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The map label for this gene is ydeP [H]

Identifier: 92114809

GI number: 92114809

Start: 3014539

End: 3016890

Strand: Direct

Name: ydeP [H]

Synonym: Csal_2691

Alternate gene names: 92114809

Gene position: 3014539-3016890 (Clockwise)

Preceding gene: 92114808

Following gene: 92114810

Centisome position: 81.55

GC content: 62.37

Gene sequence:

>2352_bases
ATGGCACACCCACTCAAGGACGACGAACTGCACGGCAAGCAGGGCAAATACGATGCACCTGGCGGCGGCTGGCAGTCGAT
CCGGGCCACCGAGACGCATTTCCTGCGCGAGAAAGTGCCCTTCAAGGGCAACGCCTTGATGCTCAAGATCAATCAACCCA
AGGGCGGGTTCGAGTGTCCGAGTTGCGCATGGCCCAATCCGGGAAAGCCCGGCCCGGCTGAATTCTGCGAGAACGGTGCC
AAGGCAGTGGCGTGGGAAGCTACGGCGGCACGCACCACGCCGGAGTTCTTCGCCAGCCACACGCTAACGGAACTTCTCGA
CTGGTCAGATCACGCTCTCGAGAAACAAGGCCGGTTGACGCATCCCATGCGCTACAACGCCACTACAGACAAATATGATC
CCATCGACTGGGACACCGCCTATCGCGAGATCGGCGAGCGCGTCGCTTCCTTTGATCCGACGCGCGTCGAACTCTACACC
TCGGGACGCACCTCCAATGAGGCCGCCTTTCTATGGCAGCTCTACGGCCGCATGCTTGGCACGCACAATTTTCCCGATTG
TTCCAACATGTGCCACGAGACCACCACCGTGGCGCTTCCGCAGAGCATCGGCGTGGGCAAGGCGACCACCACACTGGAGG
ATTTCGAACACGCCGACTGCATCTTCCTGTTCGGCCAGAACGCCGGCACCAATAGTCCGCGGATGATGGGCCTGCTTCAC
GAGGCGCGTCTGCGTGGCGCCGAGGTGGTCACCTTCAATCCGCTGCGCGAGCGGGCACTGGTCAAGTTCGCCAACCCGCA
GACGCCCAAGGACATGCTCACCAACCAAGGCGTGCCGATCAGCTCGCAGTATCATCAGGTTCGCATCGGGGGGGATATCG
CCGCGATCCAAGGCATCTGCAAGCGGATCCTCGAAGTCGACGACGAGGCCCGCGACAACGGCGGCGAGCGCGTCATCGAT
CATGACTTCATCGCGATGCACACCGATGGCTTCGACGCCTTCGCCGCTCATTGCCGCAACCTGCCGTGGGAACGTATCGA
GCGTCACAGCGGTCTCGAACGGGCGGCGATCGAACAAGCCGCCGGGGCCTGGATGAAAGCCGAGCGCGTCATATGCTGCT
GGGGAATGGGCATCACCCAGCATATGCGTGGCGGCGACAATATCCATCAGATTCTCAACCTGCTGCTGATGGGCGGCCAT
ATCGGCCGCCGCGGCGCCGGCGCCTGCCCGGTGCGAGGCCACTCCAACGTCCAGGGCGACCGCACCGTGGGGATCTTTCA
CAAATCCGGCGAGGCGTTCCTGTCGAAGATGGACGAGAGCTTCGGCATCGATTGCCGTCGCGAACACGGCCACGACGTGG
CCCTATGCTGCGAGGCCATCTTGCGCGACGAGGTGGACGCCTTCCTCGGCATGGGCGGTAACTTCTTCCGCGCCATCGCC
GATCAGGCTCGGGTCTGCGCCCATGTCGAGAAGATCCCGCTGACCGTGCAGATCGCCACCAAGCTCAACCGCAGCCACCT
GATCCACGGCAAGGCGGCCTACCTGCTGCCGGCGCTGGCCCGCACCGAGAAGGACGTCCAGGCCGGCGTCGAGCAGACCA
TCACCATCGAGGACGGCATGTGCAACGTGCAGGGCTCCAAGGGCGCGCTGGAGCCGGCGTCAGAGCATCTGCGCTCCGAA
ATCGCCATCGTTGCCGGCCTCGGCAAGGCGACGTTCGCCCCCAACCCCAAGGTCGACTGGGAATGGCTAGTCGAGGATTA
CGCACGCATCCGCGACAAGATCGAAGCAACCCAGCCGGAAACTTTCTACGACTTCAATGCCCGGCTCGCCGCGACCGGCG
TGTTCCATCTCGATATCGCCGCCCGCGATCGAATCTGGAACACCAATTCTGGCAAGGCGCACTTTCTGTTCCCTGAAGGG
CACTTGACCGAGGACGAGTCCGCACCCGATGACATGCATTTTCAGTTGCTCTCGATCCGCGGCCACGACCAGTACAACAC
CACCGTGTATTCATACGACGATCGCTACCGGGACATCTACGGCACCCGCATGGTACTGATGATGAACCCTGCCGACATCG
AGAAGCACGGTTTCGAGGCCGGCAACAAGGTCACGCTGACAGCGGTAAGCGACGATGGAATCGAACGTCGGGTCTCGGGC
TTCAAGATCATCGCCTATGACCTGCCGCGGAACTGCCTCGGTGCCTACTACCCCGAGGTCAACGACCTCATTCCCGTCGG
CAACCGAGACGAGCAGAGCAACACTATCGCCGGCAAGTCGATCCCGGTGACGCTCGCGTTGATGAGCACAGCGGAGGTGG
AAGCGGAAACCGGACTGCTTGCCACGAGTTGA

Upstream 100 bases:

>100_bases
TTCCTTGCCATACTCATCATCGCGCATTCACTAGCCACCATACGATAAGCCCGCGACACATCTAGTGGAGCGCGGGCGCA
ATACCCAAGAGGCGACGGTC

Downstream 100 bases:

>100_bases
AGACGGCCCTACCCGCATGCGCGAGTGGCATGTCACTCGCGCATGCGGCATGAGCTTCCTCATCACCTTAATTTAAAAAC
ACCATACGACTCGCGCACTT

Product: oxidoreductase alpha (molybdopterin) subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 783; Mature: 782

Protein sequence:

>783_residues
MAHPLKDDELHGKQGKYDAPGGGWQSIRATETHFLREKVPFKGNALMLKINQPKGGFECPSCAWPNPGKPGPAEFCENGA
KAVAWEATAARTTPEFFASHTLTELLDWSDHALEKQGRLTHPMRYNATTDKYDPIDWDTAYREIGERVASFDPTRVELYT
SGRTSNEAAFLWQLYGRMLGTHNFPDCSNMCHETTTVALPQSIGVGKATTTLEDFEHADCIFLFGQNAGTNSPRMMGLLH
EARLRGAEVVTFNPLRERALVKFANPQTPKDMLTNQGVPISSQYHQVRIGGDIAAIQGICKRILEVDDEARDNGGERVID
HDFIAMHTDGFDAFAAHCRNLPWERIERHSGLERAAIEQAAGAWMKAERVICCWGMGITQHMRGGDNIHQILNLLLMGGH
IGRRGAGACPVRGHSNVQGDRTVGIFHKSGEAFLSKMDESFGIDCRREHGHDVALCCEAILRDEVDAFLGMGGNFFRAIA
DQARVCAHVEKIPLTVQIATKLNRSHLIHGKAAYLLPALARTEKDVQAGVEQTITIEDGMCNVQGSKGALEPASEHLRSE
IAIVAGLGKATFAPNPKVDWEWLVEDYARIRDKIEATQPETFYDFNARLAATGVFHLDIAARDRIWNTNSGKAHFLFPEG
HLTEDESAPDDMHFQLLSIRGHDQYNTTVYSYDDRYRDIYGTRMVLMMNPADIEKHGFEAGNKVTLTAVSDDGIERRVSG
FKIIAYDLPRNCLGAYYPEVNDLIPVGNRDEQSNTIAGKSIPVTLALMSTAEVEAETGLLATS

Sequences:

>Translated_783_residues
MAHPLKDDELHGKQGKYDAPGGGWQSIRATETHFLREKVPFKGNALMLKINQPKGGFECPSCAWPNPGKPGPAEFCENGA
KAVAWEATAARTTPEFFASHTLTELLDWSDHALEKQGRLTHPMRYNATTDKYDPIDWDTAYREIGERVASFDPTRVELYT
SGRTSNEAAFLWQLYGRMLGTHNFPDCSNMCHETTTVALPQSIGVGKATTTLEDFEHADCIFLFGQNAGTNSPRMMGLLH
EARLRGAEVVTFNPLRERALVKFANPQTPKDMLTNQGVPISSQYHQVRIGGDIAAIQGICKRILEVDDEARDNGGERVID
HDFIAMHTDGFDAFAAHCRNLPWERIERHSGLERAAIEQAAGAWMKAERVICCWGMGITQHMRGGDNIHQILNLLLMGGH
IGRRGAGACPVRGHSNVQGDRTVGIFHKSGEAFLSKMDESFGIDCRREHGHDVALCCEAILRDEVDAFLGMGGNFFRAIA
DQARVCAHVEKIPLTVQIATKLNRSHLIHGKAAYLLPALARTEKDVQAGVEQTITIEDGMCNVQGSKGALEPASEHLRSE
IAIVAGLGKATFAPNPKVDWEWLVEDYARIRDKIEATQPETFYDFNARLAATGVFHLDIAARDRIWNTNSGKAHFLFPEG
HLTEDESAPDDMHFQLLSIRGHDQYNTTVYSYDDRYRDIYGTRMVLMMNPADIEKHGFEAGNKVTLTAVSDDGIERRVSG
FKIIAYDLPRNCLGAYYPEVNDLIPVGNRDEQSNTIAGKSIPVTLALMSTAEVEAETGLLATS
>Mature_782_residues
AHPLKDDELHGKQGKYDAPGGGWQSIRATETHFLREKVPFKGNALMLKINQPKGGFECPSCAWPNPGKPGPAEFCENGAK
AVAWEATAARTTPEFFASHTLTELLDWSDHALEKQGRLTHPMRYNATTDKYDPIDWDTAYREIGERVASFDPTRVELYTS
GRTSNEAAFLWQLYGRMLGTHNFPDCSNMCHETTTVALPQSIGVGKATTTLEDFEHADCIFLFGQNAGTNSPRMMGLLHE
ARLRGAEVVTFNPLRERALVKFANPQTPKDMLTNQGVPISSQYHQVRIGGDIAAIQGICKRILEVDDEARDNGGERVIDH
DFIAMHTDGFDAFAAHCRNLPWERIERHSGLERAAIEQAAGAWMKAERVICCWGMGITQHMRGGDNIHQILNLLLMGGHI
GRRGAGACPVRGHSNVQGDRTVGIFHKSGEAFLSKMDESFGIDCRREHGHDVALCCEAILRDEVDAFLGMGGNFFRAIAD
QARVCAHVEKIPLTVQIATKLNRSHLIHGKAAYLLPALARTEKDVQAGVEQTITIEDGMCNVQGSKGALEPASEHLRSEI
AIVAGLGKATFAPNPKVDWEWLVEDYARIRDKIEATQPETFYDFNARLAATGVFHLDIAARDRIWNTNSGKAHFLFPEGH
LTEDESAPDDMHFQLLSIRGHDQYNTTVYSYDDRYRDIYGTRMVLMMNPADIEKHGFEAGNKVTLTAVSDDGIERRVSGF
KIIAYDLPRNCLGAYYPEVNDLIPVGNRDEQSNTIAGKSIPVTLALMSTAEVEAETGLLATS

Specific function: Probably involved in acid resistance [H]

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787778, Length=760, Percent_Identity=45.1315789473684, Blast_Score=674, Evalue=0.0,
Organism=Escherichia coli, GI3868721, Length=394, Percent_Identity=24.3654822335025, Blast_Score=132, Evalue=7e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR010046 [H]

Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: NA

Molecular weight: Translated: 86688; Mature: 86556

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHPLKDDELHGKQGKYDAPGGGWQSIRATETHFLREKVPFKGNALMLKINQPKGGFECP
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC
SCAWPNPGKPGPAEFCENGAKAVAWEATAARTTPEFFASHTLTELLDWSDHALEKQGRLT
CCCCCCCCCCCHHHHHCCCCCEEEEECHHCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCC
HPMRYNATTDKYDPIDWDTAYREIGERVASFDPTRVELYTSGRTSNEAAFLWQLYGRMLG
CCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHC
THNFPDCSNMCHETTTVALPQSIGVGKATTTLEDFEHADCIFLFGQNAGTNSPRMMGLLH
CCCCCCHHHHHHCCCEEECCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHH
EARLRGAEVVTFNPLRERALVKFANPQTPKDMLTNQGVPISSQYHQVRIGGDIAAIQGIC
HHHCCCCEEEEECHHHHHHHEEECCCCCCHHHHHCCCCCCCCCCEEEEECCCHHHHHHHH
KRILEVDDEARDNGGERVIDHDFIAMHTDGFDAFAAHCRNLPWERIERHSGLERAAIEQA
HHHHHCCCHHCCCCCCEEECCCEEEEECCCHHHHHHHHCCCCHHHHHHHCCHHHHHHHHH
AGAWMKAERVICCWGMGITQHMRGGDNIHQILNLLLMGGHIGRRGAGACPVRGHSNVQGD
HCCHHHHCEEEEEECCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
RTVGIFHKSGEAFLSKMDESFGIDCRREHGHDVALCCEAILRDEVDAFLGMGGNFFRAIA
CEEEEEECCCHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
DQARVCAHVEKIPLTVQIATKLNRSHLIHGKAAYLLPALARTEKDVQAGVEQTITIEDGM
HHHHHHHHHHHCCEEEEEECCCCCHHEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCE
CNVQGSKGALEPASEHLRSEIAIVAGLGKATFAPNPKVDWEWLVEDYARIRDKIEATQPE
EEECCCCCCCCHHHHHHHHCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
TFYDFNARLAATGVFHLDIAARDRIWNTNSGKAHFLFPEGHLTEDESAPDDMHFQLLSIR
EEEECCCEEEEEEEEEEEEECCCCEECCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEE
GHDQYNTTVYSYDDRYRDIYGTRMVLMMNPADIEKHGFEAGNKVTLTAVSDDGIERRVSG
CCCCCCCEEEECCCHHHHHCCCEEEEEECCCCHHHHCCCCCCEEEEEEECCCCHHHHHCC
FKIIAYDLPRNCLGAYYPEVNDLIPVGNRDEQSNTIAGKSIPVTLALMSTAEVEAETGLL
EEEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHCCCE
ATS
ECC
>Mature Secondary Structure 
AHPLKDDELHGKQGKYDAPGGGWQSIRATETHFLREKVPFKGNALMLKINQPKGGFECP
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC
SCAWPNPGKPGPAEFCENGAKAVAWEATAARTTPEFFASHTLTELLDWSDHALEKQGRLT
CCCCCCCCCCCHHHHHCCCCCEEEEECHHCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCC
HPMRYNATTDKYDPIDWDTAYREIGERVASFDPTRVELYTSGRTSNEAAFLWQLYGRMLG
CCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHC
THNFPDCSNMCHETTTVALPQSIGVGKATTTLEDFEHADCIFLFGQNAGTNSPRMMGLLH
CCCCCCHHHHHHCCCEEECCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHH
EARLRGAEVVTFNPLRERALVKFANPQTPKDMLTNQGVPISSQYHQVRIGGDIAAIQGIC
HHHCCCCEEEEECHHHHHHHEEECCCCCCHHHHHCCCCCCCCCCEEEEECCCHHHHHHHH
KRILEVDDEARDNGGERVIDHDFIAMHTDGFDAFAAHCRNLPWERIERHSGLERAAIEQA
HHHHHCCCHHCCCCCCEEECCCEEEEECCCHHHHHHHHCCCCHHHHHHHCCHHHHHHHHH
AGAWMKAERVICCWGMGITQHMRGGDNIHQILNLLLMGGHIGRRGAGACPVRGHSNVQGD
HCCHHHHCEEEEEECCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
RTVGIFHKSGEAFLSKMDESFGIDCRREHGHDVALCCEAILRDEVDAFLGMGGNFFRAIA
CEEEEEECCCHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
DQARVCAHVEKIPLTVQIATKLNRSHLIHGKAAYLLPALARTEKDVQAGVEQTITIEDGM
HHHHHHHHHHHCCEEEEEECCCCCHHEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCE
CNVQGSKGALEPASEHLRSEIAIVAGLGKATFAPNPKVDWEWLVEDYARIRDKIEATQPE
EEECCCCCCCCHHHHHHHHCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
TFYDFNARLAATGVFHLDIAARDRIWNTNSGKAHFLFPEGHLTEDESAPDDMHFQLLSIR
EEEECCCEEEEEEEEEEEEECCCCEECCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEE
GHDQYNTTVYSYDDRYRDIYGTRMVLMMNPADIEKHGFEAGNKVTLTAVSDDGIERRVSG
CCCCCCCEEEECCCHHHHHCCCEEEEEECCCCHHHHCCCCCCEEEEEEECCCCHHHHHCC
FKIIAYDLPRNCLGAYYPEVNDLIPVGNRDEQSNTIAGKSIPVTLALMSTAEVEAETGLL
EEEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHCCCE
ATS
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]