Definition Nitrobacter hamburgensis X14, complete genome.
Accession NC_007964
Length 4,406,967

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 92116800

GI number:

Start: 1397792

End: 1400488

Strand: Direct

Name: Not Available

Synonym: Nham_1241

Alternate gene names: NA

Gene position: NA

Preceding gene: 92116798

Following gene: 92116801

Centisome position: NA

GC content: NA

Gene sequence:

>2697_bases
ATGACTGGCAAGGATTGGCAGGCGGGCGGCAAGGGCGGCAAGAGCGTCGCTGCTGCGGTGGGGCTCGTATACGCCGCTGT
CGCTGCGGCGCCCGCGAGCGCGTGGGCTGCGGCCATCGGATTGTCGACGGACAATCATATTACCGGGACCGATGCCGGCG
TGGCTTGGGAAATTTTCACCGGCGGCTTTATTGCCGTTTCCTTTTTGGCGGCGGCCGCCATCTGGGTGACGTCCGTGCTG
CGCAAGGCCAGGCGCTCTCTGCGCAGACACGCATTCGTCAGCTCTGGGCTGAACAATCTCAACCAGGGCGTGGTGATGAC
GGATTCGCGTCAGCGGATCATTTTCTGCAACGACCGCTATCTCGAAATCTATGGATTGCTTCGATCGGATATCCGCCCGG
CTATGACGGACCCCGAACTTGGCGATCTGCGGCGCGCGCGCGGTGTGCTCGACGCCTGCAGTGACCAGTTCTATCGATTG
TCGAATGCCTGCGATGGCCTCTTCACCGAACTGCCCGACGGGCGTTTGATCGCAGTGAAGCGGTTCAAGCTGCCGAACGG
CGGCTCGGTTGCGACGCACGAGGATTGCAGCGAGCAGCGCAAGCTCGCCAGGCAACTGGCGACCACCAAGCAGTTTCTGG
AATCGGTCATCGACAACGTGCCGGTGTGTATCGCCGCCAAGGGTATCGAAGACGGCCGCTACATTCTGGTCAACCGCGCC
TTCGAGCGTTTCTCCCGCGTCTCGCGCGATTTCATCGTCGGCAGGCGCGCCGATGAAATCTTCCAACCCCAGACGGCCGC
CAATATCGCCGCGACCGACCAGGTCGCGCTGGCCTCGCCCGACAGTCATTACTACAGCGAAATGGTATTTGAGCGGGGCT
CGGAGAAGCGCACGCTCGCCAATAACAAGGTGGTCGCCCGCAACGAGGCCGGTCAGCCGGTGTTTCTGATCGCCCTGTTC
GAGGATGTGACCGAGCGCAAGTCGCTGTCGCGCGAGCTGGAGAACGCCAAGAAGTTCCTCGAAACCGTCGTCGACAACAT
TCCGGTGTCGCTGATCGTTCAGTGCGCCAGCGACGGCCATTACCTGCTCGCCAACCGCCGGGCCGAGACGATTCTCAATC
GCCGCCGCGAGGATGCAATCGGGCTGACCGCATCCGATATCTTCGGTCCGCGCGATGCGAAGCTGATCGTTGCCCGCGAC
GAAATGGCGGTCGGGAATGGCGGTCTTTTGACCGAAGAGCACCCGATCCGCACCAGCGAAGGGCTGCGGTTGTTCCTGAC
CCGCCGCGTTACGGTGCGCGGCGATGACGGCGAACCGCAGTATCTGATCAAGACGAACGAGGATGTGACCGATCGTCGCC
AGACCGAGTCGCGCATGGCGCACATGGCCTATCACGACGGGCTGACCGATCTGCCGAACCGCACCGCGTTCCTGAAAGCG
CTGTCGCAGATGATCGAGGCGTGTCAGGGCACGGACGATGAGTTCGCGGTGCTGTCGCTCGATCTTGACGGCCTCAAGGA
GATCAACGACGTATTCGGCCACGCGGTCGGCGACAGCCTGCTGATCGAGGTGGCGCGCCGCATTCAGAGCGCGGCGCATG
GCGGCCTCGTTGCCCGGCTCAGCGGCGACGAGTTCGGTGTGATCATTGATGGCAAGCAGCCCGCCGTTGGCCAGGCGCTC
GCCCAACAGATCGTCGCGGCAATGGTTCCGGAATTTCTGATTGATGATAAATCCGTCCGGACGGGCCTTACCACCGGCAT
TTCGCTGTTCCCGCGCGACGGGACCGATCCCGCATCGCTGCTCGCCAATGCCGGCGTCGCATTGTTCCGCGCCAAGGCGA
AATCGCGCGGCTCCATCTGCGTGTTCGAACCGGAAATGGATCGGCAGATCCGGGATCGCCGCGTGCTGCACCGGGATCTG
TCGAACGCCATGCGGAACGGCGAACTGTCGCTGCACTATCAGCCGCAGGCACGCACGGGCCGCAAGCTCGTTGATGACGA
TGTGATCGGCTTCGAGGCGCTGACGCGATGGAGTCATCCGACCCGCGGCTTCGTTCCGCCCGGCGATTTCATTCCGCTCG
CGGAGGAGAGCGGCCTGATCGTGGCAATGGGCGAGTGGATTCTGCGCGAGGCGTGCCGAGAGGCGGCGTCCTGGCCGAGC
CCGAAGCAGATCGCGGTCAACCTGTCGCCGGTGCAGTTCATTCACGGCGACCTGGTCGGCCTCGTGCACTCTATTCTGCT
GGAAACCGGACTCAATCCAAGCCGGCTGGAACTGGAAATCACCGAAGGCGTGCTGATCGAGGACTTTGAGCGCAGCCTGG
CGCTGCTGCGGCGGCTGAAAGCGCTGGGCGTTCGCATCGCGATGGACGATTTCGGCAGCGGCTATTCGTCGCTGAGCTAC
TTCCAGGCGTTCCCGTTCGACAAGATCAAGATCGACCGTGGGTTCGTCATGTATCTCGGACGCAATCCGCAGTCCGCGGC
GATCGTCCGGGCGGTGATCGGCCTCGGCCACGGCCTCGACGTATCGATCGTCGCGGAAGGCGTCGAGACGCAGGAGCAAC
TCGGCTTCCTCGCCGACGAGGGCTGCGACGCGGTCCAGGGCTTTTTCATCGGCAAACCGGAGCCGATCGCGCATTACGCC
ACCCTGGTCGGGCGTCCGCCCCGCATTCCCGAAGCGATCCGCCGCAAGGCCGGCTGA

Upstream 100 bases:

>100_bases
ATTGTGCAATCCAGGTCGCATTTTCCCATCGCGGGGGTAAGCATTTACCTGATTCAAACCCGTGAGGCCAGACACTCTGC
CGGCAAATCTCGGGTGCGCG

Downstream 100 bases:

>100_bases
GACCGCATTCACCGCTAGAATAGAGCGTTTTCGAGCGAAGTGGATACCGGTTCGCGTGAAGAAAACGCGTCAAATCAAAA
TCATAGAGCCCGCTTCTGAC

Product: diguanylate cyclase/phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>898_residues
MTGKDWQAGGKGGKSVAAAVGLVYAAVAAAPASAWAAAIGLSTDNHITGTDAGVAWEIFTGGFIAVSFLAAAAIWVTSVL
RKARRSLRRHAFVSSGLNNLNQGVVMTDSRQRIIFCNDRYLEIYGLLRSDIRPAMTDPELGDLRRARGVLDACSDQFYRL
SNACDGLFTELPDGRLIAVKRFKLPNGGSVATHEDCSEQRKLARQLATTKQFLESVIDNVPVCIAAKGIEDGRYILVNRA
FERFSRVSRDFIVGRRADEIFQPQTAANIAATDQVALASPDSHYYSEMVFERGSEKRTLANNKVVARNEAGQPVFLIALF
EDVTERKSLSRELENAKKFLETVVDNIPVSLIVQCASDGHYLLANRRAETILNRRREDAIGLTASDIFGPRDAKLIVARD
EMAVGNGGLLTEEHPIRTSEGLRLFLTRRVTVRGDDGEPQYLIKTNEDVTDRRQTESRMAHMAYHDGLTDLPNRTAFLKA
LSQMIEACQGTDDEFAVLSLDLDGLKEINDVFGHAVGDSLLIEVARRIQSAAHGGLVARLSGDEFGVIIDGKQPAVGQAL
AQQIVAAMVPEFLIDDKSVRTGLTTGISLFPRDGTDPASLLANAGVALFRAKAKSRGSICVFEPEMDRQIRDRRVLHRDL
SNAMRNGELSLHYQPQARTGRKLVDDDVIGFEALTRWSHPTRGFVPPGDFIPLAEESGLIVAMGEWILREACREAASWPS
PKQIAVNLSPVQFIHGDLVGLVHSILLETGLNPSRLELEITEGVLIEDFERSLALLRRLKALGVRIAMDDFGSGYSSLSY
FQAFPFDKIKIDRGFVMYLGRNPQSAAIVRAVIGLGHGLDVSIVAEGVETQEQLGFLADEGCDAVQGFFIGKPEPIAHYA
TLVGRPPRIPEAIRRKAG

Sequences:
NA

Specific function: NA

COG id: COG5001

COG function: function code T; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA