| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is ycbL [C]
Identifier: 92114960
GI number: 92114960
Start: 3174615
End: 3175358
Strand: Direct
Name: ycbL [C]
Synonym: Csal_2843
Alternate gene names: 92114960
Gene position: 3174615-3175358 (Clockwise)
Preceding gene: 92114959
Following gene: 92114961
Centisome position: 85.88
GC content: 66.67
Gene sequence:
>744_bases ATGAGCCGTTTCTCGCTTCCTCGGGGCGATGCCGCGAGCTGGTATCGCACCACCTCGCTCGATGACGGGATCACGCGGAT CGACGAGCCCGCCATCAAGCCGTTCTACCGCTGCAATATCTGGCACGTGCGGGGCCGCGAGAGAGACTTGCTGGTGGACT TCGGGCTGGGTGCCGTGCCGCTGCGCCGGCAGGTCCCGCTGCTCAGCGAACGCGACCTGATCGCGGTGGCGAGCCACACC CACTTCGATCATATCGGTAGCGCGCACGAGTTCGACTGCTGCCATGTGCACGCCGCCGAGGCCGATATCCTGGCCGACCC GGACAACGCGCGCACCCTGGCCGACGCCTTTCTCGACGACGCCATGTTCGATGCCCTGCCGCCGGCCCCCTTCGAGCATC ACCGCTACCGTATCGCCCCGCCGACGCGTATCGCCACGCTCGAGGACGGCGAGATCATCGACCTCGGCGACCGCCGTTTC GAGGTCATCCATACACCGGGGCACTCCCCCGGCGGCATCGCGCTCTGGGAGGCCGCCAGCGGTATCCTGATCTCGGGCGA TCTCATCTATGACGGGCCACTGATCGAGGATGTCTATCACAGTAACGCCCGCGATTACGCCGCCAGCATGCGCCGTCTGC GCGAGTTGCCCGCGCGCGTCGTCCACGGCGGTCATTTTCCCAGTTTTTCCGGGGCACGCCTGCACGCCATGATCGATGAC TGGCTGCGCGACCACGCCCTCTGA
Upstream 100 bases:
>100_bases CGGGCAGCCTGGTGGTCGACATCGACCTGAGCCGCATCGACGCAAGCCGCGCCCATCAGGACTACCTCCAGGACCTCAGG CCGATGCCGGAGACAATCGC
Downstream 100 bases:
>100_bases AGGAGCCAACATGCAAGCACTCGACCACCAATTCATCGATAACCGCTGGGTCGCGAGTCACGGCACTCGACGCCTGGCGG TGATGGACCCGTATCATGAG
Product: beta-lactamase-like protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Zinc-Dependent Hydrolase; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Beta-Lactamase; Metallo-Beta-Lactamase Superfamily; Zn-Dependent Hydrolase Glyoxylase; Beta-Lactamase DomaiN-Containing Protein; Metallo-Beta-Lactamase Domain Protein
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MSRFSLPRGDAASWYRTTSLDDGITRIDEPAIKPFYRCNIWHVRGRERDLLVDFGLGAVPLRRQVPLLSERDLIAVASHT HFDHIGSAHEFDCCHVHAAEADILADPDNARTLADAFLDDAMFDALPPAPFEHHRYRIAPPTRIATLEDGEIIDLGDRRF EVIHTPGHSPGGIALWEAASGILISGDLIYDGPLIEDVYHSNARDYAASMRRLRELPARVVHGGHFPSFSGARLHAMIDD WLRDHAL
Sequences:
>Translated_247_residues MSRFSLPRGDAASWYRTTSLDDGITRIDEPAIKPFYRCNIWHVRGRERDLLVDFGLGAVPLRRQVPLLSERDLIAVASHT HFDHIGSAHEFDCCHVHAAEADILADPDNARTLADAFLDDAMFDALPPAPFEHHRYRIAPPTRIATLEDGEIIDLGDRRF EVIHTPGHSPGGIALWEAASGILISGDLIYDGPLIEDVYHSNARDYAASMRRLRELPARVVHGGHFPSFSGARLHAMIDD WLRDHAL >Mature_246_residues SRFSLPRGDAASWYRTTSLDDGITRIDEPAIKPFYRCNIWHVRGRERDLLVDFGLGAVPLRRQVPLLSERDLIAVASHTH FDHIGSAHEFDCCHVHAAEADILADPDNARTLADAFLDDAMFDALPPAPFEHHRYRIAPPTRIATLEDGEIIDLGDRRFE VIHTPGHSPGGIALWEAASGILISGDLIYDGPLIEDVYHSNARDYAASMRRLRELPARVVHGGHFPSFSGARLHAMIDDW LRDHAL
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI42822880, Length=248, Percent_Identity=38.3064516129032, Blast_Score=151, Evalue=6e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27635; Mature: 27504
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFSLPRGDAASWYRTTSLDDGITRIDEPAIKPFYRCNIWHVRGRERDLLVDFGLGAVP CCCCCCCCCCCCCEEEECCCCCCHHHCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCC LRRQVPLLSERDLIAVASHTHFDHIGSAHEFDCCHVHAAEADILADPDNARTLADAFLDD HHHCCCCCCCCCEEEEECCCCHHHCCCCCCCCEEEEEECCCCEEECCCCHHHHHHHHHHH AMFDALPPAPFEHHRYRIAPPTRIATLEDGEIIDLGDRRFEVIHTPGHSPGGIALWEAAS HHHHCCCCCCCCCCEEEECCCCEEEEECCCCEEECCCCEEEEEECCCCCCCCEEEEECCC GILISGDLIYDGPLIEDVYHSNARDYAASMRRLRELPARVVHGGHFPSFSGARLHAMIDD CEEEECCEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH WLRDHAL HHHHHCC >Mature Secondary Structure SRFSLPRGDAASWYRTTSLDDGITRIDEPAIKPFYRCNIWHVRGRERDLLVDFGLGAVP CCCCCCCCCCCCEEEECCCCCCHHHCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCC LRRQVPLLSERDLIAVASHTHFDHIGSAHEFDCCHVHAAEADILADPDNARTLADAFLDD HHHCCCCCCCCCEEEEECCCCHHHCCCCCCCCEEEEEECCCCEEECCCCHHHHHHHHHHH AMFDALPPAPFEHHRYRIAPPTRIATLEDGEIIDLGDRRFEVIHTPGHSPGGIALWEAAS HHHHCCCCCCCCCCEEEECCCCEEEEECCCCEEECCCCEEEEEECCCCCCCCEEEEECCC GILISGDLIYDGPLIEDVYHSNARDYAASMRRLRELPARVVHGGHFPSFSGARLHAMIDD CEEEECCEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH WLRDHAL HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA