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The map label for this gene is ydjJ [C]

Identifier: 92114727

GI number: 92114727

Start: 2919472

End: 2920518

Strand: Direct

Name: ydjJ [C]

Synonym: Csal_2609

Alternate gene names: 92114727

Gene position: 2919472-2920518 (Clockwise)

Preceding gene: 92114726

Following gene: 92114728

Centisome position: 78.98

GC content: 66.19

Gene sequence:

>1047_bases
ATGAAAGCCAAAGCCCTGGTGCTGGAAAAGCAACGCGAGCTGTCATTACGTGACATTGATCTGCCGGATCAGCTAGGGCC
GGACGACGTGCGCATCCGCATACACACCGTGGGCATATGCGGCAGCGACGTGCACTACTATACCCATGGCCGGATCGGTC
CCTTCGTGGTGCGAGAGCCCATGGTGCTCGGCCATGAAGCGTCCGGCGTGATCACCGAAGTCGGCAGCCATGTCAGCCAC
CTCAAGGTAGGCGAGCGGGTGTGCATGGAACCCGGGATTCCCGACCCCACCTCGCGCGCCGCCAAGTTGGGCGTCTACAA
CGTCGATCCCGGCGTGCGCTTCTGGGCCACCCCACCGGTGCACGGCTGCCTGACCCCCGAAGTCATCCACCCGGCAGCCT
TCACCTTCGCCCTGCCCGATTCGGTCTCCTTCGCCGAGGGGGCGATGATCGAGCCGTTCGCCATCGGCATGCAGGCGGTG
GTCAAGGCGCGCATGCAGCCGGGCGATGTCTGCGTCGTCACCGGCGCCGGACCGATCGGTCTGATGGTCGCCCTGGCAGC
CCTGGCGGGAGGGGCCAGCGAAGTGCTGGTCTCCGATCTGGTCGAGGAGAAGCTGGCGATCGCCGGGCGCTACGCCGGCA
TCACCCCGGTCAATGTCTCGCGGGAATCCCTGCGGGCAGCCGTCGACCGGCGCTGCGGCGAGGACTGGGGCGCCGACGTG
GTGTTCGAGGCCAGCGGCAGCCCCCGGGTCTACGACGATGTGCTGGCCTGCACGCGTCCCGCCGGCGCGATCGTGCTGGT
GGGCATGCCCGTCGAGCCGGTCACTTTCGACATCGTCTCGGCACAGGCCAAGGAGTTACGCATCGAGACCGTCTTCCGCT
ACGCCAACGTCTACGATCGGGCGATCGATCTGATCGCTGCGGGCAAGGTCGATCTCAAGCCGCTGATCAGCGAGACCTTC
GACTTCGACGAGAGCATCACTGCGTTCGAGCGTGCCGCGAGCGCACGACCCCATGACGTCAAGCTGCAGATCACGCTTGA
CGCCTGA

Upstream 100 bases:

>100_bases
TCCAGCGTGACGCGTAGCTTCATTGCCAAGCCCCTGGCGAGTCGGGCCCATCGCTTCGAAGCCCCCTCGCCCATTTTCAA
CACGACTCGAGGCACGCGCC

Downstream 100 bases:

>100_bases
CCTCGCCAGCCCAGAAAGCACACTGGACCTGAACCTACCAAGAGGTGAACAACAATGACCCAGTTCAAGCGTCGCGACAT
ACTGAAAGGAATAGGGGGAC

Product: zinc-binding alcohol dehydrogenase

Products: NA

Alternate protein names: Xylitol dehydrogenase; XDH [H]

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MKAKALVLEKQRELSLRDIDLPDQLGPDDVRIRIHTVGICGSDVHYYTHGRIGPFVVREPMVLGHEASGVITEVGSHVSH
LKVGERVCMEPGIPDPTSRAAKLGVYNVDPGVRFWATPPVHGCLTPEVIHPAAFTFALPDSVSFAEGAMIEPFAIGMQAV
VKARMQPGDVCVVTGAGPIGLMVALAALAGGASEVLVSDLVEEKLAIAGRYAGITPVNVSRESLRAAVDRRCGEDWGADV
VFEASGSPRVYDDVLACTRPAGAIVLVGMPVEPVTFDIVSAQAKELRIETVFRYANVYDRAIDLIAAGKVDLKPLISETF
DFDESITAFERAASARPHDVKLQITLDA

Sequences:

>Translated_348_residues
MKAKALVLEKQRELSLRDIDLPDQLGPDDVRIRIHTVGICGSDVHYYTHGRIGPFVVREPMVLGHEASGVITEVGSHVSH
LKVGERVCMEPGIPDPTSRAAKLGVYNVDPGVRFWATPPVHGCLTPEVIHPAAFTFALPDSVSFAEGAMIEPFAIGMQAV
VKARMQPGDVCVVTGAGPIGLMVALAALAGGASEVLVSDLVEEKLAIAGRYAGITPVNVSRESLRAAVDRRCGEDWGADV
VFEASGSPRVYDDVLACTRPAGAIVLVGMPVEPVTFDIVSAQAKELRIETVFRYANVYDRAIDLIAAGKVDLKPLISETF
DFDESITAFERAASARPHDVKLQITLDA
>Mature_348_residues
MKAKALVLEKQRELSLRDIDLPDQLGPDDVRIRIHTVGICGSDVHYYTHGRIGPFVVREPMVLGHEASGVITEVGSHVSH
LKVGERVCMEPGIPDPTSRAAKLGVYNVDPGVRFWATPPVHGCLTPEVIHPAAFTFALPDSVSFAEGAMIEPFAIGMQAV
VKARMQPGDVCVVTGAGPIGLMVALAALAGGASEVLVSDLVEEKLAIAGRYAGITPVNVSRESLRAAVDRRCGEDWGADV
VFEASGSPRVYDDVLACTRPAGAIVLVGMPVEPVTFDIVSAQAKELRIETVFRYANVYDRAIDLIAAGKVDLKPLISETF
DFDESITAFERAASARPHDVKLQITLDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI156627571, Length=328, Percent_Identity=40.8536585365854, Blast_Score=251, Evalue=6e-67,
Organism=Escherichia coli, GI1788073, Length=319, Percent_Identity=36.9905956112853, Blast_Score=203, Evalue=1e-53,
Organism=Escherichia coli, GI1790045, Length=340, Percent_Identity=30.2941176470588, Blast_Score=135, Evalue=5e-33,
Organism=Escherichia coli, GI1790718, Length=319, Percent_Identity=28.2131661442006, Blast_Score=126, Evalue=3e-30,
Organism=Escherichia coli, GI1787863, Length=348, Percent_Identity=28.735632183908, Blast_Score=124, Evalue=6e-30,
Organism=Escherichia coli, GI1788075, Length=352, Percent_Identity=28.6931818181818, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1788407, Length=342, Percent_Identity=28.0701754385965, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI226510992, Length=341, Percent_Identity=28.7390029325513, Blast_Score=95, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17562876, Length=331, Percent_Identity=42.2960725075529, Blast_Score=276, Evalue=1e-74,
Organism=Caenorhabditis elegans, GI17562878, Length=313, Percent_Identity=43.4504792332268, Blast_Score=252, Evalue=2e-67,
Organism=Saccharomyces cerevisiae, GI6323099, Length=346, Percent_Identity=41.907514450867, Blast_Score=259, Evalue=4e-70,
Organism=Saccharomyces cerevisiae, GI6319955, Length=333, Percent_Identity=38.4384384384384, Blast_Score=232, Evalue=7e-62,
Organism=Saccharomyces cerevisiae, GI6322619, Length=333, Percent_Identity=38.4384384384384, Blast_Score=231, Evalue=1e-61,
Organism=Saccharomyces cerevisiae, GI6319257, Length=325, Percent_Identity=25.8461538461538, Blast_Score=96, Evalue=6e-21,
Organism=Saccharomyces cerevisiae, GI6319258, Length=388, Percent_Identity=24.2268041237113, Blast_Score=91, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6323729, Length=307, Percent_Identity=26.0586319218241, Blast_Score=64, Evalue=4e-11,
Organism=Drosophila melanogaster, GI17137530, Length=340, Percent_Identity=38.2352941176471, Blast_Score=228, Evalue=4e-60,
Organism=Drosophila melanogaster, GI17737897, Length=340, Percent_Identity=38.5294117647059, Blast_Score=223, Evalue=1e-58,
Organism=Drosophila melanogaster, GI221457811, Length=307, Percent_Identity=29.9674267100977, Blast_Score=135, Evalue=4e-32,
Organism=Drosophila melanogaster, GI45550770, Length=307, Percent_Identity=29.9674267100977, Blast_Score=135, Evalue=4e-32,
Organism=Drosophila melanogaster, GI45551930, Length=307, Percent_Identity=29.9674267100977, Blast_Score=135, Evalue=4e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR002328
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: =1.1.1.9 [H]

Molecular weight: Translated: 37229; Mature: 37229

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS00059 ADH_ZINC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAKALVLEKQRELSLRDIDLPDQLGPDDVRIRIHTVGICGSDVHYYTHGRIGPFVVREP
CCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEECCCCCCEEEECC
MVLGHEASGVITEVGSHVSHLKVGERVCMEPGIPDPTSRAAKLGVYNVDPGVRFWATPPV
EEECCCCCCHHHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHEEEEEECCCCCEEEECCCC
HGCLTPEVIHPAAFTFALPDSVSFAEGAMIEPFAIGMQAVVKARMQPGDVCVVTGAGPIG
CCCCCHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHH
LMVALAALAGGASEVLVSDLVEEKLAIAGRYAGITPVNVSRESLRAAVDRRCGEDWGADV
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCE
VFEASGSPRVYDDVLACTRPAGAIVLVGMPVEPVTFDIVSAQAKELRIETVFRYANVYDR
EEECCCCCCHHHHHHHHCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH
AIDLIAAGKVDLKPLISETFDFDESITAFERAASARPHDVKLQITLDA
HHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEEECC
>Mature Secondary Structure
MKAKALVLEKQRELSLRDIDLPDQLGPDDVRIRIHTVGICGSDVHYYTHGRIGPFVVREP
CCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEECCCCCCEEEECC
MVLGHEASGVITEVGSHVSHLKVGERVCMEPGIPDPTSRAAKLGVYNVDPGVRFWATPPV
EEECCCCCCHHHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHEEEEEECCCCCEEEECCCC
HGCLTPEVIHPAAFTFALPDSVSFAEGAMIEPFAIGMQAVVKARMQPGDVCVVTGAGPIG
CCCCCHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHH
LMVALAALAGGASEVLVSDLVEEKLAIAGRYAGITPVNVSRESLRAAVDRRCGEDWGADV
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCE
VFEASGSPRVYDDVLACTRPAGAIVLVGMPVEPVTFDIVSAQAKELRIETVFRYANVYDR
EEECCCCCCHHHHHHHHCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH
AIDLIAAGKVDLKPLISETFDFDESITAFERAASARPHDVKLQITLDA
HHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]