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The map label for this gene is ydgI [H]

Identifier: 93005634

GI number: 93005634

Start: 948555

End: 949367

Strand: Reverse

Name: ydgI [H]

Synonym: Pcryo_0804

Alternate gene names: 93005634

Gene position: 949367-948555 (Counterclockwise)

Preceding gene: 93005635

Following gene: 93005633

Centisome position: 31.03

GC content: 45.26

Gene sequence:

>813_bases
ATGCAATCGATAATGCCTGAAGCTGATTACTCATTCCTCAGCATGGATCCTACTATGAATTCTAATACTGGCAATAAAGA
CATTCTTGCGACGCCTAGTCACACCCCGCAGCTGCAAGCATTTTGTGAGGTGGTAGAGTCGCGCCGTTCGGTACGCCGAT
TTACAGATGCGCCGATACCTGACGATGTATTAGCAGACTGCCTGCGTTTGGCGATGCTTGCCCCAAACTCAAGCAATCTT
CAGCCATGGGAATTTTATGTTATTGATGATGCTGGTAAGCGTAAGCGCGCGGTCAAAAACTGTATGAATCAAAACGCAGC
AAAAACCTCAGCACGTTTAATCGCTGTCGTTGCTCGTACTGACGTTTGGCATGACCATGCAAAGCAAATATTGCGTGAAT
ACCCTGATATGCCGGTGCCAAAAAAAGTCAAAGACTACTACAACAAAGTCGTTGCGTTAGATTTTTTGCGTGGACCTGCT
AACGTGGTATCAGTAGCCAAATGGAGCGCCATTCAAGTAGTCAGACGTATAAAGGGTCCTATAAAATCGCCTTATTATAC
CTTTGAAGATACCAAAAATTGGGCAACCAATAACACCGCATTAGCGGCTGGAAACCTGATGCTTGCCTTACGCGCGCATG
GATTTGATAGCTGCCCGATGGGCGGTTTCGATGAGCCTGCTATGAAGCGCTTATTAAAACTGAGTGATAATCACCATATT
GTTATGATGATTGGTGCTGGGGAGCGTGCTGATAATGGCGTTTACAATACCCAGTTCCGCTTTGAGCAAGATCAATTTGT
ACATTACGTATAA

Upstream 100 bases:

>100_bases
TTTCAATGCAGTATTTTCAAGACACTCAGCACTCAATTTATGACGCCCAACTGCTATCTGATTTATTCATATTAATCACT
CGTCAGACATTATTGAAGAT

Downstream 100 bases:

>100_bases
CCTGCTACCACCCTATTTTTATTATAGCCATCTCCTTTATTCCTATATTTACCAAGGATCACCATGACTATCTCTCAAAA
TCCAGCACTTGATACGTTTG

Product: nitroreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MQSIMPEADYSFLSMDPTMNSNTGNKDILATPSHTPQLQAFCEVVESRRSVRRFTDAPIPDDVLADCLRLAMLAPNSSNL
QPWEFYVIDDAGKRKRAVKNCMNQNAAKTSARLIAVVARTDVWHDHAKQILREYPDMPVPKKVKDYYNKVVALDFLRGPA
NVVSVAKWSAIQVVRRIKGPIKSPYYTFEDTKNWATNNTALAAGNLMLALRAHGFDSCPMGGFDEPAMKRLLKLSDNHHI
VMMIGAGERADNGVYNTQFRFEQDQFVHYV

Sequences:

>Translated_270_residues
MQSIMPEADYSFLSMDPTMNSNTGNKDILATPSHTPQLQAFCEVVESRRSVRRFTDAPIPDDVLADCLRLAMLAPNSSNL
QPWEFYVIDDAGKRKRAVKNCMNQNAAKTSARLIAVVARTDVWHDHAKQILREYPDMPVPKKVKDYYNKVVALDFLRGPA
NVVSVAKWSAIQVVRRIKGPIKSPYYTFEDTKNWATNNTALAAGNLMLALRAHGFDSCPMGGFDEPAMKRLLKLSDNHHI
VMMIGAGERADNGVYNTQFRFEQDQFVHYV
>Mature_270_residues
MQSIMPEADYSFLSMDPTMNSNTGNKDILATPSHTPQLQAFCEVVESRRSVRRFTDAPIPDDVLADCLRLAMLAPNSSNL
QPWEFYVIDDAGKRKRAVKNCMNQNAAKTSARLIAVVARTDVWHDHAKQILREYPDMPVPKKVKDYYNKVVALDFLRGPA
NVVSVAKWSAIQVVRRIKGPIKSPYYTFEDTKNWATNNTALAAGNLMLALRAHGFDSCPMGGFDEPAMKRLLKLSDNHHI
VMMIGAGERADNGVYNTQFRFEQDQFVHYV

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 30455; Mature: 30455

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSIMPEADYSFLSMDPTMNSNTGNKDILATPSHTPQLQAFCEVVESRRSVRRFTDAPIP
CCCCCCCCCCCEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
DDVLADCLRLAMLAPNSSNLQPWEFYVIDDAGKRKRAVKNCMNQNAAKTSARLIAVVART
HHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHEEEEEHHH
DVWHDHAKQILREYPDMPVPKKVKDYYNKVVALDFLRGPANVVSVAKWSAIQVVRRIKGP
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
IKSPYYTFEDTKNWATNNTALAAGNLMLALRAHGFDSCPMGGFDEPAMKRLLKLSDNHHI
CCCCCEEECCCCCCCCCCCEEEECCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEE
VMMIGAGERADNGVYNTQFRFEQDQFVHYV
EEEEECCCCCCCCEECCEEEECCCHHEECC
>Mature Secondary Structure
MQSIMPEADYSFLSMDPTMNSNTGNKDILATPSHTPQLQAFCEVVESRRSVRRFTDAPIP
CCCCCCCCCCCEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
DDVLADCLRLAMLAPNSSNLQPWEFYVIDDAGKRKRAVKNCMNQNAAKTSARLIAVVART
HHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHEEEEEHHH
DVWHDHAKQILREYPDMPVPKKVKDYYNKVVALDFLRGPANVVSVAKWSAIQVVRRIKGP
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
IKSPYYTFEDTKNWATNNTALAAGNLMLALRAHGFDSCPMGGFDEPAMKRLLKLSDNHHI
CCCCCEEECCCCCCCCCCCEEEECCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEE
VMMIGAGERADNGVYNTQFRFEQDQFVHYV
EEEEECCCCCCCCEECCEEEECCCHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]