Sequences:

>Translated_419_residues
MNEVKMPEGYKQTEIGVIPEDWEVKDIGEALTIRHGKDQKQVESTRGQYPIFGTGGQMGWASDFLYDKPSVLIGRKGSIN
KPRYINVPFWTVDTLFYSQVHNGYDEKFMFYKFCLIDWMNYNEASGVPSLNASTISNVKISVPKKPEQTAIATALSDIDN
LIQSLEKLIAKKEAIKTGTMQQILTGKTRLPEFATRDDGSAKELKQTELGQIPEDWEVIEFGKLLKEFRNGYSFSAKDYI
KNGTPIITMSQIGLNGSFQYNPNEVKKWDASQFEHLKDFWVKDGDLLIAMTDVTPDKNLIGQMTIAELTHTALLNQRVGL
LRLNKDLAQSNYLRYLSSLPLWRTYCKGVASLGVQANIGTKEIKQASVTLPLVEEQTAIATILSDMDAEIQALEGRLEKT
KDIKQGMMQQLLTGKVRLV
>Mature_419_residues
MNEVKMPEGYKQTEIGVIPEDWEVKDIGEALTIRHGKDQKQVESTRGQYPIFGTGGQMGWASDFLYDKPSVLIGRKGSIN
KPRYINVPFWTVDTLFYSQVHNGYDEKFMFYKFCLIDWMNYNEASGVPSLNASTISNVKISVPKKPEQTAIATALSDIDN
LIQSLEKLIAKKEAIKTGTMQQILTGKTRLPEFATRDDGSAKELKQTELGQIPEDWEVIEFGKLLKEFRNGYSFSAKDYI
KNGTPIITMSQIGLNGSFQYNPNEVKKWDASQFEHLKDFWVKDGDLLIAMTDVTPDKNLIGQMTIAELTHTALLNQRVGL
LRLNKDLAQSNYLRYLSSLPLWRTYCKGVASLGVQANIGTKEIKQASVTLPLVEEQTAIATILSDMDAEIQALEGRLEKT
KDIKQGMMQQLLTGKVRLV

Specific function: The M And S Subunits Together Form A Methyltransferase (Mtase) That Methylates Two Adenine Residues In Complementary Strands Of A Bipartite DNA Recognition Sequence. In The Presence Of The R Subunit The Complex Can Also Act As An Endonuclease, Binding To

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000055 [H]

Pfam domain/function: PF01420 Methylase_S [H]

EC number: NA

Molecular weight: Translated: 47196; Mature: 47196

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEVKMPEGYKQTEIGVIPEDWEVKDIGEALTIRHGKDQKQVESTRGQYPIFGTGGQMGW
CCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHEECCCCCHHHHHHHCCCCCEEECCCCCCC
ASDFLYDKPSVLIGRKGSINKPRYINVPFWTVDTLFYSQVHNGYDEKFMFYKFCLIDWMN
HHHHHCCCCCEEEECCCCCCCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
YNEASGVPSLNASTISNVKISVPKKPEQTAIATALSDIDNLIQSLEKLIAKKEAIKTGTM
CCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQILTGKTRLPEFATRDDGSAKELKQTELGQIPEDWEVIEFGKLLKEFRNGYSFSAKDYI
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHH
KNGTPIITMSQIGLNGSFQYNPNEVKKWDASQFEHLKDFWVKDGDLLIAMTDVTPDKNLI
CCCCCEEEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHH
GQMTIAELTHTALLNQRVGLLRLNKDLAQSNYLRYLSSLPLWRTYCKGVASLGVQANIGT
HHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCH
KEIKQASVTLPLVEEQTAIATILSDMDAEIQALEGRLEKTKDIKQGMMQQLLTGKVRLV
HHHHHHHCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECC
>Mature Secondary Structure
MNEVKMPEGYKQTEIGVIPEDWEVKDIGEALTIRHGKDQKQVESTRGQYPIFGTGGQMGW
CCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHEECCCCCHHHHHHHCCCCCEEECCCCCCC
ASDFLYDKPSVLIGRKGSINKPRYINVPFWTVDTLFYSQVHNGYDEKFMFYKFCLIDWMN
HHHHHCCCCCEEEECCCCCCCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
YNEASGVPSLNASTISNVKISVPKKPEQTAIATALSDIDNLIQSLEKLIAKKEAIKTGTM
CCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQILTGKTRLPEFATRDDGSAKELKQTELGQIPEDWEVIEFGKLLKEFRNGYSFSAKDYI
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHH
KNGTPIITMSQIGLNGSFQYNPNEVKKWDASQFEHLKDFWVKDGDLLIAMTDVTPDKNLI
CCCCCEEEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHH
GQMTIAELTHTALLNQRVGLLRLNKDLAQSNYLRYLSSLPLWRTYCKGVASLGVQANIGT
HHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCH
KEIKQASVTLPLVEEQTAIATILSDMDAEIQALEGRLEKTKDIKQGMMQQLLTGKVRLV
HHHHHHHCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]