Definition Nitrobacter hamburgensis X14, complete genome.
Accession NC_007964
Length 4,406,967

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Identifier: 92115690

GI number:

Start: 67557

End: 71045

Strand: Direct

Name: Not Available

Synonym: Nham_0058

Alternate gene names: NA

Gene position: NA

Preceding gene: 92115689

Following gene: 92115691

Centisome position: NA

GC content: NA

Gene sequence:

>3489_bases
GTGAAAGCGCCTCGCCCCGTTCATCCCGACGCCAGCGCGCGTCAGCAGCGCGCGTCCGACCCGGCGACGTCGGTTTTCGT
CTCGGCCAATGCCGGATCGGGCAAGACCCATGTGCTGGTGCAACGCGTGATCCGCCTGCTGCTCAATGGCGTTGATCCGG
CGCGCATCCTCTGCATCACCTTCACCAAGGCCGCCGCCGCCAACATGTCGGAGCGGGTGTTCTCGACGCTGGGACACTGG
GTCACGCTCGACGATGAAGCCCTGAACGCGGCGCTGCGCGACACCGGTATCGCGCAGCCCGATGCCTGGTCGCGCCAGCG
CGCGCGCAAACTGTTCGCGGCAGCACTGGAAACGCCGGGCGGGCTGAAGGTGCAGACCATCCACGCACTCTGCACGCGGC
TGTTGCAGCAGTTTCCGTTCGAGGCGCGGGTGCCGGCGCGTTTCAGCGTGCTCGACGAGCGCGACCAGACCGGGATGATG
GAGCGCGCGAGCATCAGTGTCATGCTCGATGCATCGCAGAATCCCGACAGCCCCGCCGGCCGCGCGCTGCAATACGCCAT
GGGCGCGGCCGCCGACACGACGCTGCGTGACGTGGTCAACCAGGCCTGTCTCAGCCGCGATCACTTCATGGCCTGGACCG
AGGATCGCGGCATCGAGCAGGCGATCAGCGATGTGGCCGACGCGCTCGACGTCGATCCCGCCGAGCGCGTCGAGGATGTC
GAACGCGAGATCGTCGACGGGCCGAACCTGCCAATATCTGAATGGGAAGCGCTCGCCGCGATTCTGGAAACAGGCAACAA
ATCCGACATCGAGCAGGCCAGACGCTTGCGCGAGGCGCACGCCATGATCGGCGAGGCGGCGCAAGCCGATCGCTATCTCG
ATGTCTTCCTGACCGGCGATTCCGTCTTGCGCAAATCCTTCGTCACCAAGAAGATCAGCGATGTCAGACCCGACATCGCC
GCGATGCTCGACCGGGAGAGCCAGCGTGTGATCGCGCTGCTCGAACGCCGCCGCGCGCTGACCATCCGCGACCGCACGCA
ATCCCTTCTCGTCATCGCAACCGCGGTCGCCGCCAACTACCGGCGCGAGAAGCAGGAGCGCGGCCTGCTCGATTACGACG
ACCTGATCGATAAGACGCTGGCGATGCTGGACCAGACCTCGCCCGGTTGGGTGCATTACAAGCTCGACCGCGGCGTCGAC
CATGTGCTGATCGACGAGGCGCAGGATACCAGCCCGAAGCAATGGGACATCGTCGAGCGCATCATCGCGGACTTCACCAC
CGGGGAAGGGGCGCGCGAGGGCGTCAGGCGGACGGTGTTCGCGGTCGGCGACGAGAAGCAGTCGATCTTCTCGTTCCAGG
GCGCGGCCCCGCGCGAGTTCGACGAACGGCGAAGCAAGCTGGAGCGGAAATTCAGGGACGCCGAACTTCCGTTTCGCAAG
GAGGATTTCATCTACTCGTTCCGCTCGGGGAAGACGATCCTGGAGTCCGTCGATTACGTGTTCCGCGATGCCGCGATCTA
TACCAGCATCCATGCGGTCGGCGCCCATCCGGTGCATGAATCGCTGGCGGACGCAGCACCGGGCGTGGTCGATCTCTGGA
GTCTGGAAGAGCGAGATGCGCGACAGCAGATCGAGGGCTGGCGCGCGCCGTTCGATGCGGTCTCCGCAACCAGCTCCGAG
GTCAAGCTCGCCCGCCGCATCCGCAACGAGGTCAAGACGCTGATCGCGCAGGGCACCATGACGGGGCATCTGGGTGACCG
CCGCCCGCTCCGCTATGGCGACATTCTGGTGCTGGTGCGGCGGCGCGGCAACGCGTTCGACGCCATCATCCAGGCGCTGA
AGCAATCCGGCATTCCCGTCGCCGGCGCCGACCGCCTCAAGCTGACCGAGCACATCGCGATCATCGATCTGATGAACCTC
GCCGACGCGCTGCTGTTGCCGCGGGACGATCTGGCGCTGGCGGTGGCGCTGAAGAGTCCGCTGTTCGGCCTTGACGACGA
CGACCTGTTTGCCATCGCACACAATCGCAAGGGCTCGCTGCGCGACGCACTCGCGGATCACGCGACGGCCAACGACAAAT
TCCGCGACGCATTCGAGCGCCTGAAGATGTGCGAAACCCGCGCCGCACACGAATCGCCGTTCGCGTTCTATGCGTGGCTG
CTGGGCGGAGATGGCGGGCGGCGGCGAATCCTGCGCCGGCTCGGCCACGAGGCCAACGACGCGCTCGACGAATTCCTCGA
ACTGGCGCTGACTTACGAGCGCAAGGCGCCGGCATCCCAGCAGGGGTTCATGGCGTGGCTGCGCGCCGCCGACACGGACG
TGAAGCGCGACATGGAGATTTCGCGCGACGAGGTGCGGGTGATGACGGTGCACGGCGCCAAGGGGCTCGAGGCCTCCGTG
GTGTTTCTCGCCGATACCGTGACGTCGCCGGCCGATACCGAGCGCCTCAACCTGATCCGTATGTCGCGCGGCAACGCGCC
CGCCCATGCAGCAGGCGTCACGGTCTGGGCCGGCAGAAAGGCTGAAGATCCGCCTGACGTGGTGAACGCCCGCGCGGCCA
TGATCGCCGAGACCGAACACGAATATCGCCGCCTGCTTTACGTGGCGATGACGCGGGCGGCGGACCGCCTGATCGTCGGC
GGCTGCAAACCCGGCAACCGCAAGGACGTGCGCGAGCACGCATGGTACGACCTGATCGACAAGGGCCTTGGCAAATCCGG
CCTCGCGATGCGGGAGATCGAGACCGCCGCCGGCACGGTCAAGCGTTTCACGCGGCCGGGGGAAACCGAACCGGATGCCG
CCGGTCCCGCAACGCCGGTTGCCGCCGCACCGATCGCGCTGCCGCCGTGGCTGCACAGCATGGCCGCGCCGGAAGCGCCC
GCCGGGCCATCGCTGCGGCCATCGGATGCAGATGACAACGCGCATCACCGCATCTGGCCCGGCGAGTCCCCGGACCAGCG
CCGCCGCGCGCTGTTGCGCGGCACGCTGGTGCACCGCCTGCTGCAATCGCTGCCTGATGTGCCGGTCGATCGCCGCGGGG
ACACCGCGCTGGCCTATCTCGGGCGCAATGCGCGCGACTGGAGCGAGGCCGAGCGCGACGCACTGGCGGCGCAGGTGCTG
GCGTTGATCGGCGACTCCCAATTCGCGCCGGTGTTCACGGACGGCAGCCGGGCCGAGGTGGCGATTGCAGGACGGCTGAC
GACGCGACGGGGCGATCCCGTGCTGGTGTCCGGCCAGATCGACCGGCTCGTGGTAACGCGGGAAGCGGTTCTGATCGTGG
ATTTCAAGACCAACCATGCCCCGCCCCGAAACCCCGCCGACGCACCGCCGGCCTATGTCCGACAGCTCGCGCTCTATCGC
GCGGTGCTGGCCAGGCTGTACCCGGAATTACCGGTCAAAGCGGCGCTGCTCTGGACCGAGACGCCTGAAATGATGGAGAT
TTCGGCCCTAGCGCTCGATGCCGGGCTGGAAGCGATCATCTCGATGTGA

Upstream 100 bases:

>100_bases
CGCTGGACCTGCCGATGTGGAAGACGCGCTACGGCGCTTACGACGATCTCGCCCGAATCAAGGAATGGTCGGCGGCGGGC
GGGTTGGGAATCGAGGAATG

Downstream 100 bases:

>100_bases
GAAACCTTGACCCGGCAAGGTCGCATTCTTAACTTGGCAGATAGTTTCAGGCGCATTCTTTTGCAGTGCGCGATCTCATC
AAGGCAACGAGGTATTCCAT

Product: UvrD/REP helicase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1162_residues
MKAPRPVHPDASARQQRASDPATSVFVSANAGSGKTHVLVQRVIRLLLNGVDPARILCITFTKAAAANMSERVFSTLGHW
VTLDDEALNAALRDTGIAQPDAWSRQRARKLFAAALETPGGLKVQTIHALCTRLLQQFPFEARVPARFSVLDERDQTGMM
ERASISVMLDASQNPDSPAGRALQYAMGAAADTTLRDVVNQACLSRDHFMAWTEDRGIEQAISDVADALDVDPAERVEDV
EREIVDGPNLPISEWEALAAILETGNKSDIEQARRLREAHAMIGEAAQADRYLDVFLTGDSVLRKSFVTKKISDVRPDIA
AMLDRESQRVIALLERRRALTIRDRTQSLLVIATAVAANYRREKQERGLLDYDDLIDKTLAMLDQTSPGWVHYKLDRGVD
HVLIDEAQDTSPKQWDIVERIIADFTTGEGAREGVRRTVFAVGDEKQSIFSFQGAAPREFDERRSKLERKFRDAELPFRK
EDFIYSFRSGKTILESVDYVFRDAAIYTSIHAVGAHPVHESLADAAPGVVDLWSLEERDARQQIEGWRAPFDAVSATSSE
VKLARRIRNEVKTLIAQGTMTGHLGDRRPLRYGDILVLVRRRGNAFDAIIQALKQSGIPVAGADRLKLTEHIAIIDLMNL
ADALLLPRDDLALAVALKSPLFGLDDDDLFAIAHNRKGSLRDALADHATANDKFRDAFERLKMCETRAAHESPFAFYAWL
LGGDGGRRRILRRLGHEANDALDEFLELALTYERKAPASQQGFMAWLRAADTDVKRDMEISRDEVRVMTVHGAKGLEASV
VFLADTVTSPADTERLNLIRMSRGNAPAHAAGVTVWAGRKAEDPPDVVNARAAMIAETEHEYRRLLYVAMTRAADRLIVG
GCKPGNRKDVREHAWYDLIDKGLGKSGLAMREIETAAGTVKRFTRPGETEPDAAGPATPVAAAPIALPPWLHSMAAPEAP
AGPSLRPSDADDNAHHRIWPGESPDQRRRALLRGTLVHRLLQSLPDVPVDRRGDTALAYLGRNARDWSEAERDALAAQVL
ALIGDSQFAPVFTDGSRAEVAIAGRLTTRRGDPVLVSGQIDRLVVTREAVLIVDFKTNHAPPRNPADAPPAYVRQLALYR
AVLARLYPELPVKAALLWTETPEMMEISALALDAGLEAIISM

Sequences:
NA

Specific function: NA

COG id: COG1074

COG function: function code L; ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA