| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93004996
Identifier: 93004996
GI number: 93004996
Start: 193488
End: 194111
Strand: Reverse
Name: 93004996
Synonym: Pcryo_0165
Alternate gene names: NA
Gene position: 194111-193488 (Counterclockwise)
Preceding gene: 93004997
Following gene: 93004995
Centisome position: 6.34
GC content: 40.54
Gene sequence:
>624_bases ATGAAAACGTTAAAACCTTTCTCGTTTAAAACTGTCCTTTCTGCCTCACTTGCATTTTCACTCGTCGGCGTTACTGCTGG CTGCGCTGTCGCCGGTTCAGGTTATGACAATTATCCGATATACAATGACAACAGCGGTTATAACCACGCTGAAAACAACC GTGCCATTCAGCAGCTGCGTCAGGATTTACGCCGTAAAGGTTATAACGTGATGGACGTCAGAACAGAGAGCTACCGCGGT AACCGTGTGCTGACGGTTCTTGCTAAGAAAAATAATCAAGCGTATGAACTAAAATACAGCTCACCAGATCTTAGGCTGAT CAGCTCGACCAAAAAACCTTGGTCTAATGTCTGGGATGATAAAAACGACTATAAAGATAATGGCAAATATAAAGATAAAC ATTATAAAAATGAAGATAGCATCAAAAACGAATCACGTTATCCAGCGATTAAACGCCGTGCTATCAATAAAGTTGAGGGT ATGGGTTATCGAGTCAAAGATATCGAGTTTGAACAAAAGAACAATCGTGGCGTGTTTGAGATTGAAGCCAAACGCGGCTC ACAAGAGTATGAGATTACACTTGGCTATCCAAACTTGAATGTAATCAAGATTAAAAAAGATTAA
Upstream 100 bases:
>100_bases ATTCATGATTGTTAGCGTTATTCTGCATTATATATTGACAAAATTTTGCAACTGTATATAAGCACTTTTTAAGTCAACTT ATATCTTAGGAGATTCCATC
Downstream 100 bases:
>100_bases TGTTAAAGCCATAGCATCCAAATAACATTTATTCGTTCTATTATTTATCAAATTTTGGCATCATTTAGTATTTGATGTCC GCGGTCAAATAAGCCAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MKTLKPFSFKTVLSASLAFSLVGVTAGCAVAGSGYDNYPIYNDNSGYNHAENNRAIQQLRQDLRRKGYNVMDVRTESYRG NRVLTVLAKKNNQAYELKYSSPDLRLISSTKKPWSNVWDDKNDYKDNGKYKDKHYKNEDSIKNESRYPAIKRRAINKVEG MGYRVKDIEFEQKNNRGVFEIEAKRGSQEYEITLGYPNLNVIKIKKD
Sequences:
>Translated_207_residues MKTLKPFSFKTVLSASLAFSLVGVTAGCAVAGSGYDNYPIYNDNSGYNHAENNRAIQQLRQDLRRKGYNVMDVRTESYRG NRVLTVLAKKNNQAYELKYSSPDLRLISSTKKPWSNVWDDKNDYKDNGKYKDKHYKNEDSIKNESRYPAIKRRAINKVEG MGYRVKDIEFEQKNNRGVFEIEAKRGSQEYEITLGYPNLNVIKIKKD >Mature_207_residues MKTLKPFSFKTVLSASLAFSLVGVTAGCAVAGSGYDNYPIYNDNSGYNHAENNRAIQQLRQDLRRKGYNVMDVRTESYRG NRVLTVLAKKNNQAYELKYSSPDLRLISSTKKPWSNVWDDKNDYKDNGKYKDKHYKNEDSIKNESRYPAIKRRAINKVEG MGYRVKDIEFEQKNNRGVFEIEAKRGSQEYEITLGYPNLNVIKIKKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23900; Mature: 23900
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLKPFSFKTVLSASLAFSLVGVTAGCAVAGSGYDNYPIYNDNSGYNHAENNRAIQQLR CCCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCEECCCCCCCCCCCHHHHHHHH QDLRRKGYNVMDVRTESYRGNRVLTVLAKKNNQAYELKYSSPDLRLISSTKKPWSNVWDD HHHHHCCCEEEEEEECCCCCCEEEEEEEECCCCEEEEEECCCCEEEEECCCCCCHHCCCC KNDYKDNGKYKDKHYKNEDSIKNESRYPAIKRRAINKVEGMGYRVKDIEFEQKNNRGVFE CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEE IEAKRGSQEYEITLGYPNLNVIKIKKD EEECCCCCEEEEEEECCCCEEEEEECC >Mature Secondary Structure MKTLKPFSFKTVLSASLAFSLVGVTAGCAVAGSGYDNYPIYNDNSGYNHAENNRAIQQLR CCCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCEECCCCCCCCCCCHHHHHHHH QDLRRKGYNVMDVRTESYRGNRVLTVLAKKNNQAYELKYSSPDLRLISSTKKPWSNVWDD HHHHHCCCEEEEEEECCCCCCEEEEEEEECCCCEEEEEECCCCEEEEECCCCCCHHCCCC KNDYKDNGKYKDKHYKNEDSIKNESRYPAIKRRAINKVEGMGYRVKDIEFEQKNNRGVFE CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEE IEAKRGSQEYEITLGYPNLNVIKIKKD EEECCCCCEEEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA