Click here to switch to the map view.

The map label for this gene is ymgE [H]

Identifier: 92114705

GI number: 92114705

Start: 2899898

End: 2900146

Strand: Direct

Name: ymgE [H]

Synonym: Csal_2587

Alternate gene names: 92114705

Gene position: 2899898-2900146 (Clockwise)

Preceding gene: 92114697

Following gene: 92114706

Centisome position: 78.45

GC content: 65.46

Gene sequence:

>249_bases
ATGGGCATCATCGCATGGATCGTCTTCGGCCTGCTGGCCGGTATCGTCGCCAAGCTCATCATGCCGGGCCGCGATCCCGG
CGGCCTCATCGTCAGCCTCATCCTCGGGGTACTCGGCGCCATCGTCGGCGGCTGGATCGGTACCGCGCTGGGCTTCGGCA
CGGTGGATGGCTTCAACCTCGGCAGCTTCGCCATCGCCGTGCTCGGGGCCATCATCCTCCTGGGGCTCTACCGCATCGTG
AAGAAATGA

Upstream 100 bases:

>100_bases
ACTCGCTTGCACACCGTGGCCACCCGGACCACGCTCATAACGCGACGCTTGCGTCGCAAGCACCCCCTTCATTGACAAGG
AATCGCCTGGAGGAACCGTC

Downstream 100 bases:

>100_bases
CCCTTCCCCGTCCGCGCACGCCGGCCAGGTGCTGGCGTGCGCGGGCCGCCATGCCCGGCAAAACGGCAGTCTTCGCCGAG
CATGGCACGACTTCTGCAAC

Product: transglycosylase-associated protein

Products: NA

Alternate protein names: Transglycosylase-associated gene protein [H]

Number of amino acids: Translated: 82; Mature: 81

Protein sequence:

>82_residues
MGIIAWIVFGLLAGIVAKLIMPGRDPGGLIVSLILGVLGAIVGGWIGTALGFGTVDGFNLGSFAIAVLGAIILLGLYRIV
KK

Sequences:

>Translated_82_residues
MGIIAWIVFGLLAGIVAKLIMPGRDPGGLIVSLILGVLGAIVGGWIGTALGFGTVDGFNLGSFAIAVLGAIILLGLYRIV
KK
>Mature_81_residues
GIIAWIVFGLLAGIVAKLIMPGRDPGGLIVSLILGVLGAIVGGWIGTALGFGTVDGFNLGSFAIAVLGAIILLGLYRIVK
K

Specific function: Unknown

COG id: COG2261

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0410 family [H]

Homologues:

Organism=Escherichia coli, GI1787445, Length=83, Percent_Identity=59.0361445783133, Blast_Score=98, Evalue=1e-22,
Organism=Escherichia coli, GI1788096, Length=82, Percent_Identity=60.9756097560976, Blast_Score=91, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007341 [H]

Pfam domain/function: PF04226 Transgly_assoc [H]

EC number: NA

Molecular weight: Translated: 8290; Mature: 8159

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIIAWIVFGLLAGIVAKLIMPGRDPGGLIVSLILGVLGAIVGGWIGTALGFGTVDGFNL
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
GSFAIAVLGAIILLGLYRIVKK
HHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
GIIAWIVFGLLAGIVAKLIMPGRDPGGLIVSLILGVLGAIVGGWIGTALGFGTVDGFNL
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
GSFAIAVLGAIILLGLYRIVKK
HHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA