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The map label for this gene is yfmJ [H]

Identifier: 93005690

GI number: 93005690

Start: 1020230

End: 1021237

Strand: Direct

Name: yfmJ [H]

Synonym: Pcryo_0862

Alternate gene names: 93005690

Gene position: 1020230-1021237 (Clockwise)

Preceding gene: 93005689

Following gene: 93005691

Centisome position: 33.34

GC content: 45.24

Gene sequence:

>1008_bases
ATGACAACAATGAATAAGCAGTGGCGCTTAAAAGAAAGACCTATTGGCGCGCCGAGTGCAGAGACGTGGGATTATACTGA
GTCAGAACTACCGACTATCACAGACGGTCAGTTACTGATAAAAATTGAATATATCTCGATGGATCCAGCGATGCGTGGCT
GGTTAAACGATGCTAAATCTTATATCGCACCGGTACAGATTGGTGAAGTCATGCGCGCTGGTACTGTGGGCGAAGTCATT
GAAAGTAAGCATGAGAAATTTGCCGTTGGCGATTATGTTGTAGGTCATAACGGCGTGCAATCGTATGCGGTCAGCGATGG
CACAGGGCTACATAAAGTCGATCCAAACCTTGCACCTTTATCTTATTACTTAGGTGTACTCGGTATGCCGGGTATGACCG
GTTACTTTGGCTTATTGAAAACAGGCAAGCCAAAAGCTGGCGAGACGGTGGTCGTCTCTGGGGCTGCGGGTGCGGTTGGT
AGCTTAGTTGGGCAAATTGCCAAACTAAAAGGCTGCCGTGTCGTTGGTATCGCAGGCGGTGCTGAGAAATGTAAATTCTT
AGTCGATGAGTTGGGTTTTGATGCTGCAGTAGATTATAAAAATGAGGATGTCAAAAAAGGCTTAAAGCAAGCTTGTCCAA
ACGGTGTCGATGTCTTCTTTGACAACGTAGGCGGCGATATCTTAAATGACGTCCTTACCCAAATTAATCTGCGCGCGCGT
ATCGTGATTTGCGGTGCGATTAGCCAATATAACAACACCACAGCGGTAAAAGGGCCGTCAAACTATCTGTCATTATTGGT
CAATCGTGCCCGTATGGAAGGCATCGTGGTCTTTGATAATATCAAAGAATATCCAATCGCGATGAAAGAGATTGCTGGCT
GGATTCAGTCAGGTGATATGAAAGTAAAAGATCATATCGTTGAAGGTATCGAGACGTTCCCTGATACTTTGATGATGCTC
TTTAAAGGTGAAAACTTCGGCAAACTGGTACTTAAGGTAGAGGGATAA

Upstream 100 bases:

>100_bases
ACGACAATGCGGTATGTACCAATATGCAAGCAGAATGGTTTTAAGAGATTTTGAATCAGTTTTGATATTAATAATAAATA
CAACTTTAAAGGAATAAATA

Downstream 100 bases:

>100_bases
ATCATGACACTGAATACAAATGGAATTGCATCAGACGTAGCCAGTAACGTTTCTGGTAAACGTATTTTAATCACGGGCGG
TGCGTCTGGCATCGGTGCGG

Product: zinc-binding alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MTTMNKQWRLKERPIGAPSAETWDYTESELPTITDGQLLIKIEYISMDPAMRGWLNDAKSYIAPVQIGEVMRAGTVGEVI
ESKHEKFAVGDYVVGHNGVQSYAVSDGTGLHKVDPNLAPLSYYLGVLGMPGMTGYFGLLKTGKPKAGETVVVSGAAGAVG
SLVGQIAKLKGCRVVGIAGGAEKCKFLVDELGFDAAVDYKNEDVKKGLKQACPNGVDVFFDNVGGDILNDVLTQINLRAR
IVICGAISQYNNTTAVKGPSNYLSLLVNRARMEGIVVFDNIKEYPIAMKEIAGWIQSGDMKVKDHIVEGIETFPDTLMML
FKGENFGKLVLKVEG

Sequences:

>Translated_335_residues
MTTMNKQWRLKERPIGAPSAETWDYTESELPTITDGQLLIKIEYISMDPAMRGWLNDAKSYIAPVQIGEVMRAGTVGEVI
ESKHEKFAVGDYVVGHNGVQSYAVSDGTGLHKVDPNLAPLSYYLGVLGMPGMTGYFGLLKTGKPKAGETVVVSGAAGAVG
SLVGQIAKLKGCRVVGIAGGAEKCKFLVDELGFDAAVDYKNEDVKKGLKQACPNGVDVFFDNVGGDILNDVLTQINLRAR
IVICGAISQYNNTTAVKGPSNYLSLLVNRARMEGIVVFDNIKEYPIAMKEIAGWIQSGDMKVKDHIVEGIETFPDTLMML
FKGENFGKLVLKVEG
>Mature_334_residues
TTMNKQWRLKERPIGAPSAETWDYTESELPTITDGQLLIKIEYISMDPAMRGWLNDAKSYIAPVQIGEVMRAGTVGEVIE
SKHEKFAVGDYVVGHNGVQSYAVSDGTGLHKVDPNLAPLSYYLGVLGMPGMTGYFGLLKTGKPKAGETVVVSGAAGAVGS
LVGQIAKLKGCRVVGIAGGAEKCKFLVDELGFDAAVDYKNEDVKKGLKQACPNGVDVFFDNVGGDILNDVLTQINLRARI
VICGAISQYNNTTAVKGPSNYLSLLVNRARMEGIVVFDNIKEYPIAMKEIAGWIQSGDMKVKDHIVEGIETFPDTLMMLF
KGENFGKLVLKVEG

Specific function: Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds (Potential) [H]

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226059159, Length=333, Percent_Identity=39.6396396396396, Blast_Score=235, Evalue=4e-62,
Organism=Homo sapiens, GI226059133, Length=333, Percent_Identity=39.6396396396396, Blast_Score=235, Evalue=4e-62,
Organism=Homo sapiens, GI226246682, Length=338, Percent_Identity=39.0532544378698, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI226246680, Length=338, Percent_Identity=39.0532544378698, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI22748929, Length=338, Percent_Identity=39.0532544378698, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI226056130, Length=296, Percent_Identity=39.8648648648649, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI28557745, Length=326, Percent_Identity=26.9938650306748, Blast_Score=98, Evalue=1e-20,
Organism=Escherichia coli, GI226510941, Length=339, Percent_Identity=43.3628318584071, Blast_Score=297, Evalue=8e-82,
Organism=Caenorhabditis elegans, GI133901710, Length=339, Percent_Identity=32.4483775811209, Blast_Score=169, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI133901712, Length=339, Percent_Identity=32.4483775811209, Blast_Score=169, Evalue=2e-42,
Organism=Saccharomyces cerevisiae, GI6323504, Length=363, Percent_Identity=34.7107438016529, Blast_Score=171, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36174; Mature: 36043

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTMNKQWRLKERPIGAPSAETWDYTESELPTITDGQLLIKIEYISMDPAMRGWLNDAKS
CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEECCEEEEEEEEEECCHHHHHHHHHHHH
YIAPVQIGEVMRAGTVGEVIESKHEKFAVGDYVVGHNGVQSYAVSDGTGLHKVDPNLAPL
HCCHHHHHHHHHCCCHHHHHHHHCCEEEECCEEECCCCCCEEEECCCCCCEECCCCCCHH
SYYLGVLGMPGMTGYFGLLKTGKPKAGETVVVSGAAGAVGSLVGQIAKLKGCRVVGIAGG
HHHHHHHCCCCCCHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCC
AEKCKFLVDELGFDAAVDYKNEDVKKGLKQACPNGVDVFFDNVGGDILNDVLTQINLRAR
HHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCEEE
IVICGAISQYNNTTAVKGPSNYLSLLVNRARMEGIVVFDNIKEYPIAMKEIAGWIQSGDM
EEEEEEHHCCCCCEEECCCHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHCCCC
KVKDHIVEGIETFPDTLMMLFKGENFGKLVLKVEG
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC
>Mature Secondary Structure 
TTMNKQWRLKERPIGAPSAETWDYTESELPTITDGQLLIKIEYISMDPAMRGWLNDAKS
CCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEECCEEEEEEEEEECCHHHHHHHHHHHH
YIAPVQIGEVMRAGTVGEVIESKHEKFAVGDYVVGHNGVQSYAVSDGTGLHKVDPNLAPL
HCCHHHHHHHHHCCCHHHHHHHHCCEEEECCEEECCCCCCEEEECCCCCCEECCCCCCHH
SYYLGVLGMPGMTGYFGLLKTGKPKAGETVVVSGAAGAVGSLVGQIAKLKGCRVVGIAGG
HHHHHHHCCCCCCHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCC
AEKCKFLVDELGFDAAVDYKNEDVKKGLKQACPNGVDVFFDNVGGDILNDVLTQINLRAR
HHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCEEE
IVICGAISQYNNTTAVKGPSNYLSLLVNRARMEGIVVFDNIKEYPIAMKEIAGWIQSGDM
EEEEEEHHCCCCCEEECCCHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHCCCC
KVKDHIVEGIETFPDTLMMLFKGENFGKLVLKVEG
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]