| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
Click here to switch to the map view.
The map label for this gene is 92114866
Identifier: 92114866
GI number: 92114866
Start: 3080188
End: 3080901
Strand: Direct
Name: 92114866
Synonym: Csal_2748
Alternate gene names: NA
Gene position: 3080188-3080901 (Clockwise)
Preceding gene: 92114865
Following gene: 92114867
Centisome position: 83.32
GC content: 68.63
Gene sequence:
>714_bases ATGACGACACCGGCCATGATGTACGTGCATGACTGGCGCGCCTGGCAGCCCGGCCGCCGCGATACCGCACACTCACGCCT CAGCGTTGAGGAAAAGCCTGCCGGCGCCCAGGTACCGGCGATGCTGCGTCGCCGACTGACGAGCATCGGTCGCGCGCTTT GCGACATGCTCGCCGAACTCGATGCCGAGGCCGACTACCCGCTCTTGTATGCCTCACGGCACGGCGATGGCGAGCGCACC CTGGCGATGCTCGAAGCGCTCGCCGACGAAGCCCCCCTGTCGCCGGCCCGCTTCGGCCTGTCGGTGCACAACGCCATCCC CGGCGTCTACTCGATCGGGCGCGGTAACCGCCGCACCCAGCAGGCGATCGCCGCGTCGGGCGACGAGTTCGCCGCCTTGC TCAGTGAAGCCCAGGGCTATCTTCACCAGGGTGAGCCATCGGTCATCGTCGCCTTTGCCGAGCAGCCGATTCCCGCTCGT TTCACCGCGCATTTCACGACACCGGTGGCGGCTGCCGCCGTCGCGTTACGCCTCTCGCTGACACCGTCCGACACCGCCTG GTCACTGCATCAGCGTGCTCTGGCGCACGCCGGCACGGCGAACGACGCTGACGCCCCCCAGCCCAGCGATCTGATCGACT GGCTGTGCGGCTTGCGCGACGAGCTGCCCTGCCATCGTCAACGCCTGGCCTGGCGACTGGAGCGCACCGGATAG
Upstream 100 bases:
>100_bases CATCAATCGGCGACTCGCGTAGGGTAAGCGTCTGTATACGTTGCCATTCAATTTGTGGATCGAGCCAGCGGCATTCGCCG ACGAAAGGGAAGACGTCTGC
Downstream 100 bases:
>100_bases ACGATGACGATCCCGATACCGATGCGATATCGCCCCCTGCCGATCGCACGTCCCGCGGGGACGCTGTGAGCCGAAAGCGG TAACATGTACGAACACCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MTTPAMMYVHDWRAWQPGRRDTAHSRLSVEEKPAGAQVPAMLRRRLTSIGRALCDMLAELDAEADYPLLYASRHGDGERT LAMLEALADEAPLSPARFGLSVHNAIPGVYSIGRGNRRTQQAIAASGDEFAALLSEAQGYLHQGEPSVIVAFAEQPIPAR FTAHFTTPVAAAAVALRLSLTPSDTAWSLHQRALAHAGTANDADAPQPSDLIDWLCGLRDELPCHRQRLAWRLERTG
Sequences:
>Translated_237_residues MTTPAMMYVHDWRAWQPGRRDTAHSRLSVEEKPAGAQVPAMLRRRLTSIGRALCDMLAELDAEADYPLLYASRHGDGERT LAMLEALADEAPLSPARFGLSVHNAIPGVYSIGRGNRRTQQAIAASGDEFAALLSEAQGYLHQGEPSVIVAFAEQPIPAR FTAHFTTPVAAAAVALRLSLTPSDTAWSLHQRALAHAGTANDADAPQPSDLIDWLCGLRDELPCHRQRLAWRLERTG >Mature_236_residues TTPAMMYVHDWRAWQPGRRDTAHSRLSVEEKPAGAQVPAMLRRRLTSIGRALCDMLAELDAEADYPLLYASRHGDGERTL AMLEALADEAPLSPARFGLSVHNAIPGVYSIGRGNRRTQQAIAASGDEFAALLSEAQGYLHQGEPSVIVAFAEQPIPARF TAHFTTPVAAAAVALRLSLTPSDTAWSLHQRALAHAGTANDADAPQPSDLIDWLCGLRDELPCHRQRLAWRLERTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25835; Mature: 25704
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPAMMYVHDWRAWQPGRRDTAHSRLSVEEKPAGAQVPAMLRRRLTSIGRALCDMLAEL CCCCEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH DAEADYPLLYASRHGDGERTLAMLEALADEAPLSPARFGLSVHNAIPGVYSIGRGNRRTQ CCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHCCCHHHHCCCHHCCCCCCHHHH QAIAASGDEFAALLSEAQGYLHQGEPSVIVAFAEQPIPARFTAHFTTPVAAAAVALRLSL HHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEHHCCHHHHHHHHHHEEC TPSDTAWSLHQRALAHAGTANDADAPQPSDLIDWLCGLRDELPCHRQRLAWRLERTG CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure TTPAMMYVHDWRAWQPGRRDTAHSRLSVEEKPAGAQVPAMLRRRLTSIGRALCDMLAEL CCCEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH DAEADYPLLYASRHGDGERTLAMLEALADEAPLSPARFGLSVHNAIPGVYSIGRGNRRTQ CCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHCCCHHHHCCCHHCCCCCCHHHH QAIAASGDEFAALLSEAQGYLHQGEPSVIVAFAEQPIPARFTAHFTTPVAAAAVALRLSL HHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEHHCCHHHHHHHHHHEEC TPSDTAWSLHQRALAHAGTANDADAPQPSDLIDWLCGLRDELPCHRQRLAWRLERTG CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA