| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93005756
Identifier: 93005756
GI number: 93005756
Start: 1099405
End: 1101048
Strand: Direct
Name: 93005756
Synonym: Pcryo_0928
Alternate gene names: NA
Gene position: 1099405-1101048 (Clockwise)
Preceding gene: 93005755
Following gene: 93005757
Centisome position: 35.93
GC content: 33.52
Gene sequence:
>1644_bases ATGCGTTTAGATAGAGTGTCTGGTGCTCCCTTGGATAAGATCTATTCTTTCTCTGATTTACCTACCATGCATACTTTTGA TGCTGCTGGTATTAATGTTGACCACCTACTTCTTTTGCAGTATACGCTTTCCAATAATTTTGTAGTTGGTGCTGAGTTTG CTATTGCTAATTTATACGATGATGTTTTTTTAAAAATTGAGTCTCTTTATGCTGAAGCTGCTGGATTTGGGGGTGACGGG CTAGCTGTTATTAGGTACCTAGAGACTACTGATATTGTGCAAGTTTCTGAAGAGTTGTCTAAGACAGTTGTCAATGACTA CTTTAACTACTGTGTGGATGTTAATGATCGCTATCAGCCAAAAATATTTATCAACATGAAAGAGCAGCTCAATATCTTTC TAAAAAACCTGAGTTTTATTCAAAAGCTGCACTCTAACTCATATTTTTATAATGCTTCTAAAAAAACTATTCTGGATGAG TCAGGTTTAGAAGATGGGTTAGAGCTTAGCGATGATATAGAAGCTGACATAGAGCGCAGTGCTCATGAATCTTATATTGA AGCTTTGAATGCTATTAATAAAGATGTTTGCGTGTACATTATACTTTGGTTACATGCGTATAGATTTTCGCAGGCAAGGA TAGAGTGTTCGAAAAATAAGGAAAATATAGCTTTTTCGCATAGGTATTATGGTTGGTCACAACCTCTCTACAGTCTGAAT GAAGATTTTCAAATAGAGTTTAAGACTAATTTTGGATATGGTTATTCAAGCTATTTCTACTTGGTAATGTACTACAAAGG AATACAGATATTTAACTTTCTTGATTGGGTGAATTACGGTATTGCGGATCTTTCACAGATGCACAAGTATTCTATAAAAT ACACTGAGGAGCCTACGGACGATGAAAAAGAGCTGGGACAGACGAACAATAAAAATCAAACTATTAGTAATGAACTTTGG GTGGAAGCAGTAGAAGATGCTAAAGAAGCCTGTAATTTATATTTAAGAGAGGAGGATGCATTTATAAGGAAGCACATTAT AGATAATCTGGGTGGTATGGTATCGAGATTGGAGAAAATAATAGATACAAGCGATGCTGAAATAAATAGTAAGTATAGAA GTTCTGCATATAAGTTCAGTAGTTATTGCTTCAGTAAAGAAGAAATAATAAAAGTAAAGTCGATGAACGTGAAGGGTTAT ATGATAAGTGGAGTATTAGGCTTTATAAATCAGATACTTAAATTGGAAGAAGTTATTTCAGTAAAGTCTTATTTAGAAAG AATATGGTCTTTAAATAGAAAATTAAAACCAATGTTAGAATTAGAAAGTATAAGAAATAAAGACATGAAAGCAAGGATAG AGTCTGAGGTAAAAAACACTAAAGATAGGATGATTGTTGTATGGACAGTGGGCGACGGTTCTGGTTGTTTAAGAGACCTA ACAAATATGAAGAAAAAATCTGGTTTAAGTTCTGATGTACAAGAAGTATTTGATAGATTACAAAAAGAGCATGACGATCT ATCTTTGAAAAATAAAGATATAATGGAAGATTATGACAACGTCAATAAACTCTTGAGAAATATTGATAGATATACTCTAA ACATAGAGCAGTACTTCTCTAAGCAGTACTTCTCTAAGCAGTAG
Upstream 100 bases:
>100_bases ATGAATAATGACTATAGCAGATAACGTTTAACAGTCTTTTGGTAAGCTTTATACTTTGGCTATATTTATTATTCTTGTTG TTACACGTGAGGTTTTTAAA
Downstream 100 bases:
>100_bases TTTGAATATGAAGTTTATAATTCAGCTTTATCATAAATTAGTCACACTAATACCAAGAATAGGACGTCTAACTATGTTTA AAAGTCTTACAAAATTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MRLDRVSGAPLDKIYSFSDLPTMHTFDAAGINVDHLLLLQYTLSNNFVVGAEFAIANLYDDVFLKIESLYAEAAGFGGDG LAVIRYLETTDIVQVSEELSKTVVNDYFNYCVDVNDRYQPKIFINMKEQLNIFLKNLSFIQKLHSNSYFYNASKKTILDE SGLEDGLELSDDIEADIERSAHESYIEALNAINKDVCVYIILWLHAYRFSQARIECSKNKENIAFSHRYYGWSQPLYSLN EDFQIEFKTNFGYGYSSYFYLVMYYKGIQIFNFLDWVNYGIADLSQMHKYSIKYTEEPTDDEKELGQTNNKNQTISNELW VEAVEDAKEACNLYLREEDAFIRKHIIDNLGGMVSRLEKIIDTSDAEINSKYRSSAYKFSSYCFSKEEIIKVKSMNVKGY MISGVLGFINQILKLEEVISVKSYLERIWSLNRKLKPMLELESIRNKDMKARIESEVKNTKDRMIVVWTVGDGSGCLRDL TNMKKKSGLSSDVQEVFDRLQKEHDDLSLKNKDIMEDYDNVNKLLRNIDRYTLNIEQYFSKQYFSKQ
Sequences:
>Translated_547_residues MRLDRVSGAPLDKIYSFSDLPTMHTFDAAGINVDHLLLLQYTLSNNFVVGAEFAIANLYDDVFLKIESLYAEAAGFGGDG LAVIRYLETTDIVQVSEELSKTVVNDYFNYCVDVNDRYQPKIFINMKEQLNIFLKNLSFIQKLHSNSYFYNASKKTILDE SGLEDGLELSDDIEADIERSAHESYIEALNAINKDVCVYIILWLHAYRFSQARIECSKNKENIAFSHRYYGWSQPLYSLN EDFQIEFKTNFGYGYSSYFYLVMYYKGIQIFNFLDWVNYGIADLSQMHKYSIKYTEEPTDDEKELGQTNNKNQTISNELW VEAVEDAKEACNLYLREEDAFIRKHIIDNLGGMVSRLEKIIDTSDAEINSKYRSSAYKFSSYCFSKEEIIKVKSMNVKGY MISGVLGFINQILKLEEVISVKSYLERIWSLNRKLKPMLELESIRNKDMKARIESEVKNTKDRMIVVWTVGDGSGCLRDL TNMKKKSGLSSDVQEVFDRLQKEHDDLSLKNKDIMEDYDNVNKLLRNIDRYTLNIEQYFSKQYFSKQ >Mature_547_residues MRLDRVSGAPLDKIYSFSDLPTMHTFDAAGINVDHLLLLQYTLSNNFVVGAEFAIANLYDDVFLKIESLYAEAAGFGGDG LAVIRYLETTDIVQVSEELSKTVVNDYFNYCVDVNDRYQPKIFINMKEQLNIFLKNLSFIQKLHSNSYFYNASKKTILDE SGLEDGLELSDDIEADIERSAHESYIEALNAINKDVCVYIILWLHAYRFSQARIECSKNKENIAFSHRYYGWSQPLYSLN EDFQIEFKTNFGYGYSSYFYLVMYYKGIQIFNFLDWVNYGIADLSQMHKYSIKYTEEPTDDEKELGQTNNKNQTISNELW VEAVEDAKEACNLYLREEDAFIRKHIIDNLGGMVSRLEKIIDTSDAEINSKYRSSAYKFSSYCFSKEEIIKVKSMNVKGY MISGVLGFINQILKLEEVISVKSYLERIWSLNRKLKPMLELESIRNKDMKARIESEVKNTKDRMIVVWTVGDGSGCLRDL TNMKKKSGLSSDVQEVFDRLQKEHDDLSLKNKDIMEDYDNVNKLLRNIDRYTLNIEQYFSKQYFSKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63611; Mature: 63611
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLDRVSGAPLDKIYSFSDLPTMHTFDAAGINVDHLLLLQYTLSNNFVVGAEFAIANLYD CCCCCCCCCCHHHHCCCCCCCCCEECCCCCCCHHHEEEEEEECCCCEEEECHHHHHHHHH DVFLKIESLYAEAAGFGGDGLAVIRYLETTDIVQVSEELSKTVVNDYFNYCVDVNDRYQP HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC KIFINMKEQLNIFLKNLSFIQKLHSNSYFYNASKKTILDESGLEDGLELSDDIEADIERS EEEEEEHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH AHESYIEALNAINKDVCVYIILWLHAYRFSQARIECSKNKENIAFSHRYYGWSQPLYSLN HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCCCCHHCCC EDFQIEFKTNFGYGYSSYFYLVMYYKGIQIFNFLDWVNYGIADLSQMHKYSIKYTEEPTD CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCEEECCCCCC DEKELGQTNNKNQTISNELWVEAVEDAKEACNLYLREEDAFIRKHIIDNLGGMVSRLEKI CHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHH IDTSDAEINSKYRSSAYKFSSYCFSKEEIIKVKSMNVKGYMISGVLGFINQILKLEEVIS HCCCCCHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH VKSYLERIWSLNRKLKPMLELESIRNKDMKARIESEVKNTKDRMIVVWTVGDGSGCLRDL HHHHHHHHHHHCHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHH TNMKKKSGLSSDVQEVFDRLQKEHDDLSLKNKDIMEDYDNVNKLLRNIDRYTLNIEQYFS HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEHHHHHH KQYFSKQ HHHCCCC >Mature Secondary Structure MRLDRVSGAPLDKIYSFSDLPTMHTFDAAGINVDHLLLLQYTLSNNFVVGAEFAIANLYD CCCCCCCCCCHHHHCCCCCCCCCEECCCCCCCHHHEEEEEEECCCCEEEECHHHHHHHHH DVFLKIESLYAEAAGFGGDGLAVIRYLETTDIVQVSEELSKTVVNDYFNYCVDVNDRYQP HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC KIFINMKEQLNIFLKNLSFIQKLHSNSYFYNASKKTILDESGLEDGLELSDDIEADIERS EEEEEEHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH AHESYIEALNAINKDVCVYIILWLHAYRFSQARIECSKNKENIAFSHRYYGWSQPLYSLN HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCCCCHHCCC EDFQIEFKTNFGYGYSSYFYLVMYYKGIQIFNFLDWVNYGIADLSQMHKYSIKYTEEPTD CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCEEECCCCCC DEKELGQTNNKNQTISNELWVEAVEDAKEACNLYLREEDAFIRKHIIDNLGGMVSRLEKI CHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHH IDTSDAEINSKYRSSAYKFSSYCFSKEEIIKVKSMNVKGYMISGVLGFINQILKLEEVIS HCCCCCHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH VKSYLERIWSLNRKLKPMLELESIRNKDMKARIESEVKNTKDRMIVVWTVGDGSGCLRDL HHHHHHHHHHHCHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHH TNMKKKSGLSSDVQEVFDRLQKEHDDLSLKNKDIMEDYDNVNKLLRNIDRYTLNIEQYFS HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEHHHHHH KQYFSKQ HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA