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The map label for this gene is osmF [H]

Identifier: 92115059

GI number: 92115059

Start: 3280833

End: 3281765

Strand: Direct

Name: osmF [H]

Synonym: Csal_2943

Alternate gene names: 92115059

Gene position: 3280833-3281765 (Clockwise)

Preceding gene: 92115056

Following gene: 92115060

Centisome position: 88.75

GC content: 65.17

Gene sequence:

>933_bases
ATGCCCGGAACGTTTCAACACCTCGCCACCCGCGTGCTTGGCCTGGCGGCCGTCACCGCGCTGTCGATATCGCCGGTCTT
CGCCGCCGACCCGGTACGGGTATCCTCGAAGATCGACACCGAGGGGGCCTTGCTGGGCAACATGATGGTCCAGCTCCTGG
AGCATGCCGACGTTCCCGTGGAGGAAAACCTCCAGCTCGGACCCACCAACATCGTGCGCAGCGCCCTGCTGGAAGACGAG
ATCGACCTGTATCCCGAGTACACCGGCAACGGCGCCTTCTTCACCCAGACTACCGACGATCCGGCCTGGAAACAGGCCGA
GGCGGGCTACGAGAAGATCCGTGCCTACGACAAGCAGCACAACGATCTCGTCTGGCTGACACCCGCACCGGCCAACAACA
CCTGGGCGATCGCCCTGCGTCGGGATATCGCCGACGAGCACGATCTCTCCACCATGCAGGACTTCGCGGCCTGGGTACGC
GACGGAGGCGAGGTGAAACTCGCCGGCTCGGCGGAGTTCGTGGAGAGCGATGCCGCCCTGCCCAGCTTCCAGCGTGCGTA
CGACTTCACGCTCGACCAGGAGCAACTGCTGGTGCTTTCCGGCGGCAACACGGCCGCCACCATCCGCGCGGCGGCCAATA
ATACCAGCGGTACCAACGCGGCGATGGTCTACGGCACCGATGGCGCGATCGCCGCGGCCGACCTCAGGGTCATGGACGAT
ACCCAGGGCGTACAGATGGTCTATGCGCCGGCGCCGGTGATCCGCCAGGCGACGCTCGACGCCTACCCCGAGATTCCGGA
GCTGCTCGGCCCCTTGTTCGAGGGACTCGACCGCGAGACGCTGCAGACCCTCAACAGCCGCATTCAGGTAGATGGCATGC
CGGCGAGTGACGTCGCACGCGATTACCTCGAATCGCAAGACCTGCTCGACTAA

Upstream 100 bases:

>100_bases
CACTTGTCGCCAAGCGCATTCCCTCTCGCCGCGCAAGCCGAGGATGCTAGACTCAAGGTTCGAATCGTCGCGACCCGTCA
TTTCCAAGGAGTCAGGAATC

Downstream 100 bases:

>100_bases
GCGCCACGCGTGACGTCTCCCGCCGTTTCAACGATCGGCGCCGGCCGCCTGCTCGCCAACCGCGTGCTCGTCACGCTGTT
GATCGCGGGGCTGGCCGCGG

Product: glycine betaine ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MPGTFQHLATRVLGLAAVTALSISPVFAADPVRVSSKIDTEGALLGNMMVQLLEHADVPVEENLQLGPTNIVRSALLEDE
IDLYPEYTGNGAFFTQTTDDPAWKQAEAGYEKIRAYDKQHNDLVWLTPAPANNTWAIALRRDIADEHDLSTMQDFAAWVR
DGGEVKLAGSAEFVESDAALPSFQRAYDFTLDQEQLLVLSGGNTAATIRAAANNTSGTNAAMVYGTDGAIAAADLRVMDD
TQGVQMVYAPAPVIRQATLDAYPEIPELLGPLFEGLDRETLQTLNSRIQVDGMPASDVARDYLESQDLLD

Sequences:

>Translated_310_residues
MPGTFQHLATRVLGLAAVTALSISPVFAADPVRVSSKIDTEGALLGNMMVQLLEHADVPVEENLQLGPTNIVRSALLEDE
IDLYPEYTGNGAFFTQTTDDPAWKQAEAGYEKIRAYDKQHNDLVWLTPAPANNTWAIALRRDIADEHDLSTMQDFAAWVR
DGGEVKLAGSAEFVESDAALPSFQRAYDFTLDQEQLLVLSGGNTAATIRAAANNTSGTNAAMVYGTDGAIAAADLRVMDD
TQGVQMVYAPAPVIRQATLDAYPEIPELLGPLFEGLDRETLQTLNSRIQVDGMPASDVARDYLESQDLLD
>Mature_309_residues
PGTFQHLATRVLGLAAVTALSISPVFAADPVRVSSKIDTEGALLGNMMVQLLEHADVPVEENLQLGPTNIVRSALLEDEI
DLYPEYTGNGAFFTQTTDDPAWKQAEAGYEKIRAYDKQHNDLVWLTPAPANNTWAIALRRDIADEHDLSTMQDFAAWVRD
GGEVKLAGSAEFVESDAALPSFQRAYDFTLDQEQLLVLSGGNTAATIRAAANNTSGTNAAMVYGTDGAIAAADLRVMDDT
QGVQMVYAPAPVIRQATLDAYPEIPELLGPLFEGLDRETLQTLNSRIQVDGMPASDVARDYLESQDLLD

Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=292, Percent_Identity=54.1095890410959, Blast_Score=336, Evalue=1e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 33559; Mature: 33428

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGTFQHLATRVLGLAAVTALSISPVFAADPVRVSSKIDTEGALLGNMMVQLLEHADVPV
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCC
EENLQLGPTNIVRSALLEDEIDLYPEYTGNGAFFTQTTDDPAWKQAEAGYEKIRAYDKQH
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCC
NDLVWLTPAPANNTWAIALRRDIADEHDLSTMQDFAAWVRDGGEVKLAGSAEFVESDAAL
CCEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHCCCCC
PSFQRAYDFTLDQEQLLVLSGGNTAATIRAAANNTSGTNAAMVYGTDGAIAAADLRVMDD
CCHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEEEEEEEC
TQGVQMVYAPAPVIRQATLDAYPEIPELLGPLFEGLDRETLQTLNSRIQVDGMPASDVAR
CCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCEEEECCCCHHHHHH
DYLESQDLLD
HHHHHHCCCC
>Mature Secondary Structure 
PGTFQHLATRVLGLAAVTALSISPVFAADPVRVSSKIDTEGALLGNMMVQLLEHADVPV
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCC
EENLQLGPTNIVRSALLEDEIDLYPEYTGNGAFFTQTTDDPAWKQAEAGYEKIRAYDKQH
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCC
NDLVWLTPAPANNTWAIALRRDIADEHDLSTMQDFAAWVRDGGEVKLAGSAEFVESDAAL
CCEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHCCCCC
PSFQRAYDFTLDQEQLLVLSGGNTAATIRAAANNTSGTNAAMVYGTDGAIAAADLRVMDD
CCHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEEEEEEEC
TQGVQMVYAPAPVIRQATLDAYPEIPELLGPLFEGLDRETLQTLNSRIQVDGMPASDVAR
CCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCEEEECCCCHHHHHH
DYLESQDLLD
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]