Click here to switch to the map view.

The map label for this gene is yaaA [C]

Identifier: 92115161

GI number: 92115161

Start: 3390435

End: 3391223

Strand: Direct

Name: yaaA [C]

Synonym: Csal_3046

Alternate gene names: 92115161

Gene position: 3390435-3391223 (Clockwise)

Preceding gene: 92115160

Following gene: 92115162

Centisome position: 91.72

GC content: 61.85

Gene sequence:

>789_bases
ATGCTGAGCGTGATATCACCGGCCAAGACGCTGGATTTCGAGACATCGCCGACGACGGCGACCTATACCCAACCCCAGTA
CCTCGAGCAAAGCGCCGAGCTGATCGAGATCCTGCGCGATTATTCGCCCCAGCGACTGTCCGAGCTGATGGGCATCAGCG
ACAAGCTGGCAGGACTGAACGCTGCGCGCTTCGCCGAGTGGGCTCCTCCCTTTTCGCCGGAGAACGCCAAGCCGGCCGTG
CAGGCTTTCCAGGGCGACGTCTATCAGGGGCTGGATGCGGCCGCGTTCAGCGAGGCGGACAACGAAGTGGCACAGCGACG
CCTGCGAATTCTCTCGGGTCTGTATGGACTGCTGCGCCCCCTCGACTTGATCCAGCCCTATCGGCTCGAAATGGGCACCA
AGCTGGCCAACCGGGCCGGCAAGGATCTTTACGCCTTCTGGCGCGAACGGCTCACTCAGGATCTTTCCAGGGCCGTGGAA
GACAGCGGCACCCCTGTCCTGGTCAACCTGGCCTCCAACGAGTATTTCAAGGCCATCGATGCCAAGCGCTTGACCTGTCG
TGTCATCACGCCAGTCTTCAAGGACGAGAAGAACGGCCAGTTCAAGATCGTCAGCTTCTATGCCAAGAAGGCACGCGGCC
TCATGAGCGCCTGGATGATCAAGGAGCGCATCGATACCCCCGACGACCTGAAGGGCTTCGACGTTGCCGGTTATGCCTTC
AATGCGGGCCTTTCCGAGGGCGATACCTGGGTCTTCACGCGCCGCGAGAGCGACGTGGCGGGCGCCTGA

Upstream 100 bases:

>100_bases
CGTGTCTATCGAAGCGATAGACACGCTGTCATCGGCCCCACCGGGACAGCTTGTTATACTGCTCGTAACGAGTCACACGA
TTTTGACGCGAGGACCGTGC

Downstream 100 bases:

>100_bases
TCGTGGCGGCGGGATCGCGGCATATCCCCGATATCCCCTCCGACCCACAGCGCTGATATCTTCAACGATGAATCCCCGCT
AGAATCGAGAATCCGGGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MLSVISPAKTLDFETSPTTATYTQPQYLEQSAELIEILRDYSPQRLSELMGISDKLAGLNAARFAEWAPPFSPENAKPAV
QAFQGDVYQGLDAAAFSEADNEVAQRRLRILSGLYGLLRPLDLIQPYRLEMGTKLANRAGKDLYAFWRERLTQDLSRAVE
DSGTPVLVNLASNEYFKAIDAKRLTCRVITPVFKDEKNGQFKIVSFYAKKARGLMSAWMIKERIDTPDDLKGFDVAGYAF
NAGLSEGDTWVFTRRESDVAGA

Sequences:

>Translated_262_residues
MLSVISPAKTLDFETSPTTATYTQPQYLEQSAELIEILRDYSPQRLSELMGISDKLAGLNAARFAEWAPPFSPENAKPAV
QAFQGDVYQGLDAAAFSEADNEVAQRRLRILSGLYGLLRPLDLIQPYRLEMGTKLANRAGKDLYAFWRERLTQDLSRAVE
DSGTPVLVNLASNEYFKAIDAKRLTCRVITPVFKDEKNGQFKIVSFYAKKARGLMSAWMIKERIDTPDDLKGFDVAGYAF
NAGLSEGDTWVFTRRESDVAGA
>Mature_262_residues
MLSVISPAKTLDFETSPTTATYTQPQYLEQSAELIEILRDYSPQRLSELMGISDKLAGLNAARFAEWAPPFSPENAKPAV
QAFQGDVYQGLDAAAFSEADNEVAQRRLRILSGLYGLLRPLDLIQPYRLEMGTKLANRAGKDLYAFWRERLTQDLSRAVE
DSGTPVLVNLASNEYFKAIDAKRLTCRVITPVFKDEKNGQFKIVSFYAKKARGLMSAWMIKERIDTPDDLKGFDVAGYAF
NAGLSEGDTWVFTRRESDVAGA

Specific function: Unknown

COG id: COG3022

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0246 family

Homologues:

Organism=Escherichia coli, GI1786187, Length=256, Percent_Identity=55.46875, Blast_Score=292, Evalue=1e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3046_CHRSD (Q1QT18)

Other databases:

- EMBL:   CP000285
- RefSeq:   YP_575089.1
- STRING:   Q1QT18
- GeneID:   4028037
- GenomeReviews:   CP000285_GR
- KEGG:   csa:Csal_3046
- NMPDR:   fig|290398.4.peg.2193
- eggNOG:   COG3022
- HOGENOM:   HBG672409
- OMA:   ISFYAKR
- BioCyc:   CSAL290398:CSAL_3046-MONOMER
- HAMAP:   MF_00652
- InterPro:   IPR005583

Pfam domain/function: PF03883 DUF328

EC number: NA

Molecular weight: Translated: 29238; Mature: 29238

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSVISPAKTLDFETSPTTATYTQPQYLEQSAELIEILRDYSPQRLSELMGISDKLAGLN
CCCCCCCHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHCCC
AARFAEWAPPFSPENAKPAVQAFQGDVYQGLDAAAFSEADNEVAQRRLRILSGLYGLLRP
HHHHHHCCCCCCCCCCCHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDLIQPYRLEMGTKLANRAGKDLYAFWRERLTQDLSRAVEDSGTPVLVNLASNEYFKAID
HHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHH
AKRLTCRVITPVFKDEKNGQFKIVSFYAKKARGLMSAWMIKERIDTPDDLKGFDVAGYAF
HHHHHHEEECHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
NAGLSEGDTWVFTRRESDVAGA
ECCCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MLSVISPAKTLDFETSPTTATYTQPQYLEQSAELIEILRDYSPQRLSELMGISDKLAGLN
CCCCCCCHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHCCC
AARFAEWAPPFSPENAKPAVQAFQGDVYQGLDAAAFSEADNEVAQRRLRILSGLYGLLRP
HHHHHHCCCCCCCCCCCHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDLIQPYRLEMGTKLANRAGKDLYAFWRERLTQDLSRAVEDSGTPVLVNLASNEYFKAID
HHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHH
AKRLTCRVITPVFKDEKNGQFKIVSFYAKKARGLMSAWMIKERIDTPDDLKGFDVAGYAF
HHHHHHEEECHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
NAGLSEGDTWVFTRRESDVAGA
ECCCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA