| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93005598
Identifier: 93005598
GI number: 93005598
Start: 904474
End: 905226
Strand: Reverse
Name: 93005598
Synonym: Pcryo_0768
Alternate gene names: NA
Gene position: 905226-904474 (Counterclockwise)
Preceding gene: 93005599
Following gene: 93005597
Centisome position: 29.58
GC content: 43.96
Gene sequence:
>753_bases ATGGCTGCAACGTTTAGCTTAATTGGTACTATTGAACCTTTTTTACATTGTAATCTTAAAAAAGGTGACTCAATCTATTG CGAAGCCAACGCCATGGTGATGATGGAATCAAACCTTGAGCTGAAAGGTAAATTGCAAGGTGGATTGATGCAGTCATTGA TGCGCCGTTTTGCTAACGATGAGTCACTTTTTCAGCAGCAAATTGAAGCGGTAAACGGTGAAGGTGATTGTTTGCTGGCA CCAACGCTCGATGGCGATATGCAAATCATTGATTGCGGCAAACATCAATACACCTTGAGCGATGGTGCTTTTGTCGCGGC GCAAATCGGTGTCGATATCAGAGCCAATATTCAACGTAATCTAGGTGGCGCAATCTTTGGTGATACTGGCGGATTTATGG TCATGCAGACACAAGGTCAAGGTCAGGTAGTGGTATCGGGTTTCGGTTCATTATTTGAGATTGATGTGACGCCAGATAAA GACGTCATCATCGATAATGGTCATGTGGTCTGCTGGGATTCAACGCTTGATTATAAGCTCTCTGTATCGACCAGTAAGAA AAAAGGCATCATGAGCAATATTATCAATTCAGTCACCAGTGGCGAAGGAATGGTACTCAACTTTTCAGGCTCAGGCAAAG TTATTATCTGCTCACGCAATCGTGACAGCTATCAAGGGTGGCTACAAAGCATCTTGGGCACCAGTTCAGGTGGTCGTGGC GGCAATAGCGGATTACTTGGCAATATTTTATAG
Upstream 100 bases:
>100_bases GTGGCTATGAATTTAATGTCTAAACGATATTAACAGAAGTTATTTGCTATACCCTCTACAGATGGACTTATAAAAATATT AGAATAAGGACTTTTGACCT
Downstream 100 bases:
>100_bases CAATTTCTCATACAACTATTATAAGGATTATCACATGGCAGTTAGTTTACAAAAGGGTCAAAAAATCTCCCTAAGCAAAG AAGCGGGTGGCGAGCTTACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MAATFSLIGTIEPFLHCNLKKGDSIYCEANAMVMMESNLELKGKLQGGLMQSLMRRFANDESLFQQQIEAVNGEGDCLLA PTLDGDMQIIDCGKHQYTLSDGAFVAAQIGVDIRANIQRNLGGAIFGDTGGFMVMQTQGQGQVVVSGFGSLFEIDVTPDK DVIIDNGHVVCWDSTLDYKLSVSTSKKKGIMSNIINSVTSGEGMVLNFSGSGKVIICSRNRDSYQGWLQSILGTSSGGRG GNSGLLGNIL
Sequences:
>Translated_250_residues MAATFSLIGTIEPFLHCNLKKGDSIYCEANAMVMMESNLELKGKLQGGLMQSLMRRFANDESLFQQQIEAVNGEGDCLLA PTLDGDMQIIDCGKHQYTLSDGAFVAAQIGVDIRANIQRNLGGAIFGDTGGFMVMQTQGQGQVVVSGFGSLFEIDVTPDK DVIIDNGHVVCWDSTLDYKLSVSTSKKKGIMSNIINSVTSGEGMVLNFSGSGKVIICSRNRDSYQGWLQSILGTSSGGRG GNSGLLGNIL >Mature_249_residues AATFSLIGTIEPFLHCNLKKGDSIYCEANAMVMMESNLELKGKLQGGLMQSLMRRFANDESLFQQQIEAVNGEGDCLLAP TLDGDMQIIDCGKHQYTLSDGAFVAAQIGVDIRANIQRNLGGAIFGDTGGFMVMQTQGQGQVVVSGFGSLFEIDVTPDKD VIIDNGHVVCWDSTLDYKLSVSTSKKKGIMSNIINSVTSGEGMVLNFSGSGKVIICSRNRDSYQGWLQSILGTSSGGRGG NSGLLGNIL
Specific function: Unknown
COG id: COG2013
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002838 - InterPro: IPR016031 [H]
Pfam domain/function: PF01987 DUF124 [H]
EC number: NA
Molecular weight: Translated: 26666; Mature: 26535
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATFSLIGTIEPFLHCNLKKGDSIYCEANAMVMMESNLELKGKLQGGLMQSLMRRFAND CCCEEEHHHCCCHHEEEECCCCCEEEEECCEEEEEECCCEEEEEECHHHHHHHHHHHCCC ESLFQQQIEAVNGEGDCLLAPTLDGDMQIIDCGKHQYTLSDGAFVAAQIGVDIRANIQRN HHHHHHHHHHCCCCCCEEEEECCCCCEEEEECCCEEEEECCCCEEEEEECCEEEEEEECC LGGAIFGDTGGFMVMQTQGQGQVVVSGFGSLFEIDVTPDKDVIIDNGHVVCWDSTLDYKL CCCEEEECCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCEEEECCEEEEECCCCCEEE SVSTSKKKGIMSNIINSVTSGEGMVLNFSGSGKVIICSRNRDSYQGWLQSILGTSSGGRG EECCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCCCCCC GNSGLLGNIL CCCCCCCCCC >Mature Secondary Structure AATFSLIGTIEPFLHCNLKKGDSIYCEANAMVMMESNLELKGKLQGGLMQSLMRRFAND CCEEEHHHCCCHHEEEECCCCCEEEEECCEEEEEECCCEEEEEECHHHHHHHHHHHCCC ESLFQQQIEAVNGEGDCLLAPTLDGDMQIIDCGKHQYTLSDGAFVAAQIGVDIRANIQRN HHHHHHHHHHCCCCCCEEEEECCCCCEEEEECCCEEEEECCCCEEEEEECCEEEEEEECC LGGAIFGDTGGFMVMQTQGQGQVVVSGFGSLFEIDVTPDKDVIIDNGHVVCWDSTLDYKL CCCEEEECCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCEEEECCEEEEECCCCCEEE SVSTSKKKGIMSNIINSVTSGEGMVLNFSGSGKVIICSRNRDSYQGWLQSILGTSSGGRG EECCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCCCCCC GNSGLLGNIL CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA