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The map label for this gene is yfgC [H]

Identifier: 92114937

GI number: 92114937

Start: 3148161

End: 3149606

Strand: Direct

Name: yfgC [H]

Synonym: Csal_2820

Alternate gene names: 92114937

Gene position: 3148161-3149606 (Clockwise)

Preceding gene: 92114934

Following gene: 92114941

Centisome position: 85.16

GC content: 69.09

Gene sequence:

>1446_bases
ATGCCACGCCGCTGGAATCTGCTTCCCGTTCTTTGTCTCGCCCTGGCCGCGTGCGTGGTCACCCCCGTTGCCATGGCGCA
GGACGATTACGGGCTGCCCGAGCTCGGCGGGGCCAGCGCGAGCGTTTCCAGCGGCGAGGAGTATCGCCTCGGTCGCGCCT
GGCTGCGCCAGTTTCGTGCCCAGACCGACGAGTGGGAAGACCCCATCGCCCGTGACTACATTCATGGCCTGGTCGCCCGC
CTGCTGCCCTACACCGACGTTCACGACCCTGTCATCGTCACCCTGGTCGACAGTCGTCTCCTCAACGCCTTCGCCGTGCC
GGGCGGCGTGATGGGGGTCAACAGCGGCCTGTTCACCTTCGCCGACAGCGAAGACACTCTCGCTTCGGTCATCGCCCACG
AACTCGGCCATCTCTCGCAGCACCACTATGCACGGCGCATGCAGCGCGTGGAAGAAACCCAGTTGCCGACCATGGCGGCG
ATGCTGGCCGGCATGGTGCTGGCCGCCGGCGGCGCGGGCGACGCCGGCCTGGCCACCATGGTCGGGTCCCAGGCGGCCTT
CATCCAGGACCAGCTCGCCTACTCGCGCCGCTTCGAGCAGGAGGCCGACCGCATCGGCCTGGACGCCATGGCCGATGCCG
GCTTCGACCCGCAGGCCATGCCGGAAATGTTCCGCGCCATGCAGCACCTGGCCAGCCTGCAGGGCGGCAACCCGCCGGAG
TTTCTGCTCACCCACCCGGTGACCGAATCGCGCATCAGCGACACCCAGACGCGCGCCAACCAGCTGCCATCGCCCGCACC
GCATACCAGCAAGGTGTTCGCGATGATTCGCGGCCGCGCGCTGCTCTCGCTCCATCGCAGCGACCCTGAACAGGCCATGA
CCCGGCTGCGCCAGGACGATCCGCCCGAAGCGGCGGTCCGCTACCTGCAGGCCTTGATCGACGCCCAGCGCGGCAATACC
GCCAAGGCCCTCGCCACCCTCGACGCCCTGAGCGAGGCCCAGCCGGACCTTTCCATGCTGCCCGCCAGCGCCGCCGAGGT
CGCCCTCGACGCCGGACAGCGCGACGACGCCCTGCGTCGCGCCCGGCGCATTCTCCGCCTGCAGCCGGACTACTACCCGG
CACAGCGCATCGAGGCCGAGGTCCTGCTGCAGCAGGCGCCGGACCAGGCCTTCAATGTCCTGCGCGACATGAGCGATCAG
TACCCCGAGGACCCGCACGTCTTCGCCCTGCTCGCCGAAGCCGCCGGACGCAGCGGCCGCGACCTGTGGGGCATGCTCGC
GCGTGCCGAGCATTTGCAGCTCACCGGCCATATCGACCGCGCCATCAAGCAGATCGACATCGCCGAGCAGACCGCCCGCG
ACCGAGGCGACTTCGCCATGGCCAGCCGGCTCGGCGAACGTCGACAGGCGTATCTGGGATATCGACAGACGCTGCGCAAT
TTCTAG

Upstream 100 bases:

>100_bases
AAAGGCACTTTGCCAGACAGTTCAATGTCGAAGCCACGGTAGCACGGCGCGCGTCACGGCGTCGGCCTTCCCGCTTCGTC
ACGTCACCACGAGGATGCCC

Downstream 100 bases:

>100_bases
CGCCGGCAAGAAGAGAACGGCGACCCGCCACGCGGCGGCAAGGGAATCAGTGTCGGGGAATGCGTTCGTCGCGGGGGCTG
ATGCCGAAGTGGTTGCGATA

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 480

Protein sequence:

>481_residues
MPRRWNLLPVLCLALAACVVTPVAMAQDDYGLPELGGASASVSSGEEYRLGRAWLRQFRAQTDEWEDPIARDYIHGLVAR
LLPYTDVHDPVIVTLVDSRLLNAFAVPGGVMGVNSGLFTFADSEDTLASVIAHELGHLSQHHYARRMQRVEETQLPTMAA
MLAGMVLAAGGAGDAGLATMVGSQAAFIQDQLAYSRRFEQEADRIGLDAMADAGFDPQAMPEMFRAMQHLASLQGGNPPE
FLLTHPVTESRISDTQTRANQLPSPAPHTSKVFAMIRGRALLSLHRSDPEQAMTRLRQDDPPEAAVRYLQALIDAQRGNT
AKALATLDALSEAQPDLSMLPASAAEVALDAGQRDDALRRARRILRLQPDYYPAQRIEAEVLLQQAPDQAFNVLRDMSDQ
YPEDPHVFALLAEAAGRSGRDLWGMLARAEHLQLTGHIDRAIKQIDIAEQTARDRGDFAMASRLGERRQAYLGYRQTLRN
F

Sequences:

>Translated_481_residues
MPRRWNLLPVLCLALAACVVTPVAMAQDDYGLPELGGASASVSSGEEYRLGRAWLRQFRAQTDEWEDPIARDYIHGLVAR
LLPYTDVHDPVIVTLVDSRLLNAFAVPGGVMGVNSGLFTFADSEDTLASVIAHELGHLSQHHYARRMQRVEETQLPTMAA
MLAGMVLAAGGAGDAGLATMVGSQAAFIQDQLAYSRRFEQEADRIGLDAMADAGFDPQAMPEMFRAMQHLASLQGGNPPE
FLLTHPVTESRISDTQTRANQLPSPAPHTSKVFAMIRGRALLSLHRSDPEQAMTRLRQDDPPEAAVRYLQALIDAQRGNT
AKALATLDALSEAQPDLSMLPASAAEVALDAGQRDDALRRARRILRLQPDYYPAQRIEAEVLLQQAPDQAFNVLRDMSDQ
YPEDPHVFALLAEAAGRSGRDLWGMLARAEHLQLTGHIDRAIKQIDIAEQTARDRGDFAMASRLGERRQAYLGYRQTLRN
F
>Mature_480_residues
PRRWNLLPVLCLALAACVVTPVAMAQDDYGLPELGGASASVSSGEEYRLGRAWLRQFRAQTDEWEDPIARDYIHGLVARL
LPYTDVHDPVIVTLVDSRLLNAFAVPGGVMGVNSGLFTFADSEDTLASVIAHELGHLSQHHYARRMQRVEETQLPTMAAM
LAGMVLAAGGAGDAGLATMVGSQAAFIQDQLAYSRRFEQEADRIGLDAMADAGFDPQAMPEMFRAMQHLASLQGGNPPEF
LLTHPVTESRISDTQTRANQLPSPAPHTSKVFAMIRGRALLSLHRSDPEQAMTRLRQDDPPEAAVRYLQALIDAQRGNTA
KALATLDALSEAQPDLSMLPASAAEVALDAGQRDDALRRARRILRLQPDYYPAQRIEAEVLLQQAPDQAFNVLRDMSDQY
PEDPHVFALLAEAAGRSGRDLWGMLARAEHLQLTGHIDRAIKQIDIAEQTARDRGDFAMASRLGERRQAYLGYRQTLRNF

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=448, Percent_Identity=32.3660714285714, Blast_Score=186, Evalue=4e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 52921; Mature: 52789

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50293 TPR_REGION ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRRWNLLPVLCLALAACVVTPVAMAQDDYGLPELGGASASVSSGEEYRLGRAWLRQFRA
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
QTDEWEDPIARDYIHGLVARLLPYTDVHDPVIVTLVDSRLLNAFAVPGGVMGVNSGLFTF
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCCCCEECCCCCEEE
ADSEDTLASVIAHELGHLSQHHYARRMQRVEETQLPTMAAMLAGMVLAAGGAGDAGLATM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHH
VGSQAAFIQDQLAYSRRFEQEADRIGLDAMADAGFDPQAMPEMFRAMQHLASLQGGNPPE
HCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
FLLTHPVTESRISDTQTRANQLPSPAPHTSKVFAMIRGRALLSLHRSDPEQAMTRLRQDD
EEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
PPEAAVRYLQALIDAQRGNTAKALATLDALSEAQPDLSMLPASAAEVALDAGQRDDALRR
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHCCCCCHHHHHH
ARRILRLQPDYYPAQRIEAEVLLQQAPDQAFNVLRDMSDQYPEDPHVFALLAEAAGRSGR
HHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCH
DLWGMLARAEHLQLTGHIDRAIKQIDIAEQTARDRGDFAMASRLGERRQAYLGYRQTLRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
F
C
>Mature Secondary Structure 
PRRWNLLPVLCLALAACVVTPVAMAQDDYGLPELGGASASVSSGEEYRLGRAWLRQFRA
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
QTDEWEDPIARDYIHGLVARLLPYTDVHDPVIVTLVDSRLLNAFAVPGGVMGVNSGLFTF
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCCCCEECCCCCEEE
ADSEDTLASVIAHELGHLSQHHYARRMQRVEETQLPTMAAMLAGMVLAAGGAGDAGLATM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHH
VGSQAAFIQDQLAYSRRFEQEADRIGLDAMADAGFDPQAMPEMFRAMQHLASLQGGNPPE
HCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
FLLTHPVTESRISDTQTRANQLPSPAPHTSKVFAMIRGRALLSLHRSDPEQAMTRLRQDD
EEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
PPEAAVRYLQALIDAQRGNTAKALATLDALSEAQPDLSMLPASAAEVALDAGQRDDALRR
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHCCCCCHHHHHH
ARRILRLQPDYYPAQRIEAEVLLQQAPDQAFNVLRDMSDQYPEDPHVFALLAEAAGRSGR
HHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCH
DLWGMLARAEHLQLTGHIDRAIKQIDIAEQTARDRGDFAMASRLGERRQAYLGYRQTLRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]