| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is recG [H]
Identifier: 92115360
GI number: 92115360
Start: 3617974
End: 3620067
Strand: Direct
Name: recG [H]
Synonym: Csal_3245
Alternate gene names: 92115360
Gene position: 3617974-3620067 (Clockwise)
Preceding gene: 92115359
Following gene: 92115366
Centisome position: 97.87
GC content: 68.15
Gene sequence:
>2094_bases ATGAGCACCGAGACTCAGGCACTGGACGCACCGGTCGGCGAACTCTCCGGGGTGGGCGAGGCATTGACAGCCAAGCTCGC CCGGCTGGGTATCGTCAGTATCGCCGACATGCTCTTCCATCTGCCGTTGCGGTATCAGGACCGTACGCGCATCACGCCGA TCGGGACCCTGCGCGCCGGCACCGAGGCCGTGGTCGAGGGCGAAATCGCCGCCGCGGATATCGTCAAGGGACGACGGCGC AGCCTGCTGGTGCGTCTCAAGGATGGCTCGGGAATTCTCAGCCTGCGGTTCTTTCATTTCTCGCCCGCGCAGCAGCAGCA GTTCGTGCGCGGCATGCGGGTGCGCGCGTTCGGCGAGGCGCGTGCCGGGGCCACGGGGCTGGAGATCTACCACCCCGAAT ACCGCCTGCTGCGTCAGGAAGACGCCCCGGTCGAGGAACACCTGACACCGATCTACCCCACCACCGAGGGGCTGGCCCAG CCCCGCCTGAGGGGCTTGGTCCAGCAGGCGCTCAAGCGCCTCGACGATGATGATGCGGGACTGCCGGACTGGATTCCCGA TAGCCTGCGCCAGCGCTTTCGCTTGCCGGGCCTGGTCGAGTCGCTGCGTTACCTGCACGAACCTCCGCCCGACGCACCGG TGGCGCAACTCGCCGAGGGCAAGCATCCGGCGCAACGCCGCCTGGCCCTGGAAGAACTACTCGCGCACCAGCTCAGCCTG CGCCAGGTACGCCTGCGCATCCAGACGGACAGCGCCCCATCCCTGGGCGGCGGCCGTGGCCTGCAAGCGCGTTTCTTGAC CCAATTGCCGTTCTCGCTGACCGGTGCGCAGCGGCGAGTGCTCGACGAAATCGGCCACGACCTGGAACGCGCCGTGCCCA TGCTGCGCCTGGTGCAGGGCGATGTCGGCTCGGGCAAGACCGTGGTCGCCGCAATGGCGGCCCTGGCCGCCATCGCCGGT GGCTGCCAGGCGGCGATCATGGCGCCCACCGAGATCCTCGCCGAGCAGCACTATCGCAATTTCAGCGACTGGTTCGCGCC ACTGGGCATCGAGGTCGGCTGGCTGTCCGGCAAGCTCAAGGGCAAGGCGCGCCTGGACACCAAGGCGGCCATCGCCGATG GTCGTGTGCAGGTCGCCGTGGGCACGCATGCACTGTTCCAGGACGATGTGCGGTTTCACCGCCTGGGCTTGGCGATCATC GACGAGCAGCACCGTTTCGGCGTCCATCAGCGCCTGGCGTTGCGTCAGAAGGGCGAAGCCGGCGGCCTCACCCCGCATCA GTTGATCATGACCGCCACCCCGATCCCGCGCACGCTGGCGATGAGCGCCTATGCCGATCTCGACCTGTCGATGATCGACG AATTGCCGCCCGGTCGAACGCCGGTGCAAACGGTGGCGGTGCCCGACGAACGCCGCCCCGAGGTGGTCGAGCGCATCCAG CGCGCCTGCGCCGAGGGGCATCAAGCCTATTGGGTATGCACGCTGATCGAGGAGTCCGAGGCACTGACGTGCCAGGCCGC CGAGGCGACCCATGCCCACCTGGGCGAGGCTCTGCCCGACCTGGCGGTCGGCCTGGTGCACGGGCGCATGAAAGCCGGCG AGAAAGCCGAGGTCATGGCCGCCTTCACGTCCGGCGAGCTCGATCTGCTGGTCGCCACCACGGTGATCGAGGTCGGGGTG GACGTGCCCAACGCCAGCCTGATGATCATCGAGAATCCCGAGCGCCTGGGGCTGTCGCAGCTGCATCAGTTGCGTGGCCG CGTGGGACGCGGCGCGACCGAAAGCTTCTGTGTGCTGCTGTATCATCCGCCGCTGTCGCACCATTCGCGCGAGCGGCTCG GGGTGATGCGCGACACGACCGACGGCTTCCGCATCGCCGAGAAGGATCTCGAGTTGCGCGGCCCCGGCGAGGTACTCGGC ACGCGTCAGACGGGCCTGGCGCAGATGAAGATCGCCGACCTGGAGCGCGATCGCGACCTGCTCGACACCATCAGTCCCCT GGCACGCGCGCTACTCGACGAGGCGCCCGAGGCGGCCACGCCGTTGATTCGTCGCTGGCTGGGCGAAGACGCCGGGCATT ACGGACAGGTATGA
Upstream 100 bases:
>100_bases CGGTGGCCATCGCCTGGCGCGCCAGCTTCCCGCGGCCCAAGGCCATCGATGCCCTGACCGCGGCCATCGACGCATGCCAG CAGCAAAGCATCCAGGCGGC
Downstream 100 bases:
>100_bases CGTCATGGACGCGGCCATGCGGGAAGGCGCGTCAGGATGAGGGCGGTTCATCGTCGTCGGTCTGGAGGCCCGCCTGCCGC TCCCACTTGCCGGCCTTGGC
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 697; Mature: 696
Protein sequence:
>697_residues MSTETQALDAPVGELSGVGEALTAKLARLGIVSIADMLFHLPLRYQDRTRITPIGTLRAGTEAVVEGEIAAADIVKGRRR SLLVRLKDGSGILSLRFFHFSPAQQQQFVRGMRVRAFGEARAGATGLEIYHPEYRLLRQEDAPVEEHLTPIYPTTEGLAQ PRLRGLVQQALKRLDDDDAGLPDWIPDSLRQRFRLPGLVESLRYLHEPPPDAPVAQLAEGKHPAQRRLALEELLAHQLSL RQVRLRIQTDSAPSLGGGRGLQARFLTQLPFSLTGAQRRVLDEIGHDLERAVPMLRLVQGDVGSGKTVVAAMAALAAIAG GCQAAIMAPTEILAEQHYRNFSDWFAPLGIEVGWLSGKLKGKARLDTKAAIADGRVQVAVGTHALFQDDVRFHRLGLAII DEQHRFGVHQRLALRQKGEAGGLTPHQLIMTATPIPRTLAMSAYADLDLSMIDELPPGRTPVQTVAVPDERRPEVVERIQ RACAEGHQAYWVCTLIEESEALTCQAAEATHAHLGEALPDLAVGLVHGRMKAGEKAEVMAAFTSGELDLLVATTVIEVGV DVPNASLMIIENPERLGLSQLHQLRGRVGRGATESFCVLLYHPPLSHHSRERLGVMRDTTDGFRIAEKDLELRGPGEVLG TRQTGLAQMKIADLERDRDLLDTISPLARALLDEAPEAATPLIRRWLGEDAGHYGQV
Sequences:
>Translated_697_residues MSTETQALDAPVGELSGVGEALTAKLARLGIVSIADMLFHLPLRYQDRTRITPIGTLRAGTEAVVEGEIAAADIVKGRRR SLLVRLKDGSGILSLRFFHFSPAQQQQFVRGMRVRAFGEARAGATGLEIYHPEYRLLRQEDAPVEEHLTPIYPTTEGLAQ PRLRGLVQQALKRLDDDDAGLPDWIPDSLRQRFRLPGLVESLRYLHEPPPDAPVAQLAEGKHPAQRRLALEELLAHQLSL RQVRLRIQTDSAPSLGGGRGLQARFLTQLPFSLTGAQRRVLDEIGHDLERAVPMLRLVQGDVGSGKTVVAAMAALAAIAG GCQAAIMAPTEILAEQHYRNFSDWFAPLGIEVGWLSGKLKGKARLDTKAAIADGRVQVAVGTHALFQDDVRFHRLGLAII DEQHRFGVHQRLALRQKGEAGGLTPHQLIMTATPIPRTLAMSAYADLDLSMIDELPPGRTPVQTVAVPDERRPEVVERIQ RACAEGHQAYWVCTLIEESEALTCQAAEATHAHLGEALPDLAVGLVHGRMKAGEKAEVMAAFTSGELDLLVATTVIEVGV DVPNASLMIIENPERLGLSQLHQLRGRVGRGATESFCVLLYHPPLSHHSRERLGVMRDTTDGFRIAEKDLELRGPGEVLG TRQTGLAQMKIADLERDRDLLDTISPLARALLDEAPEAATPLIRRWLGEDAGHYGQV >Mature_696_residues STETQALDAPVGELSGVGEALTAKLARLGIVSIADMLFHLPLRYQDRTRITPIGTLRAGTEAVVEGEIAAADIVKGRRRS LLVRLKDGSGILSLRFFHFSPAQQQQFVRGMRVRAFGEARAGATGLEIYHPEYRLLRQEDAPVEEHLTPIYPTTEGLAQP RLRGLVQQALKRLDDDDAGLPDWIPDSLRQRFRLPGLVESLRYLHEPPPDAPVAQLAEGKHPAQRRLALEELLAHQLSLR QVRLRIQTDSAPSLGGGRGLQARFLTQLPFSLTGAQRRVLDEIGHDLERAVPMLRLVQGDVGSGKTVVAAMAALAAIAGG CQAAIMAPTEILAEQHYRNFSDWFAPLGIEVGWLSGKLKGKARLDTKAAIADGRVQVAVGTHALFQDDVRFHRLGLAIID EQHRFGVHQRLALRQKGEAGGLTPHQLIMTATPIPRTLAMSAYADLDLSMIDELPPGRTPVQTVAVPDERRPEVVERIQR ACAEGHQAYWVCTLIEESEALTCQAAEATHAHLGEALPDLAVGLVHGRMKAGEKAEVMAAFTSGELDLLVATTVIEVGVD VPNASLMIIENPERLGLSQLHQLRGRVGRGATESFCVLLYHPPLSHHSRERLGVMRDTTDGFRIAEKDLELRGPGEVLGT RQTGLAQMKIADLERDRDLLDTISPLARALLDEAPEAATPLIRRWLGEDAGHYGQV
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=686, Percent_Identity=60.3498542274053, Blast_Score=771, Evalue=0.0, Organism=Escherichia coli, GI1787357, Length=386, Percent_Identity=38.60103626943, Blast_Score=242, Evalue=6e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 76188; Mature: 76056
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTETQALDAPVGELSGVGEALTAKLARLGIVSIADMLFHLPLRYQDRTRITPIGTLRAG CCCCCCHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC TEAVVEGEIAAADIVKGRRRSLLVRLKDGSGILSLRFFHFSPAQQQQFVRGMRVRAFGEA CHHHHCCCHHHHHHHCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCC RAGATGLEIYHPEYRLLRQEDAPVEEHLTPIYPTTEGLAQPRLRGLVQQALKRLDDDDAG CCCCCCEEEECCHHHHHHCCCCCHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCC LPDWIPDSLRQRFRLPGLVESLRYLHEPPPDAPVAQLAEGKHPAQRRLALEELLAHQLSL CCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHH RQVRLRIQTDSAPSLGGGRGLQARFLTQLPFSLTGAQRRVLDEIGHDLERAVPMLRLVQG HHHEEEEECCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DVGSGKTVVAAMAALAAIAGGCQAAIMAPTEILAEQHYRNFSDWFAPLGIEVGWLSGKLK CCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCHHHHHHHCCCEEEEECCCCC GKARLDTKAAIADGRVQVAVGTHALFQDDVRFHRLGLAIIDEQHRFGVHQRLALRQKGEA CCCCCCCHHHCCCCEEEEEECCHHHHHHCHHHHHHHHHEECCHHHHCHHHHHHHHHCCCC GGLTPHQLIMTATPIPRTLAMSAYADLDLSMIDELPPGRTPVQTVAVPDERRPEVVERIQ CCCCHHHEEEECCCCCHHHHHHHHHCCCHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHH RACAEGHQAYWVCTLIEESEALTCQAAEATHAHLGEALPDLAVGLVHGRMKAGEKAEVMA HHHHCCCCEEEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE AFTSGELDLLVATTVIEVGVDVPNASLMIIENPERLGLSQLHQLRGRVGRGATESFCVLL EECCCCEEEHHHHHHHHHCCCCCCCEEEEEECCHHCCHHHHHHHHHHCCCCCCCCEEEEE YHPPLSHHSRERLGVMRDTTDGFRIAEKDLELRGPGEVLGTRQTGLAQMKIADLERDRDL ECCCCCCCCHHHHCCCCCCCCCCEEECCCCCCCCCCHHCCCCCCCHHHHHHHHHHCCHHH LDTISPLARALLDEAPEAATPLIRRWLGEDAGHYGQV HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure STETQALDAPVGELSGVGEALTAKLARLGIVSIADMLFHLPLRYQDRTRITPIGTLRAG CCCCCHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC TEAVVEGEIAAADIVKGRRRSLLVRLKDGSGILSLRFFHFSPAQQQQFVRGMRVRAFGEA CHHHHCCCHHHHHHHCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCC RAGATGLEIYHPEYRLLRQEDAPVEEHLTPIYPTTEGLAQPRLRGLVQQALKRLDDDDAG CCCCCCEEEECCHHHHHHCCCCCHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCC LPDWIPDSLRQRFRLPGLVESLRYLHEPPPDAPVAQLAEGKHPAQRRLALEELLAHQLSL CCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHH RQVRLRIQTDSAPSLGGGRGLQARFLTQLPFSLTGAQRRVLDEIGHDLERAVPMLRLVQG HHHEEEEECCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DVGSGKTVVAAMAALAAIAGGCQAAIMAPTEILAEQHYRNFSDWFAPLGIEVGWLSGKLK CCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCHHHHHHHCCCEEEEECCCCC GKARLDTKAAIADGRVQVAVGTHALFQDDVRFHRLGLAIIDEQHRFGVHQRLALRQKGEA CCCCCCCHHHCCCCEEEEEECCHHHHHHCHHHHHHHHHEECCHHHHCHHHHHHHHHCCCC GGLTPHQLIMTATPIPRTLAMSAYADLDLSMIDELPPGRTPVQTVAVPDERRPEVVERIQ CCCCHHHEEEECCCCCHHHHHHHHHCCCHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHH RACAEGHQAYWVCTLIEESEALTCQAAEATHAHLGEALPDLAVGLVHGRMKAGEKAEVMA HHHHCCCCEEEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE AFTSGELDLLVATTVIEVGVDVPNASLMIIENPERLGLSQLHQLRGRVGRGATESFCVLL EECCCCEEEHHHHHHHHHCCCCCCCEEEEEECCHHCCHHHHHHHHHHCCCCCCCCEEEEE YHPPLSHHSRERLGVMRDTTDGFRIAEKDLELRGPGEVLGTRQTGLAQMKIADLERDRDL ECCCCCCCCHHHHCCCCCCCCCCEEECCCCCCCCCCHHCCCCCCCHHHHHHHHHHCCHHH LDTISPLARALLDEAPEAATPLIRRWLGEDAGHYGQV HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]