| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is 92114872
Identifier: 92114872
GI number: 92114872
Start: 3085429
End: 3086019
Strand: Direct
Name: 92114872
Synonym: Csal_2754
Alternate gene names: NA
Gene position: 3085429-3086019 (Clockwise)
Preceding gene: 92114871
Following gene: 92114873
Centisome position: 83.47
GC content: 68.02
Gene sequence:
>591_bases ATGCCACGCCGCCTGATCGCCTGTGCCTGCCTGGTGCTCGCCAGCGTTTCGCTGAGCGCCCATGCCTTCGATCGCCAGGC CCTCCAAGCTCAGCTCGAACGCACCACCGCGATCGAGGGACGTTTCACCCAGACCCGCTTTCTCGCCGATGTCGACACCG AGTTGCAAAGCCGGGGCCGCTTCGCCTACGTACGCGACCAGAAGGTCGTCTGGCAACTGGAAACCCCGGTCGAGGATACG CTGGTGCTGACCCCGGCCAACGCCGAGGATGCCACGCCAGGCGAGGGCGCCGGTGACGCCGGTCGCGAGCAGGTCGCCGC CTTGTTGCTCCGCCTGCTCGGCGGTGACTGGTCGGCCCTGGAAGAACGCTTCACGCAGACGCTCGACGGCACCCGTGACG CATGGCGCGTACAACTCACGCCACGCGACGCCGAGCTTGCCGCGCGCATTGCCGAGATCCGCCTCGCCGGTGGTCGTCAT GTCGAGCGTCTGGTGATGGAAACCGCCGACGGCGATCGCTTGCGCATCGAGTTGAGCGATCAGGCGCCGATGTCCCCCGA GGCCATCGACGCGCTGCCCGACGCACGCTGA
Upstream 100 bases:
>100_bases TTCAACTTCTTTCCCTTCTGGAGTTCCCGCGAGAAAGGTGACCGCCATGATGCCTGAGCCACACCCGAGCCACTCGATAC CGCCAGCCGGGAGATATCGC
Downstream 100 bases:
>100_bases CCGGCCCCAGGATCGCCCATGCCATCTCAGTCCACCGCCAACCGCCTCCCCCGCCATCTCGCCTGGGCCTGGCTGGTCGT TCACATCCTGTGCCTGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide Protein; Outer Membrane Protein; Outer Membrane Lipocarrier Protein LolA Family Protein; Exported Lipoprotein; Secreted Protein
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MPRRLIACACLVLASVSLSAHAFDRQALQAQLERTTAIEGRFTQTRFLADVDTELQSRGRFAYVRDQKVVWQLETPVEDT LVLTPANAEDATPGEGAGDAGREQVAALLLRLLGGDWSALEERFTQTLDGTRDAWRVQLTPRDAELAARIAEIRLAGGRH VERLVMETADGDRLRIELSDQAPMSPEAIDALPDAR
Sequences:
>Translated_196_residues MPRRLIACACLVLASVSLSAHAFDRQALQAQLERTTAIEGRFTQTRFLADVDTELQSRGRFAYVRDQKVVWQLETPVEDT LVLTPANAEDATPGEGAGDAGREQVAALLLRLLGGDWSALEERFTQTLDGTRDAWRVQLTPRDAELAARIAEIRLAGGRH VERLVMETADGDRLRIELSDQAPMSPEAIDALPDAR >Mature_195_residues PRRLIACACLVLASVSLSAHAFDRQALQAQLERTTAIEGRFTQTRFLADVDTELQSRGRFAYVRDQKVVWQLETPVEDTL VLTPANAEDATPGEGAGDAGREQVAALLLRLLGGDWSALEERFTQTLDGTRDAWRVQLTPRDAELAARIAEIRLAGGRHV ERLVMETADGDRLRIELSDQAPMSPEAIDALPDAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21591; Mature: 21459
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRRLIACACLVLASVSLSAHAFDRQALQAQLERTTAIEGRFTQTRFLADVDTELQSRGR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC FAYVRDQKVVWQLETPVEDTLVLTPANAEDATPGEGAGDAGREQVAALLLRLLGGDWSAL EEEEECCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHH EERFTQTLDGTRDAWRVQLTPRDAELAARIAEIRLAGGRHVERLVMETADGDRLRIELSD HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEECC QAPMSPEAIDALPDAR CCCCCCHHHHCCCCCC >Mature Secondary Structure PRRLIACACLVLASVSLSAHAFDRQALQAQLERTTAIEGRFTQTRFLADVDTELQSRGR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC FAYVRDQKVVWQLETPVEDTLVLTPANAEDATPGEGAGDAGREQVAALLLRLLGGDWSAL EEEEECCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHH EERFTQTLDGTRDAWRVQLTPRDAELAARIAEIRLAGGRHVERLVMETADGDRLRIELSD HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEECC QAPMSPEAIDALPDAR CCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA