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The map label for this gene is higB-1 [H]

Identifier: 92114997

GI number: 92114997

Start: 3212084

End: 3212365

Strand: Direct

Name: higB-1 [H]

Synonym: Csal_2880

Alternate gene names: 92114997

Gene position: 3212084-3212365 (Clockwise)

Preceding gene: 92114996

Following gene: 92114998

Centisome position: 86.89

GC content: 51.06

Gene sequence:

>282_bases
GTGATCAAAAGCTTCAAGGATAAACAAACTGCCACCATTGCAGCTGGCAAGGTCGCTCGAAAGCTTCCACACGACATGCA
ACGCACCGCCTTGAAAAAGCTGCGCCAATTGGATGCCGCTGCTCAACTCGACGACCTACGCATTCCCCCAGGTAACCGTT
TGGAAGCGCTGCAAGGTAATCGCGAGGGACAATACAGCATTCGTATCAACGATCAGTGGCGAATTTGTTTTCGGTTCGAG
AGCGGCAACGCTCATGATGTCGAAATCATCGATTACCACTGA

Upstream 100 bases:

>100_bases
TTACGCCATACGTCGCTAGCCTTGATGATCTCTTCGACCAAATATAACGCATTGCGTCATATGCTGCTATGCGTTATATT
TTGAAAAAAAGGAGGCTGGC

Downstream 100 bases:

>100_bases
GGGAGGTAAAACCATGACTGAAGAACGGCTCCCCAACATTCATCCCGGTGAGATTCTGCTGGAGGATTTTATCGGCCCGT
TGGGCTTGACCAAGAATGCC

Product: plasmid maintenance system killer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MIKSFKDKQTATIAAGKVARKLPHDMQRTALKKLRQLDAAAQLDDLRIPPGNRLEALQGNREGQYSIRINDQWRICFRFE
SGNAHDVEIIDYH

Sequences:

>Translated_93_residues
MIKSFKDKQTATIAAGKVARKLPHDMQRTALKKLRQLDAAAQLDDLRIPPGNRLEALQGNREGQYSIRINDQWRICFRFE
SGNAHDVEIIDYH
>Mature_93_residues
MIKSFKDKQTATIAAGKVARKLPHDMQRTALKKLRQLDAAAQLDDLRIPPGNRLEALQGNREGQYSIRINDQWRICFRFE
SGNAHDVEIIDYH

Specific function: Inhibits translation by cleavage of mRNA [H]

COG id: COG3549

COG function: function code R; Plasmid maintenance system killer protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007711 [H]

Pfam domain/function: PF05015 Plasmid_killer [H]

EC number: NA

Molecular weight: Translated: 10703; Mature: 10703

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKSFKDKQTATIAAGKVARKLPHDMQRTALKKLRQLDAAAQLDDLRIPPGNRLEALQGN
CCCCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCC
REGQYSIRINDQWRICFRFESGNAHDVEIIDYH
CCCEEEEEECCCEEEEEEECCCCCCEEEEEECC
>Mature Secondary Structure
MIKSFKDKQTATIAAGKVARKLPHDMQRTALKKLRQLDAAAQLDDLRIPPGNRLEALQGN
CCCCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCC
REGQYSIRINDQWRICFRFESGNAHDVEIIDYH
CCCEEEEEECCCEEEEEEECCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]