| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is 93005616
Identifier: 93005616
GI number: 93005616
Start: 925227
End: 926222
Strand: Reverse
Name: 93005616
Synonym: Pcryo_0786
Alternate gene names: NA
Gene position: 926222-925227 (Counterclockwise)
Preceding gene: 93005620
Following gene: 93005614
Centisome position: 30.27
GC content: 41.67
Gene sequence:
>996_bases ATGGCTGACTTAAGTTTGAGTATTTTCATGACCATTAATTATCAATATAAAAACATCCAATCTCCTACCAAAATCACCTT AACTGATGAGCAATCAGCTGGTCACGGTGACCATTGGCGTATTCTGACTGATGACATGAGTCATGATGTACCTGAATGGT TACAACAGATGATTGAAAAAGCAGCGATGCCTAAAGGCCTTAATACCGATGTCAGTGCCAAAGACAGCTGTTTATTGCTA TCTGAGAACCAACCTTGTCATATCAATCAAGTACTGGCAATGAAGAATGGCAAGCCTGAATGCTTTATCAATGCCTATCC TTGTGTCGACAGCCCATATGGATTGAGCTGTAAAATCGAGCGTATGATTGTCAATGACAATTCACACGATGCCGTATTAC GCTTACGTACCACTGATGGCAGCATCATCTATGCTTTTGATCAGCTATATACTGCGAATCGCCATCTGTATCAACGTGAT ACCACCTATTTTGTGAATTTTAGCGCCTGGGCACATGAGATCAAAATCAGTGAACAAAATGAAGTCATCAAAGTAGAAGA CCAAGAAGCGATACGCTATCACCGCGCTTTTAATGATATCGTTGCGGCAAACGATGGAAAGATGCCGGATGACCTACAAG AACAAATCAAAGCATGGCAACCAGAAACCAAAGAACAAATGGCGCCGGTTGAGATCAATCTGGGTCATATGTGTGCTTAT TTGTTTGGCGATACGTTAGGTCAAGAAGATGAAGCGTGGTGTCAAGGTCAAGTACTTGGCAAGCAAGAAACCCTATTTAA TGGTAAAACGATTATTCTGTTTGATGTGGTGGTACTGCGCGAACAAGATGCTGATCCGTTTGTGATGCGTATTGGTGCGC TAAAAACACCTGATACTGCCTCTATTAACGTTCATGATTACGTACAAGCAAACGTATGGCTACAAGCGGCTATTTATAAA GAAAATCAGCAAGTAGCACAATCGAAAGCCAGCTAG
Upstream 100 bases:
>100_bases TGTTTGTTGCCTCTTTACTGACGGCATTGCTGACCATCATAAACCCCTCTTTTTAAGTGGCACATGGTACTCAGCGATCA CAGTTTCAGACCCAAACCTC
Downstream 100 bases:
>100_bases TCAGATTTAGATTATTTTAGACAAATAAAAAGCCCCTAATTGATTTTAGGGGCTTTTTATTTGTCTAAATACGATTAAAT TAATAATGACTCTAAGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MADLSLSIFMTINYQYKNIQSPTKITLTDEQSAGHGDHWRILTDDMSHDVPEWLQQMIEKAAMPKGLNTDVSAKDSCLLL SENQPCHINQVLAMKNGKPECFINAYPCVDSPYGLSCKIERMIVNDNSHDAVLRLRTTDGSIIYAFDQLYTANRHLYQRD TTYFVNFSAWAHEIKISEQNEVIKVEDQEAIRYHRAFNDIVAANDGKMPDDLQEQIKAWQPETKEQMAPVEINLGHMCAY LFGDTLGQEDEAWCQGQVLGKQETLFNGKTIILFDVVVLREQDADPFVMRIGALKTPDTASINVHDYVQANVWLQAAIYK ENQQVAQSKAS
Sequences:
>Translated_331_residues MADLSLSIFMTINYQYKNIQSPTKITLTDEQSAGHGDHWRILTDDMSHDVPEWLQQMIEKAAMPKGLNTDVSAKDSCLLL SENQPCHINQVLAMKNGKPECFINAYPCVDSPYGLSCKIERMIVNDNSHDAVLRLRTTDGSIIYAFDQLYTANRHLYQRD TTYFVNFSAWAHEIKISEQNEVIKVEDQEAIRYHRAFNDIVAANDGKMPDDLQEQIKAWQPETKEQMAPVEINLGHMCAY LFGDTLGQEDEAWCQGQVLGKQETLFNGKTIILFDVVVLREQDADPFVMRIGALKTPDTASINVHDYVQANVWLQAAIYK ENQQVAQSKAS >Mature_330_residues ADLSLSIFMTINYQYKNIQSPTKITLTDEQSAGHGDHWRILTDDMSHDVPEWLQQMIEKAAMPKGLNTDVSAKDSCLLLS ENQPCHINQVLAMKNGKPECFINAYPCVDSPYGLSCKIERMIVNDNSHDAVLRLRTTDGSIIYAFDQLYTANRHLYQRDT TYFVNFSAWAHEIKISEQNEVIKVEDQEAIRYHRAFNDIVAANDGKMPDDLQEQIKAWQPETKEQMAPVEINLGHMCAYL FGDTLGQEDEAWCQGQVLGKQETLFNGKTIILFDVVVLREQDADPFVMRIGALKTPDTASINVHDYVQANVWLQAAIYKE NQQVAQSKAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37598; Mature: 37467
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADLSLSIFMTINYQYKNIQSPTKITLTDEQSAGHGDHWRILTDDMSHDVPEWLQQMIEK CCCCEEEEEEEEEEEECCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHH AAMPKGLNTDVSAKDSCLLLSENQPCHINQVLAMKNGKPECFINAYPCVDSPYGLSCKIE HCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCEEEE RMIVNDNSHDAVLRLRTTDGSIIYAFDQLYTANRHLYQRDTTYFVNFSAWAHEIKISEQN EEEECCCCCCEEEEEEECCCCEEEEEEHHHHCCCEEEECCCEEEEEEECEEEEEEEECCC EVIKVEDQEAIRYHRAFNDIVAANDGKMPDDLQEQIKAWQPETKEQMAPVEINLGHMCAY CEEEECCHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCHHHCCCCEEEEHHHHHHH LFGDTLGQEDEAWCQGQVLGKQETLFNGKTIILFDVVVLREQDADPFVMRIGALKTPDTA HHHCCCCCCCCHHHCCEECCCCHHEECCCEEEEEEEEEEECCCCCCEEEEECCCCCCCCC SINVHDYVQANVWLQAAIYKENQQVAQSKAS EEEEHHEEEEEEEEEEEEECCCHHHHHHCCC >Mature Secondary Structure ADLSLSIFMTINYQYKNIQSPTKITLTDEQSAGHGDHWRILTDDMSHDVPEWLQQMIEK CCCEEEEEEEEEEEECCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHH AAMPKGLNTDVSAKDSCLLLSENQPCHINQVLAMKNGKPECFINAYPCVDSPYGLSCKIE HCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCEEEE RMIVNDNSHDAVLRLRTTDGSIIYAFDQLYTANRHLYQRDTTYFVNFSAWAHEIKISEQN EEEECCCCCCEEEEEEECCCCEEEEEEHHHHCCCEEEECCCEEEEEEECEEEEEEEECCC EVIKVEDQEAIRYHRAFNDIVAANDGKMPDDLQEQIKAWQPETKEQMAPVEINLGHMCAY CEEEECCHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCHHHCCCCEEEEHHHHHHH LFGDTLGQEDEAWCQGQVLGKQETLFNGKTIILFDVVVLREQDADPFVMRIGALKTPDTA HHHCCCCCCCCHHHCCEECCCCHHEECCCEEEEEEEEEEECCCCCCEEEEECCCCCCCCC SINVHDYVQANVWLQAAIYKENQQVAQSKAS EEEEHHEEEEEEEEEEEEECCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA