| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is yfjM [C]
Identifier: 93005777
GI number: 93005777
Start: 1129928
End: 1132099
Strand: Reverse
Name: yfjM [C]
Synonym: Pcryo_0949
Alternate gene names: 93005777
Gene position: 1132099-1129928 (Counterclockwise)
Preceding gene: 93005778
Following gene: 93005776
Centisome position: 37.0
GC content: 36.05
Gene sequence:
>2172_bases ATGACAATGAATAACTCAAGTGTGAAAGTAAGTTCTTTACCTATCAAAAAACTGCTGACCAATGGCGATCAGTATGTCAT TCCGATGTATCAGCGTAACTATGCGTGGGGCACTGTTGAAATTGAAACATTAATCAAAGATATTATTGACGCTTATAATC GTGACCCAAACTTAACCTACTATTTAGGTACTTTAGTTGTCTTTGAAAAATCCAATACCAGTCAGGCTTTGTTTGAAGTG ATAGATGGTCAGCAACGCTTAACTACCCTAACCCTACTGGCAATATATTTACATCACAATCATCATCAGTATTGTCACTC TTATTTAGAACAATTCAACCAGACAAACTTATATTTTGAAAGTCGCCCACATTCAGATTACACCTTATCTTTGCTTTATA ACCGTGAGTCAGCACGCTTTGCCCAAGATGCCTCTATGAATCAGTCTATTATCGATGGTTATGATATCTTAACCAAAACG ATGACGTATCTTTTTAATGGAAATAATGAAGTCACATCCATCAATGAATTTTGTACCTTTTTATTCAATAAGGTAGAGAT AGCTAGGGTTCCTGTTCCTCAGGAGACAGACCTTAATCACTACTTTGAAGTAATGAACAATCGAGGTGAGCAATTAGAAA AACACGAAATCATTAAGGCCAGACTGCTATCAGCAATTAGCAGTGACACTTCTGCCGACACAAAGCAAATACAACATTGC AAAAGCCTGTTAGATTTGATTTGGAATACTTGCAGTCGTATGAATAAGTACGTGCAATATGGCTTTACAACTGATCTACG TAAAAAGATTTTCTCATCAGACTGGGCACATTTTGAGCCAAAATATTTTTCTGATTTGCTTGATTTTTATATTCAAGATT GCAACGAGCAAGCTGCCAAAAAGAGTAAAGATAACTCTAAAACAGCCTCAGAAAAAGTAGAGGCTCAAAATATCATTAGC TTAAATGACATTTTATTTAATGATACTGTTGATATACCCACTAATCCAGCCAAAAAGAATAAGGGCGATGAGGATGATGA AACCTATTATAGTTTGATAGATTTTCCCAATTTTTTATTGCAGGTTTTAAGAGTACACGTGACTCAAAATCTGACTGACA ACCCTCAAAATGACATCGTATCGCTTGATGATAAGCAGTTATTGATTGAATTTGATAATCATTTGATTGGTTCTAAGGTG ACCAATAAGGTAGCTAAAATAGAGCAGTTCCTTTACACCTTATTGAAATCAAAGTTTTTATTTGATCAATATATTATCAA GCGTAATACAGAGTCTAAGAAAGGCTATTGGACCCTTGAGCAGCTAAACAATGAGGCGTCAGGTCCTTCTTATAAACAAA ATATGCCAAAAGACTCAACTGGACCAGACTTAAATGCCAGTTTGGTTACTCTGCAAAGCGCCTTTCATGTGTCTGCACCT ACTCTTAATTCTAAATACTGGTTAAATGCCTGCTTGCAGTATCTCTATTTGACGTTTGATAAGCGTGAACAAGGTATCGA TGGCAAAGCATTTCTGAGCTATCTTGATGGGCTGGCTAAAGCATATATGCTTAGAAGGTATATCGCTCAATCTGATCGAA CCAAGCCTAATAATATCGTCAATGATTACTTTCAAGAGTTTAGTCGCCATATAAATGATAATAGTGAGATGACATTGTCC AGTCAGTCGTTATCACCTCGAACGATTGAATTTGAGAAACTGTCACAACAACTAAGATACCCTCATGTCAATGTCTTTGT ATTCAACTACTTAGATTACTTGATTTGGTTGAGTGGTAATGTTGAATCAGGGGATAAAAAGAAGTTTAGACCCTCTACAC AAGGCTCTATTGAACACTTCTTACCTCAGACCCCCATACATAAAGATGAAAAAATTGACGATAGAATCGACATTCATCGT TTTGGTAATCTGTGCCTCATCAACAGAAGTCTTAACTCTCGCGTTAGTAATCACCAGCCCTTAGCTAAAAAAGAACACTA TGATGAGTCGTTTAAAAGTCATATCGACTCACTTAAGCTATACAAAATGATTAAAGTCTTCAATCCAAAAGACAATCAAT ATCAATGGGGTTATGATCAAATCATTGAACATGAAAACGAGATGCTAAGACTTTTTGAAGGTGCTTTGAATCTCAAGATA GAAGGACGCTGA
Upstream 100 bases:
>100_bases GCAAATAACCATAAACCTAACAATGACACCAATAAAAGTGATAGCGATATTTACACGTTATTTAATTGTCTCAACTACAT AGATACGTCAGGAGAATAAT
Downstream 100 bases:
>100_bases ATCATGAGTAACGTCAGCGATATAGAAAGACTCACTCAAAACCGTGTCGTACGCTTCTTTACCGACACGCTAGGTTATCG CTATCTAGGTGACTTTAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 723; Mature: 722
Protein sequence:
>723_residues MTMNNSSVKVSSLPIKKLLTNGDQYVIPMYQRNYAWGTVEIETLIKDIIDAYNRDPNLTYYLGTLVVFEKSNTSQALFEV IDGQQRLTTLTLLAIYLHHNHHQYCHSYLEQFNQTNLYFESRPHSDYTLSLLYNRESARFAQDASMNQSIIDGYDILTKT MTYLFNGNNEVTSINEFCTFLFNKVEIARVPVPQETDLNHYFEVMNNRGEQLEKHEIIKARLLSAISSDTSADTKQIQHC KSLLDLIWNTCSRMNKYVQYGFTTDLRKKIFSSDWAHFEPKYFSDLLDFYIQDCNEQAAKKSKDNSKTASEKVEAQNIIS LNDILFNDTVDIPTNPAKKNKGDEDDETYYSLIDFPNFLLQVLRVHVTQNLTDNPQNDIVSLDDKQLLIEFDNHLIGSKV TNKVAKIEQFLYTLLKSKFLFDQYIIKRNTESKKGYWTLEQLNNEASGPSYKQNMPKDSTGPDLNASLVTLQSAFHVSAP TLNSKYWLNACLQYLYLTFDKREQGIDGKAFLSYLDGLAKAYMLRRYIAQSDRTKPNNIVNDYFQEFSRHINDNSEMTLS SQSLSPRTIEFEKLSQQLRYPHVNVFVFNYLDYLIWLSGNVESGDKKKFRPSTQGSIEHFLPQTPIHKDEKIDDRIDIHR FGNLCLINRSLNSRVSNHQPLAKKEHYDESFKSHIDSLKLYKMIKVFNPKDNQYQWGYDQIIEHENEMLRLFEGALNLKI EGR
Sequences:
>Translated_723_residues MTMNNSSVKVSSLPIKKLLTNGDQYVIPMYQRNYAWGTVEIETLIKDIIDAYNRDPNLTYYLGTLVVFEKSNTSQALFEV IDGQQRLTTLTLLAIYLHHNHHQYCHSYLEQFNQTNLYFESRPHSDYTLSLLYNRESARFAQDASMNQSIIDGYDILTKT MTYLFNGNNEVTSINEFCTFLFNKVEIARVPVPQETDLNHYFEVMNNRGEQLEKHEIIKARLLSAISSDTSADTKQIQHC KSLLDLIWNTCSRMNKYVQYGFTTDLRKKIFSSDWAHFEPKYFSDLLDFYIQDCNEQAAKKSKDNSKTASEKVEAQNIIS LNDILFNDTVDIPTNPAKKNKGDEDDETYYSLIDFPNFLLQVLRVHVTQNLTDNPQNDIVSLDDKQLLIEFDNHLIGSKV TNKVAKIEQFLYTLLKSKFLFDQYIIKRNTESKKGYWTLEQLNNEASGPSYKQNMPKDSTGPDLNASLVTLQSAFHVSAP TLNSKYWLNACLQYLYLTFDKREQGIDGKAFLSYLDGLAKAYMLRRYIAQSDRTKPNNIVNDYFQEFSRHINDNSEMTLS SQSLSPRTIEFEKLSQQLRYPHVNVFVFNYLDYLIWLSGNVESGDKKKFRPSTQGSIEHFLPQTPIHKDEKIDDRIDIHR FGNLCLINRSLNSRVSNHQPLAKKEHYDESFKSHIDSLKLYKMIKVFNPKDNQYQWGYDQIIEHENEMLRLFEGALNLKI EGR >Mature_722_residues TMNNSSVKVSSLPIKKLLTNGDQYVIPMYQRNYAWGTVEIETLIKDIIDAYNRDPNLTYYLGTLVVFEKSNTSQALFEVI DGQQRLTTLTLLAIYLHHNHHQYCHSYLEQFNQTNLYFESRPHSDYTLSLLYNRESARFAQDASMNQSIIDGYDILTKTM TYLFNGNNEVTSINEFCTFLFNKVEIARVPVPQETDLNHYFEVMNNRGEQLEKHEIIKARLLSAISSDTSADTKQIQHCK SLLDLIWNTCSRMNKYVQYGFTTDLRKKIFSSDWAHFEPKYFSDLLDFYIQDCNEQAAKKSKDNSKTASEKVEAQNIISL NDILFNDTVDIPTNPAKKNKGDEDDETYYSLIDFPNFLLQVLRVHVTQNLTDNPQNDIVSLDDKQLLIEFDNHLIGSKVT NKVAKIEQFLYTLLKSKFLFDQYIIKRNTESKKGYWTLEQLNNEASGPSYKQNMPKDSTGPDLNASLVTLQSAFHVSAPT LNSKYWLNACLQYLYLTFDKREQGIDGKAFLSYLDGLAKAYMLRRYIAQSDRTKPNNIVNDYFQEFSRHINDNSEMTLSS QSLSPRTIEFEKLSQQLRYPHVNVFVFNYLDYLIWLSGNVESGDKKKFRPSTQGSIEHFLPQTPIHKDEKIDDRIDIHRF GNLCLINRSLNSRVSNHQPLAKKEHYDESFKSHIDSLKLYKMIKVFNPKDNQYQWGYDQIIEHENEMLRLFEGALNLKIE GR
Specific function: Unknown
COG id: COG1479
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84236; Mature: 84105
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMNNSSVKVSSLPIKKLLTNGDQYVIPMYQRNYAWGTVEIETLIKDIIDAYNRDPNLTY CCCCCCCEEEECCCHHHHHCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHCCCCCEEE YLGTLVVFEKSNTSQALFEVIDGQQRLTTLTLLAIYLHHNHHQYCHSYLEQFNQTNLYFE EEEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEE SRPHSDYTLSLLYNRESARFAQDASMNQSIIDGYDILTKTMTYLFNGNNEVTSINEFCTF CCCCCCEEEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH LFNKVEIARVPVPQETDLNHYFEVMNNRGEQLEKHEIIKARLLSAISSDTSADTKQIQHC HHCCHHEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH KSLLDLIWNTCSRMNKYVQYGFTTDLRKKIFSSDWAHFEPKYFSDLLDFYIQDCNEQAAK HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KSKDNSKTASEKVEAQNIISLNDILFNDTVDIPTNPAKKNKGDEDDETYYSLIDFPNFLL CCCCCCHHHHHHHHHHHCEEHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH QVLRVHVTQNLTDNPQNDIVSLDDKQLLIEFDNHLIGSKVTNKVAKIEQFLYTLLKSKFL HHHHHHHHCCCCCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH FDQYIIKRNTESKKGYWTLEQLNNEASGPSYKQNMPKDSTGPDLNASLVTLQSAFHVSAP HHHHHHHCCCCCCCCCEEHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHCCCCC TLNSKYWLNACLQYLYLTFDKREQGIDGKAFLSYLDGLAKAYMLRRYIAQSDRTKPNNIV CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH NDYFQEFSRHINDNSEMTLSSQSLSPRTIEFEKLSQQLRYPHVNVFVFNYLDYLIWLSGN HHHHHHHHHHCCCCCCEEEECCCCCCCEEEHHHHHHHHCCCCEEEHHHHHHHHHEEECCC VESGDKKKFRPSTQGSIEHFLPQTPIHKDEKIDDRIDIHRFGNLCLINRSLNSRVSNHQP CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHCCCEEEEECCHHHHCCCCCC LAKKEHYDESFKSHIDSLKLYKMIKVFNPKDNQYQWGYDQIIEHENEMLRLFEGALNLKI CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEE EGR ECC >Mature Secondary Structure TMNNSSVKVSSLPIKKLLTNGDQYVIPMYQRNYAWGTVEIETLIKDIIDAYNRDPNLTY CCCCCCEEEECCCHHHHHCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHCCCCCEEE YLGTLVVFEKSNTSQALFEVIDGQQRLTTLTLLAIYLHHNHHQYCHSYLEQFNQTNLYFE EEEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEE SRPHSDYTLSLLYNRESARFAQDASMNQSIIDGYDILTKTMTYLFNGNNEVTSINEFCTF CCCCCCEEEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH LFNKVEIARVPVPQETDLNHYFEVMNNRGEQLEKHEIIKARLLSAISSDTSADTKQIQHC HHCCHHEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH KSLLDLIWNTCSRMNKYVQYGFTTDLRKKIFSSDWAHFEPKYFSDLLDFYIQDCNEQAAK HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KSKDNSKTASEKVEAQNIISLNDILFNDTVDIPTNPAKKNKGDEDDETYYSLIDFPNFLL CCCCCCHHHHHHHHHHHCEEHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH QVLRVHVTQNLTDNPQNDIVSLDDKQLLIEFDNHLIGSKVTNKVAKIEQFLYTLLKSKFL HHHHHHHHCCCCCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH FDQYIIKRNTESKKGYWTLEQLNNEASGPSYKQNMPKDSTGPDLNASLVTLQSAFHVSAP HHHHHHHCCCCCCCCCEEHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHCCCCC TLNSKYWLNACLQYLYLTFDKREQGIDGKAFLSYLDGLAKAYMLRRYIAQSDRTKPNNIV CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH NDYFQEFSRHINDNSEMTLSSQSLSPRTIEFEKLSQQLRYPHVNVFVFNYLDYLIWLSGN HHHHHHHHHHCCCCCCEEEECCCCCCCEEEHHHHHHHHCCCCEEEHHHHHHHHHEEECCC VESGDKKKFRPSTQGSIEHFLPQTPIHKDEKIDDRIDIHRFGNLCLINRSLNSRVSNHQP CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHCCCEEEEECCHHHHCCCCCC LAKKEHYDESFKSHIDSLKLYKMIKVFNPKDNQYQWGYDQIIEHENEMLRLFEGALNLKI CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEE EGR ECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA