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The map label for this gene is insF1 [C]

Identifier: 93005754

GI number: 93005754

Start: 1098350

End: 1098706

Strand: Direct

Name: insF1 [C]

Synonym: Pcryo_0926

Alternate gene names: 93005754

Gene position: 1098350-1098706 (Clockwise)

Preceding gene: 93005753

Following gene: 93005755

Centisome position: 35.9

GC content: 45.1

Gene sequence:

>357_bases
ATGTGTCGCGTATTAGATGTCAAGCCATCAAGCTATTACAACTGGATAAATCGTGGTGTCAGTAATCAGCAGATCCACCG
CAACCAGTGTGAGCTGCTGGTTCGCGTGGCTCATGATGAGACTAAGCAGCGCTATGGCTGTGAGCGATTGCATGCTCATC
TTGCAGGGCAAGGCCATCATATCAGTCAATACATGGTCAGACGAATCAAAAAGGAATACGGCATTGTTTGCCGTCGTCAC
AAGCGTTTTAAAGTTACTACCAACTCAAACCATAACAAGCTTATCTATCCAAACCTGCTCGATCAAAAATTTGATACCAG
TCGTCCTAACGAAGCTTGGGTTAGTGACATCACTTAG

Upstream 100 bases:

>100_bases
AGCGAGAGATATTAAAAAAGGCCACGGCGTACTTCGCGAAACACAGTTGATGAAGTACGTCTTTATCAAGGATAACCAGA
AGATATTTAGCATTACCTGT

Downstream 100 bases:

>100_bases
ATATGGACAGATGAGGGTTGGCTATACTTAGCAGGCGTTAAAGACCTCTACACTAAAGAGATCATCGGCTATGCTATCCA
CAAGCGTATGACAGCAGATT

Product: IS30 family transposase

Products: NA

Alternate protein names: ISO-S3 31 kDa protein [H]

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MCRVLDVKPSSYYNWINRGVSNQQIHRNQCELLVRVAHDETKQRYGCERLHAHLAGQGHHISQYMVRRIKKEYGIVCRRH
KRFKVTTNSNHNKLIYPNLLDQKFDTSRPNEAWVSDIT

Sequences:

>Translated_118_residues
MCRVLDVKPSSYYNWINRGVSNQQIHRNQCELLVRVAHDETKQRYGCERLHAHLAGQGHHISQYMVRRIKKEYGIVCRRH
KRFKVTTNSNHNKLIYPNLLDQKFDTSRPNEAWVSDIT
>Mature_118_residues
MCRVLDVKPSSYYNWINRGVSNQQIHRNQCELLVRVAHDETKQRYGCERLHAHLAGQGHHISQYMVRRIKKEYGIVCRRH
KRFKVTTNSNHNKLIYPNLLDQKFDTSRPNEAWVSDIT

Specific function: Involved in the transposition of the insertion sequence is3 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1788405, Length=120, Percent_Identity=35, Blast_Score=76, Evalue=5e-16,
Organism=Escherichia coli, GI1787263, Length=120, Percent_Identity=35, Blast_Score=76, Evalue=5e-16,
Organism=Escherichia coli, GI1786753, Length=120, Percent_Identity=35, Blast_Score=76, Evalue=5e-16,
Organism=Escherichia coli, GI1786570, Length=120, Percent_Identity=35, Blast_Score=76, Evalue=5e-16,
Organism=Escherichia coli, GI1786490, Length=120, Percent_Identity=35, Blast_Score=76, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 14046; Mature: 14046

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: PS50835 IG_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCRVLDVKPSSYYNWINRGVSNQQIHRNQCELLVRVAHDETKQRYGCERLHAHLAGQGHH
CCEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
ISQYMVRRIKKEYGIVCRRHKRFKVTTNSNHNKLIYPNLLDQKFDTSRPNEAWVSDIT
HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MCRVLDVKPSSYYNWINRGVSNQQIHRNQCELLVRVAHDETKQRYGCERLHAHLAGQGHH
CCEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
ISQYMVRRIKKEYGIVCRRHKRFKVTTNSNHNKLIYPNLLDQKFDTSRPNEAWVSDIT
HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]