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The map label for this gene is 92114742

Identifier: 92114742

GI number: 92114742

Start: 2936857

End: 2937291

Strand: Direct

Name: 92114742

Synonym: Csal_2624

Alternate gene names: NA

Gene position: 2936857-2937291 (Clockwise)

Preceding gene: 92114741

Following gene: 92114743

Centisome position: 79.45

GC content: 61.15

Gene sequence:

>435_bases
ATGAAACGACCTCCCATGATTAGCCCGGCGCTGCTGGAACGTATTGTCAACGCCTCGGACGATGGCATCGTGGTGGCCGA
ACAGGAAGGCGACGAAACCATCCTGATCTACGCCAATCAGGGCTTCGAAAGACTCACCGGCTACAGCGTCGACGAGATCC
TTTACCGTGACTGCCGTTTCCTGCAGGGCGACGATCGCGACCAGCCGCAACTGGACGAGATCCGCCGGTCGATTCGCCAG
GGCGAGCCCTGCCGGGAGGTGCTGCGCAACTACCGCAAGGACGGCTCGATGTTCTGGAACGAACTTTCCATCACGCCTGT
CTACGATGACGAGGATCAGTTGACCTACTTCGTCGGCGTACAGAAAGACGTGACCGAGCTGGTCGAGGCCATGCACGAGC
TGGAGCGGCTACGGGGGGAGCGCGACGCGCCCTGA

Upstream 100 bases:

>100_bases
ATGAAGGCAAATCCGCCACGGTGCTGCCCTGGTGATACGCTGCCCCGGCGATGTACCGCCATGGCAGCCGACAATGACAG
GTAAAGGAACGCGAGAGACG

Downstream 100 bases:

>100_bases
CTCCCGCACGAGGCGGCCGGTTTTGCGTGTCGAGACTTGTACTCACGACGGGGAAACGCTATATAGCCTCCGGGCATCAC
TGGGATGCCGTTTCACGGGA

Product: putative PAS/PAC sensor protein

Products: NA

Alternate protein names: Phototropin homolog [H]

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MKRPPMISPALLERIVNASDDGIVVAEQEGDETILIYANQGFERLTGYSVDEILYRDCRFLQGDDRDQPQLDEIRRSIRQ
GEPCREVLRNYRKDGSMFWNELSITPVYDDEDQLTYFVGVQKDVTELVEAMHELERLRGERDAP

Sequences:

>Translated_144_residues
MKRPPMISPALLERIVNASDDGIVVAEQEGDETILIYANQGFERLTGYSVDEILYRDCRFLQGDDRDQPQLDEIRRSIRQ
GEPCREVLRNYRKDGSMFWNELSITPVYDDEDQLTYFVGVQKDVTELVEAMHELERLRGERDAP
>Mature_144_residues
MKRPPMISPALLERIVNASDDGIVVAEQEGDETILIYANQGFERLTGYSVDEILYRDCRFLQGDDRDQPQLDEIRRSIRQ
GEPCREVLRNYRKDGSMFWNELSITPVYDDEDQLTYFVGVQKDVTELVEAMHELERLRGERDAP

Specific function: Exhibits the same spectroscopical features and blue- light induced photochemistry as plants phototropins, with the reversible formation of a blue-shifted photoproduct, assigned to an FMN-cysteine thiol adduct. Positive regulator in the activation of the g

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI6912446, Length=94, Percent_Identity=31.9148936170213, Blast_Score=63, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR002645 [H]

Pfam domain/function: PF00989 PAS; PF01740 STAS [H]

EC number: NA

Molecular weight: Translated: 16770; Mature: 16770

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: PS50112 PAS ; PS50113 PAC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRPPMISPALLERIVNASDDGIVVAEQEGDETILIYANQGFERLTGYSVDEILYRDCRF
CCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCHHHHCCCCHHHHHHHHHHH
LQGDDRDQPQLDEIRRSIRQGEPCREVLRNYRKDGSMFWNELSITPVYDDEDQLTYFVGV
CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCEEEEEEC
QKDVTELVEAMHELERLRGERDAP
CHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKRPPMISPALLERIVNASDDGIVVAEQEGDETILIYANQGFERLTGYSVDEILYRDCRF
CCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCHHHHCCCCHHHHHHHHHHH
LQGDDRDQPQLDEIRRSIRQGEPCREVLRNYRKDGSMFWNELSITPVYDDEDQLTYFVGV
CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCEEEEEEC
QKDVTELVEAMHELERLRGERDAP
CHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]