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The map label for this gene is yycB [H]

Identifier: 92115333

GI number: 92115333

Start: 3587228

End: 3588451

Strand: Direct

Name: yycB [H]

Synonym: Csal_3218

Alternate gene names: 92115333

Gene position: 3587228-3588451 (Clockwise)

Preceding gene: 92115332

Following gene: 92115342

Centisome position: 97.04

GC content: 69.04

Gene sequence:

>1224_bases
ATGGCTCTCTTGTCGACTTCTGCGATGCCCCGTCGGGGCGTTCTGACCCTCGTCGCGCTGCTGCTGGTGGCGCTCAACCT
TCGTCCGGCGCTGACCAGCGTGTCGCCGGTGCTCGGCAACATCGGTGAGGCGCTGGCGCTCTCCCCCAGTTGGCAGGGCA
TCCTGACCACATTGCCGGTGCTGTTTCTGGGTCTGGCGGCGCCGCTGGCACCACGCCTGGTCCGCCGGATCGGCCCTGAA
CGCAGCGTGTTTGCAGCCCTCGTGGTACTAGCAGTGGCACTGCTCGTGCGGCCCTATATCGGCACGATGGGGCTCTTTCT
GGGCACGGCGGTCGCCGGCGGCTGCATCGGGATCATCGGGGTGCTGCTGCCGGGCATCGTCAAGCGGGATTTTCCTCGAC
GCGTCAGCATCATGACCGGCCTCTACACCGTGGCGCTCAATCTGGGTGCTTCGACTGCCGCGGGCACCACGGAGCCGCTG
CGTCAACTGCTGGATGACGTTGCGCAAGGGGCTTCCCTCAGTGCCTGGCAGGGTGCGCTGGCGTTCTGGTTGCTGCCGGC
GGTGATCGCCGCGCTGCTGTGGCTGCCGCAGCTCAGGGGCACCAAGCCCACTCGCGTTCCCGCGCGGCGCGGCGCGCGGC
TGCGCCACGATTCACTGGCCTGGCAAGTATCGCTGTTCATGGGGCTGCAGTCGTCACTGGCATACATCGTGTTCGGCTGG
CTGCCGACGATCCTGCAGGATCGCGGACTGACGGCCGTCACCGCAGGACTGGCGCTATCGGTGTCGATCCTGCTGCAGGT
GTCCACCGCGATCCTGGCGCCTTGGATCGGCAGCCGCATGCGCGACCAGCGGACGGTGCTGGCCGTCGTGATGACGCTCA
CGCTGATCGGGCTGCTGGGCTGTCTCTACGCGCCGATCGGCAGTGTGTGGCTGTGGATCGTGGTGCTGGGGCTGGGCCAG
GGCGGCACTTTCAGCATGGCGTTGACGCTGCTGGCCCTGCGCGCGCCGGACGCCACGACCGCCGCCAGCCTCTCGGCGAT
GGCCCAGGGCATCGGCTACACCCTGGCGGCAGCGGGGCCGCTGCTGGTCGGGGTGCTGCACGACTGGAGCGGCGGCTGGA
ACGTGGTGGGCGTTCTGGTGAGCGCGATCGCCCTCGGGGCACTGGTCATGGCGCTGGGCGCGGGGCGCAACCGGCAGGTG
GCGTCGACCCAGGGGGTGGATTGA

Upstream 100 bases:

>100_bases
GCCCTCGACCATTGGCGTAGAACCATCCCGGTTTTGGCCGTAATCGGCTACCCTTGCGTCCTCGGCTTGCCGCCGATATG
GCTTCTTTCGATTTCCAAGG

Downstream 100 bases:

>100_bases
AGGGGTCGGGCCGACGGCCGATGACAGCACGCACGAGGTGCCTCACCCCCGCCGCCACCGGAAATAACGCGCCAGCCAGC
CGAGCAGGCGCTCGGGCTTG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MALLSTSAMPRRGVLTLVALLLVALNLRPALTSVSPVLGNIGEALALSPSWQGILTTLPVLFLGLAAPLAPRLVRRIGPE
RSVFAALVVLAVALLVRPYIGTMGLFLGTAVAGGCIGIIGVLLPGIVKRDFPRRVSIMTGLYTVALNLGASTAAGTTEPL
RQLLDDVAQGASLSAWQGALAFWLLPAVIAALLWLPQLRGTKPTRVPARRGARLRHDSLAWQVSLFMGLQSSLAYIVFGW
LPTILQDRGLTAVTAGLALSVSILLQVSTAILAPWIGSRMRDQRTVLAVVMTLTLIGLLGCLYAPIGSVWLWIVVLGLGQ
GGTFSMALTLLALRAPDATTAASLSAMAQGIGYTLAAAGPLLVGVLHDWSGGWNVVGVLVSAIALGALVMALGAGRNRQV
ASTQGVD

Sequences:

>Translated_407_residues
MALLSTSAMPRRGVLTLVALLLVALNLRPALTSVSPVLGNIGEALALSPSWQGILTTLPVLFLGLAAPLAPRLVRRIGPE
RSVFAALVVLAVALLVRPYIGTMGLFLGTAVAGGCIGIIGVLLPGIVKRDFPRRVSIMTGLYTVALNLGASTAAGTTEPL
RQLLDDVAQGASLSAWQGALAFWLLPAVIAALLWLPQLRGTKPTRVPARRGARLRHDSLAWQVSLFMGLQSSLAYIVFGW
LPTILQDRGLTAVTAGLALSVSILLQVSTAILAPWIGSRMRDQRTVLAVVMTLTLIGLLGCLYAPIGSVWLWIVVLGLGQ
GGTFSMALTLLALRAPDATTAASLSAMAQGIGYTLAAAGPLLVGVLHDWSGGWNVVGVLVSAIALGALVMALGAGRNRQV
ASTQGVD
>Mature_406_residues
ALLSTSAMPRRGVLTLVALLLVALNLRPALTSVSPVLGNIGEALALSPSWQGILTTLPVLFLGLAAPLAPRLVRRIGPER
SVFAALVVLAVALLVRPYIGTMGLFLGTAVAGGCIGIIGVLLPGIVKRDFPRRVSIMTGLYTVALNLGASTAAGTTEPLR
QLLDDVAQGASLSAWQGALAFWLLPAVIAALLWLPQLRGTKPTRVPARRGARLRHDSLAWQVSLFMGLQSSLAYIVFGWL
PTILQDRGLTAVTAGLALSVSILLQVSTAILAPWIGSRMRDQRTVLAVVMTLTLIGLLGCLYAPIGSVWLWIVVLGLGQG
GTFSMALTLLALRAPDATTAASLSAMAQGIGYTLAAAGPLLVGVLHDWSGGWNVVGVLVSAIALGALVMALGAGRNRQVA
STQGVD

Specific function: Unknown

COG id: COG2807

COG function: function code P; Cyanate permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Cyanate porter (TC 2.A.1.17) family [H]

Homologues:

Organism=Escherichia coli, GI1788092, Length=402, Percent_Identity=37.5621890547264, Blast_Score=218, Evalue=5e-58,
Organism=Escherichia coli, GI1786536, Length=359, Percent_Identity=32.8690807799443, Blast_Score=128, Evalue=5e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004747
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42267; Mature: 42136

Theoretical pI: Translated: 11.92; Mature: 11.92

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ALLSTSAMPRRGVLTLVALLLVALNLRPALTSVSPVLGNIGEALALSPSWQGILTTLPV
CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHH
LFLGLAAPLAPRLVRRIGPERSVFAALVVLAVALLVRPYIGTMGLFLGTAVAGGCIGIIG
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLPGIVKRDFPRRVSIMTGLYTVALNLGASTAAGTTEPLRQLLDDVAQGASLSAWQGAL
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
AFWLLPAVIAALLWLPQLRGTKPTRVPARRGARLRHDSLAWQVSLFMGLQSSLAYIVFGW
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LPTILQDRGLTAVTAGLALSVSILLQVSTAILAPWIGSRMRDQRTVLAVVMTLTLIGLLG
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CLYAPIGSVWLWIVVLGLGQGGTFSMALTLLALRAPDATTAASLSAMAQGIGYTLAAAGP
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHH
LLVGVLHDWSGGWNVVGVLVSAIALGALVMALGAGRNRQVASTQGVD
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]