| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is hflD
Identifier: 92114563
GI number: 92114563
Start: 2749906
End: 2750550
Strand: Direct
Name: hflD
Synonym: Csal_2445
Alternate gene names: 92114563
Gene position: 2749906-2750550 (Clockwise)
Preceding gene: 92114562
Following gene: 92114564
Centisome position: 74.39
GC content: 65.43
Gene sequence:
>645_bases ATGACACCGACCCCGATTCAGAACGCGCCGCAGAGCGCTGTCACACGCCAGGCCCTGGCGTTGGCCGGTGTCTTTCAGGC CGCCGCGGTGGTCGATCAACTCGCGCGCACCGGGCAATGCGACGAACGCGCCTGGAACACGCTGATTCGCGCCACGCTGG ATACCAATCCCGACAGTTTCGCGACCATCTACGGTGGCCACCACAACAACCTGCGCCTGGGCATCGATACCCTCAGCGCC GTGATGAACCGCCAGCACAGCGATCCCGCCGTCATGCGCTACGGGTTTTCGCTGGTCCTGCTGATGCAGAAGCTGCGCAA GGACGACGCCATGATGGCGTCGCTGGGGGAGCGCCTGACCCGCATCCAGGGTCAGGCCGAGCATTTCGGCGACACTCACG AGAACGTGATCGCCAGCCTCGGTCAGCTGTACCAGGACACCTTGTCCACGTTCCGCTACCGCATCGTCGTGCAGGGCGAC CCCAGCCTGCTGCAAAGCCGCATGATGCCCGAGCGCGTGCGTGCCGCCCTGCTCACCGGGGTGCGCTTCGCCCTGCTCTG GCACCAGCAGGGTGGCCGCCGCTGGAAACTGCTGTTTCAACGCCAGGGCATCAAGAAGTCCCTGGCCGCTCTAGATGGCC ACTGA
Upstream 100 bases:
>100_bases CGGGACAGTCCCTGGTGCTCTACGACGGCGACATCTGCCTGGGCGGTGGCGTCATCCGTTCGACCTGGAACCACAGCGAG CCTCGAGGAGATAGCGCCGC
Downstream 100 bases:
>100_bases GCGCTGCGCCGCGCGATTCGATTCACAATCAGGAAGACGACACCCATGGAATTGTCCGCCCTCACCGCCCTGTCCCCCGT CGATGGCCGCTATGGCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MTPTPIQNAPQSAVTRQALALAGVFQAAAVVDQLARTGQCDERAWNTLIRATLDTNPDSFATIYGGHHNNLRLGIDTLSA VMNRQHSDPAVMRYGFSLVLLMQKLRKDDAMMASLGERLTRIQGQAEHFGDTHENVIASLGQLYQDTLSTFRYRIVVQGD PSLLQSRMMPERVRAALLTGVRFALLWHQQGGRRWKLLFQRQGIKKSLAALDGH
Sequences:
>Translated_214_residues MTPTPIQNAPQSAVTRQALALAGVFQAAAVVDQLARTGQCDERAWNTLIRATLDTNPDSFATIYGGHHNNLRLGIDTLSA VMNRQHSDPAVMRYGFSLVLLMQKLRKDDAMMASLGERLTRIQGQAEHFGDTHENVIASLGQLYQDTLSTFRYRIVVQGD PSLLQSRMMPERVRAALLTGVRFALLWHQQGGRRWKLLFQRQGIKKSLAALDGH >Mature_213_residues TPTPIQNAPQSAVTRQALALAGVFQAAAVVDQLARTGQCDERAWNTLIRATLDTNPDSFATIYGGHHNNLRLGIDTLSAV MNRQHSDPAVMRYGFSLVLLMQKLRKDDAMMASLGERLTRIQGQAEHFGDTHENVIASLGQLYQDTLSTFRYRIVVQGDP SLLQSRMMPERVRAALLTGVRFALLWHQQGGRRWKLLFQRQGIKKSLAALDGH
Specific function: Unknown
COG id: COG2915
COG function: function code R; Uncharacterized protein involved in purine metabolism
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hflD family
Homologues:
Organism=Escherichia coli, GI1787377, Length=186, Percent_Identity=40.8602150537634, Blast_Score=146, Evalue=1e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HFLD_CHRSD (Q1QUR6)
Other databases:
- EMBL: CP000285 - RefSeq: YP_574491.1 - ProteinModelPortal: Q1QUR6 - SMR: Q1QUR6 - STRING: Q1QUR6 - GeneID: 4026965 - GenomeReviews: CP000285_GR - KEGG: csa:Csal_2445 - NMPDR: fig|290398.4.peg.2986 - eggNOG: COG2915 - HOGENOM: HBG739519 - OMA: LLHNYFR - ProtClustDB: PRK00218 - BioCyc: CSAL290398:CSAL_2445-MONOMER - GO: GO:0005737 - HAMAP: MF_00695 - InterPro: IPR007451 - ProDom: PD037115
Pfam domain/function: PF04356 DUF489; SSF101322 DUF489
EC number: NA
Molecular weight: Translated: 23864; Mature: 23733
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTPIQNAPQSAVTRQALALAGVFQAAAVVDQLARTGQCDERAWNTLIRATLDTNPDSF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCE ATIYGGHHNNLRLGIDTLSAVMNRQHSDPAVMRYGFSLVLLMQKLRKDDAMMASLGERLT EEEECCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIQGQAEHFGDTHENVIASLGQLYQDTLSTFRYRIVVQGDPSLLQSRMMPERVRAALLTG HHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHCCHHHHHHHHHHH VRFALLWHQQGGRRWKLLFQRQGIKKSLAALDGH HHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHCCC >Mature Secondary Structure TPTPIQNAPQSAVTRQALALAGVFQAAAVVDQLARTGQCDERAWNTLIRATLDTNPDSF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCE ATIYGGHHNNLRLGIDTLSAVMNRQHSDPAVMRYGFSLVLLMQKLRKDDAMMASLGERLT EEEECCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIQGQAEHFGDTHENVIASLGQLYQDTLSTFRYRIVVQGDPSLLQSRMMPERVRAALLTG HHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHCCHHHHHHHHHHH VRFALLWHQQGGRRWKLLFQRQGIKKSLAALDGH HHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA