| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is 93005745
Identifier: 93005745
GI number: 93005745
Start: 1087065
End: 1087739
Strand: Reverse
Name: 93005745
Synonym: Pcryo_0917
Alternate gene names: NA
Gene position: 1087739-1087065 (Counterclockwise)
Preceding gene: 93005746
Following gene: 93005743
Centisome position: 35.55
GC content: 40.89
Gene sequence:
>675_bases ATGTCTGATGTTGTGTTGAACCGTTACCAATCTCAAAAGTCTGAATTCTCCGACCCTTTTCGCTTACGTATGCACCGTTC TCTGAGCTGGCTTGCTAAAGCGGTCAGTGTTAATGATGATGATATTCGCTTTATTACCCTATGGATAGCCTTTAATGCCG CTTACGCTCGTGAAGTGGCGCTATTTTCGAGTAGCTCTGAGCGTAGTGAATTTAGGCGATTTTTACAATTAATATGCCGA TTAGATACTGACCAGCAAATTTATAAACTAGTGTGGGAAACCTATTCTGGCAGCATTCGCATACTGTTAGAAAACCAGTA TACTTTTCAGCCATTTTGGGACTACCATAACGGGCAGATCAGTCAACAGGCTTGGGAAGAGGACTTTAAACGCGCAAAAG ATAAAGTACATCGTGCATTGAGCAATAAGGATACCGATACAGTACTGGCTGTAGTGTTCGACCGCTTATATACGTTACGT AATCAAATTATTCATGGCGGTGCTACGCATAATGGTAAAGTAAATCGGGCTCAAATCAAGGATAGTGGCGCTATTTTGTC CTCTATCTTGCCATTGATGCTAGAGATTATGATGGCTCATCATAGCAAGATGGATTGGGGCAAACCTTTCTATCCAGTAA TAGATAAAGAAACATATATAGTCAGCTCAATATAA
Upstream 100 bases:
>100_bases TATAGCAGTTATTCTTCACCCTCAGCAGAAAGTGACTATGCAAGACGACTTTCTATAAGTCGGTTTTTAATCATTAAAAA CTATATATGGTACTAATTAA
Downstream 100 bases:
>100_bases AACTGGAACATCCTATATGATAAAATTATTTTAGGCAGATTATTCTCTATCTAGCCTTGGCATAGAAATTTATACTGTGC CCATTTTTTCGACTGAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MSDVVLNRYQSQKSEFSDPFRLRMHRSLSWLAKAVSVNDDDIRFITLWIAFNAAYAREVALFSSSSERSEFRRFLQLICR LDTDQQIYKLVWETYSGSIRILLENQYTFQPFWDYHNGQISQQAWEEDFKRAKDKVHRALSNKDTDTVLAVVFDRLYTLR NQIIHGGATHNGKVNRAQIKDSGAILSSILPLMLEIMMAHHSKMDWGKPFYPVIDKETYIVSSI
Sequences:
>Translated_224_residues MSDVVLNRYQSQKSEFSDPFRLRMHRSLSWLAKAVSVNDDDIRFITLWIAFNAAYAREVALFSSSSERSEFRRFLQLICR LDTDQQIYKLVWETYSGSIRILLENQYTFQPFWDYHNGQISQQAWEEDFKRAKDKVHRALSNKDTDTVLAVVFDRLYTLR NQIIHGGATHNGKVNRAQIKDSGAILSSILPLMLEIMMAHHSKMDWGKPFYPVIDKETYIVSSI >Mature_223_residues SDVVLNRYQSQKSEFSDPFRLRMHRSLSWLAKAVSVNDDDIRFITLWIAFNAAYAREVALFSSSSERSEFRRFLQLICRL DTDQQIYKLVWETYSGSIRILLENQYTFQPFWDYHNGQISQQAWEEDFKRAKDKVHRALSNKDTDTVLAVVFDRLYTLRN QIIHGGATHNGKVNRAQIKDSGAILSSILPLMLEIMMAHHSKMDWGKPFYPVIDKETYIVSSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26207; Mature: 26076
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDVVLNRYQSQKSEFSDPFRLRMHRSLSWLAKAVSVNDDDIRFITLWIAFNAAYAREVA CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHHHHHH LFSSSSERSEFRRFLQLICRLDTDQQIYKLVWETYSGSIRILLENQYTFQPFWDYHNGQI HHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEECCEECCCCCCCCCCCC SQQAWEEDFKRAKDKVHRALSNKDTDTVLAVVFDRLYTLRNQIIHGGATHNGKVNRAQIK CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCC DSGAILSSILPLMLEIMMAHHSKMDWGKPFYPVIDKETYIVSSI CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCEEEEECC >Mature Secondary Structure SDVVLNRYQSQKSEFSDPFRLRMHRSLSWLAKAVSVNDDDIRFITLWIAFNAAYAREVA CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHHHHHH LFSSSSERSEFRRFLQLICRLDTDQQIYKLVWETYSGSIRILLENQYTFQPFWDYHNGQI HHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEECCEECCCCCCCCCCCC SQQAWEEDFKRAKDKVHRALSNKDTDTVLAVVFDRLYTLRNQIIHGGATHNGKVNRAQIK CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCC DSGAILSSILPLMLEIMMAHHSKMDWGKPFYPVIDKETYIVSSI CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA