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The map label for this gene is 93005395

Identifier: 93005395

GI number: 93005395

Start: 671336

End: 671995

Strand: Reverse

Name: 93005395

Synonym: Pcryo_0565

Alternate gene names: NA

Gene position: 671995-671336 (Counterclockwise)

Preceding gene: 93005396

Following gene: 93005394

Centisome position: 21.96

GC content: 46.36

Gene sequence:

>660_bases
ATGCCTAAAAAGTCGAATAGACAGAAACTAGCGACCGCATTACTTGCATCTTTGCCAATGCTTGCCATCGTTGGGGCGAC
TGCCAGTCTTAGTGGCTGCGGCTTTCAACTACGCGGTTATGATGCGCCCATGCTGTTTGATGTGGCGAAGACTGCGGTAA
TTATCGAAGATAATCGCACGGCATTCCCACTGAAGCTGCCGCTCACAAAGCGCCTTGAGGCCTTGGGTGTTGATGTCATT
ACTAACATGACATTGACGGATGTCGCTAGTAACAATCAAAACGTAGGCACTGAAACCATCGCTGCGATTACTGTCAATAA
CGTACGTTTTAAGCGTTATGAATTGGTTGGCGTATTAACAGAAATTCGCTTAGTGATATCAGCCGATGTTAGCTATCAAA
GCATAGATAATGGTAAGCCTGTAACGCTCAGTAATCCGATTCAAGTTGAACGTAGCTATCAGTATAACGAGGCGTCAGTG
AGCACCGACGATCAGCAAGGTGATCAAATTCGTGAATGGCTTTATGACAGTTTAGCAAGACGTATCACCGATCAATATGT
CGCGATTGCATTGCCAAAGGTGACACCTGCCAGCGCCACTACTTCTGCGCAAATCGGTAAAGGTACAGGCACTACGGCGA
TTCTTGTACCCAAACCTTAA

Upstream 100 bases:

>100_bases
CGGATGTTTTAGGTTTTCTTATCTTAATAAGAATAGCAATTATGACGGGTAAGCACCATGCTATGCCGTCATATCAAACA
ACATGTAAGGGAAAAAGCCC

Downstream 100 bases:

>100_bases
TATGGCTCAAATGTAGCTTAGCAATTTTTTGGCTTTGCTTTTTTATTCACAACTTTGTGTGCGTCAGCCTTTTATGCAAG
ATACTTTTATACAAGCTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MPKKSNRQKLATALLASLPMLAIVGATASLSGCGFQLRGYDAPMLFDVAKTAVIIEDNRTAFPLKLPLTKRLEALGVDVI
TNMTLTDVASNNQNVGTETIAAITVNNVRFKRYELVGVLTEIRLVISADVSYQSIDNGKPVTLSNPIQVERSYQYNEASV
STDDQQGDQIREWLYDSLARRITDQYVAIALPKVTPASATTSAQIGKGTGTTAILVPKP

Sequences:

>Translated_219_residues
MPKKSNRQKLATALLASLPMLAIVGATASLSGCGFQLRGYDAPMLFDVAKTAVIIEDNRTAFPLKLPLTKRLEALGVDVI
TNMTLTDVASNNQNVGTETIAAITVNNVRFKRYELVGVLTEIRLVISADVSYQSIDNGKPVTLSNPIQVERSYQYNEASV
STDDQQGDQIREWLYDSLARRITDQYVAIALPKVTPASATTSAQIGKGTGTTAILVPKP
>Mature_218_residues
PKKSNRQKLATALLASLPMLAIVGATASLSGCGFQLRGYDAPMLFDVAKTAVIIEDNRTAFPLKLPLTKRLEALGVDVIT
NMTLTDVASNNQNVGTETIAAITVNNVRFKRYELVGVLTEIRLVISADVSYQSIDNGKPVTLSNPIQVERSYQYNEASVS
TDDQQGDQIREWLYDSLARRITDQYVAIALPKVTPASATTSAQIGKGTGTTAILVPKP

Specific function: Unknown

COG id: COG2980

COG function: function code M; Rare lipoprotein B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23657; Mature: 23526

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKKSNRQKLATALLASLPMLAIVGATASLSGCGFQLRGYDAPMLFDVAKTAVIIEDNRT
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHEEECCEEEEEECCCE
AFPLKLPLTKRLEALGVDVITNMTLTDVASNNQNVGTETIAAITVNNVRFKRYELVGVLT
EEEEECCHHHHHHHHCHHHHCCCEEEEECCCCCCCCCEEEEEEEECCEEEEHHHHHHHHH
EIRLVISADVSYQSIDNGKPVTLSNPIQVERSYQYNEASVSTDDQQGDQIREWLYDSLAR
HHEEEEECCCCEEECCCCCCEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
RITDQYVAIALPKVTPASATTSAQIGKGTGTTAILVPKP
HHHHCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure 
PKKSNRQKLATALLASLPMLAIVGATASLSGCGFQLRGYDAPMLFDVAKTAVIIEDNRT
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHEEECCEEEEEECCCE
AFPLKLPLTKRLEALGVDVITNMTLTDVASNNQNVGTETIAAITVNNVRFKRYELVGVLT
EEEEECCHHHHHHHHCHHHHCCCEEEEECCCCCCCCCEEEEEEEECCEEEEHHHHHHHHH
EIRLVISADVSYQSIDNGKPVTLSNPIQVERSYQYNEASVSTDDQQGDQIREWLYDSLAR
HHEEEEECCCCEEECCCCCCEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
RITDQYVAIALPKVTPASATTSAQIGKGTGTTAILVPKP
HHHHCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA