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The map label for this gene is rdxB [H]

Identifier: 93005610

GI number: 93005610

Start: 918568

End: 919977

Strand: Reverse

Name: rdxB [H]

Synonym: Pcryo_0780

Alternate gene names: 93005610

Gene position: 919977-918568 (Counterclockwise)

Preceding gene: 93005611

Following gene: 93005609

Centisome position: 30.07

GC content: 42.7

Gene sequence:

>1410_bases
ATGTCAGCACCACAATCTAATAAAATCCCTGTACAGCAAGTAGATCTTGATGCCACCAAGCATCGTGTCCATCCACGATT
TGTGACTGGTTTCTATCAAAACATTCGTGTTATTACGATGTATGCACTTTTAGCGGCGTTTTTGCTGTTGCCGTGGTTGC
GCTATAACGGACGACAAGCTATTTGGTTTGATGTGCCATCGCAGCATTATTATATTTTTGGCATGACATTTTTGACGCAG
GATTTTTATTTTATTGCCGCCTTTGCTATCATTGCAGCCTTCGCCTTATTTATGGTAACAGTCTATGCAGGGCGAGTTTG
GTGTGGCTATGCTTGTCCCCAGACCATTTGGACGCATTTATTTCAATATGTAGAAAAATGGGTGATTGGCGATCGCAATA
AGCGCATTAAGTTTGATAAAGAACCAATGAGCGCAACCAAGGTGTTTAAACGCTTCTTGATATATTTTATCTGGTTTGTG
TTTTCCATGATTACTGCCACGACCTTTGTAAGTTATGTATCGGGTACAGATGCTCTATACAATAGCTGGCAGATGATTGG
TTTTATCCCCTTCCCTGATTGGGCGACGTGGATTTGGGTATCAGTATTTATCTTTGCGTTTTCGACCTACGTCAATGCAG
GTTATATGCGCGAGCAGATGTGTATCCAAATCTGCCCTTATGGTCGTTTTCAAAGTGTGATGTTTGATAAAGATACGTTA
ATCGTTTCTTATGATTATGAGCGCGGCGAGCCTCGCGGTGCTCGCAAAAAAGGCACCAACCCTGAGAATTTAGGTGACTG
TATCGAGTGTCAGATGTGTGTACAGGTCTGCCCTACTGGGATTGATATTCGTGATGGATTACAAGTAGCTTGTATTCAAT
GCGCCGCCTGTGTGGATGCTTGTAATGAGATAATGGATAAAGTGGGCTATCCACGCGGACTTATCCGTTATACCACAGAG
CGTCAATTGGCTGAAAAAGAGAAGAGCCGTGTCTTTCGCCCTCGTTTCTTCGCTTACTTAACACTTCTCACGATACTTTG
TGGCGGTGTTTTATACGCTTTGAATGACCGTGTGCCATTAGAGATTGATATACGGCGTGACCGCAATCAGTTGTCTTCAT
TGAATCAGCAAGGCATGATTGAAAACAGTTATATCGTTAAGTTGACCAATAAAACCCAAGATGCCCATACTTATAAAATA
ACGCTCGCACCGCAAGAGGGTTTGAGCTTGGAGATTCGCTTTAACGATGTGCCGTTAGATGCTGGTGAAAGCTTTGATAT
GCCAGTTAGTATCTATGGCGACCCTGATGTGATTGAATTTGGTCAAACACCCGTGACTTTGAATGTCAGTAGTGAAGACG
GCAAATATCATGTTAGTAAGCAGAATGTTTTCACCACTCAAGGTCAGTAA

Upstream 100 bases:

>100_bases
ACTGACATTGATAACACCGCACATCCACCTATCTTATTTTTATAATAGATGTTTGTTACCCATGCCAGCAGACTGATTCT
TTTTTTAAAGAGGCACGTTT

Downstream 100 bases:

>100_bases
GTATTAATATTCATTGTTAAATGATACCTACCAGTGAGTTACCGCTTGATAGCTCACTGGTGATTGAGTTACCTTACCTT
GGCAGCTTTTGGCTGTCAGC

Product: 4Fe-4S ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 468

Protein sequence:

>469_residues
MSAPQSNKIPVQQVDLDATKHRVHPRFVTGFYQNIRVITMYALLAAFLLLPWLRYNGRQAIWFDVPSQHYYIFGMTFLTQ
DFYFIAAFAIIAAFALFMVTVYAGRVWCGYACPQTIWTHLFQYVEKWVIGDRNKRIKFDKEPMSATKVFKRFLIYFIWFV
FSMITATTFVSYVSGTDALYNSWQMIGFIPFPDWATWIWVSVFIFAFSTYVNAGYMREQMCIQICPYGRFQSVMFDKDTL
IVSYDYERGEPRGARKKGTNPENLGDCIECQMCVQVCPTGIDIRDGLQVACIQCAACVDACNEIMDKVGYPRGLIRYTTE
RQLAEKEKSRVFRPRFFAYLTLLTILCGGVLYALNDRVPLEIDIRRDRNQLSSLNQQGMIENSYIVKLTNKTQDAHTYKI
TLAPQEGLSLEIRFNDVPLDAGESFDMPVSIYGDPDVIEFGQTPVTLNVSSEDGKYHVSKQNVFTTQGQ

Sequences:

>Translated_469_residues
MSAPQSNKIPVQQVDLDATKHRVHPRFVTGFYQNIRVITMYALLAAFLLLPWLRYNGRQAIWFDVPSQHYYIFGMTFLTQ
DFYFIAAFAIIAAFALFMVTVYAGRVWCGYACPQTIWTHLFQYVEKWVIGDRNKRIKFDKEPMSATKVFKRFLIYFIWFV
FSMITATTFVSYVSGTDALYNSWQMIGFIPFPDWATWIWVSVFIFAFSTYVNAGYMREQMCIQICPYGRFQSVMFDKDTL
IVSYDYERGEPRGARKKGTNPENLGDCIECQMCVQVCPTGIDIRDGLQVACIQCAACVDACNEIMDKVGYPRGLIRYTTE
RQLAEKEKSRVFRPRFFAYLTLLTILCGGVLYALNDRVPLEIDIRRDRNQLSSLNQQGMIENSYIVKLTNKTQDAHTYKI
TLAPQEGLSLEIRFNDVPLDAGESFDMPVSIYGDPDVIEFGQTPVTLNVSSEDGKYHVSKQNVFTTQGQ
>Mature_468_residues
SAPQSNKIPVQQVDLDATKHRVHPRFVTGFYQNIRVITMYALLAAFLLLPWLRYNGRQAIWFDVPSQHYYIFGMTFLTQD
FYFIAAFAIIAAFALFMVTVYAGRVWCGYACPQTIWTHLFQYVEKWVIGDRNKRIKFDKEPMSATKVFKRFLIYFIWFVF
SMITATTFVSYVSGTDALYNSWQMIGFIPFPDWATWIWVSVFIFAFSTYVNAGYMREQMCIQICPYGRFQSVMFDKDTLI
VSYDYERGEPRGARKKGTNPENLGDCIECQMCVQVCPTGIDIRDGLQVACIQCAACVDACNEIMDKVGYPRGLIRYTTER
QLAEKEKSRVFRPRFFAYLTLLTILCGGVLYALNDRVPLEIDIRRDRNQLSSLNQQGMIENSYIVKLTNKTQDAHTYKIT
LAPQEGLSLEIRFNDVPLDAGESFDMPVSIYGDPDVIEFGQTPVTLNVSSEDGKYHVSKQNVFTTQGQ

Specific function: Involved in a membrane generated redox signal; required to maintain repression of photosynthesis gene expression in the presence of oxygen [H]

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014116
- InterPro:   IPR013783 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54025; Mature: 53894

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPQSNKIPVQQVDLDATKHRVHPRFVTGFYQNIRVITMYALLAAFLLLPWLRYNGRQA
CCCCCCCCCCCEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
IWFDVPSQHYYIFGMTFLTQDFYFIAAFAIIAAFALFMVTVYAGRVWCGYACPQTIWTHL
EEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHH
FQYVEKWVIGDRNKRIKFDKEPMSATKVFKRFLIYFIWFVFSMITATTFVSYVSGTDALY
HHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
NSWQMIGFIPFPDWATWIWVSVFIFAFSTYVNAGYMREQMCIQICPYGRFQSVMFDKDTL
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEECCCCCHHHEEECCCEE
IVSYDYERGEPRGARKKGTNPENLGDCIECQMCVQVCPTGIDIRDGLQVACIQCAACVDA
EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
CNEIMDKVGYPRGLIRYTTERQLAEKEKSRVFRPRFFAYLTLLTILCGGVLYALNDRVPL
HHHHHHHCCCCCCCEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCE
EIDIRRDRNQLSSLNQQGMIENSYIVKLTNKTQDAHTYKITLAPQEGLSLEIRFNDVPLD
EEEECCCHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCCCC
AGESFDMPVSIYGDPDVIEFGQTPVTLNVSSEDGKYHVSKQNVFTTQGQ
CCCCCCCCEEECCCCCEEECCCCCEEEEECCCCCCEEEECCCEEECCCC
>Mature Secondary Structure 
SAPQSNKIPVQQVDLDATKHRVHPRFVTGFYQNIRVITMYALLAAFLLLPWLRYNGRQA
CCCCCCCCCCEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
IWFDVPSQHYYIFGMTFLTQDFYFIAAFAIIAAFALFMVTVYAGRVWCGYACPQTIWTHL
EEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHH
FQYVEKWVIGDRNKRIKFDKEPMSATKVFKRFLIYFIWFVFSMITATTFVSYVSGTDALY
HHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
NSWQMIGFIPFPDWATWIWVSVFIFAFSTYVNAGYMREQMCIQICPYGRFQSVMFDKDTL
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEECCCCCHHHEEECCCEE
IVSYDYERGEPRGARKKGTNPENLGDCIECQMCVQVCPTGIDIRDGLQVACIQCAACVDA
EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
CNEIMDKVGYPRGLIRYTTERQLAEKEKSRVFRPRFFAYLTLLTILCGGVLYALNDRVPL
HHHHHHHCCCCCCCEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCE
EIDIRRDRNQLSSLNQQGMIENSYIVKLTNKTQDAHTYKITLAPQEGLSLEIRFNDVPLD
EEEECCCHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCCCC
AGESFDMPVSIYGDPDVIEFGQTPVTLNVSSEDGKYHVSKQNVFTTQGQ
CCCCCCCCEEECCCCCEEECCCCCEEEEECCCCCCEEEECCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9068641; 7592416 [H]