| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
Click here to switch to the map view.
The map label for this gene is bcsP31 [H]
Identifier: 92114526
GI number: 92114526
Start: 2702965
End: 2703945
Strand: Direct
Name: bcsP31 [H]
Synonym: Csal_2408
Alternate gene names: 92114526
Gene position: 2702965-2703945 (Clockwise)
Preceding gene: 92114525
Following gene: 92114527
Centisome position: 73.12
GC content: 63.81
Gene sequence:
>981_bases ATGTCTTTCAAGACACAAGCCTTGACCGCCACCCTCGCCGGGGCCATGTGCCTCGCCACCGCGGCGCAAGCCGATCGCGA GGATTGGCCGGACAACTTCACCGTGGGCACGGCCAGCCAGGGCGGGACCTACTTCGTCTACGGTTCCGGCTGGGCCAACT TGATCGCCGACGAGCTGGGCGTTTCCGGCGGTGGCGAAGTCACCGGCGGCCCCAACCAGAACCTGGCGTTGGTGCACACC GGTGAGCTGGCCCTCGGCCTCACCACCATGGGTCCGGCCGCCGAGGCCCTGGCCGGCGAGAGCCCGCTGGCACCCGGCGT GAAGATGGACAACGTCTGTGCGCTGTTCCCGATGTACGAGACGCCGTTCTCCATCACCACCCTGGCCGATAGCGGCATCG AGTCGATCTCCGATATTCCGGACGGTGCCAGCATCGGCTTCGGGCCGGCGGCCTCGACGTCCGATACGTACTTCCCGGCC ATCCTCGAAGAGCTCGGCGTGGATTTCGAACGCCGCAACGGCGGCTGGAGCGACCTGGGCGGACAGCTCCAGGACGGGCT GATCGACGTCATCGCATTCGCCGCCGGGATTCCGATTCCCGCCGTGAGCCAGCTTGAGGTGCAAACCGATGTCAACATCA TCGAGTTCACCGAAGAAGAGCAGCAGAAAGTTCTCGAGGCCTTCCCGGTCTCGCCGTTCCAGATTCCGGCCAGCACTTAC CAGACGCTCGAGGAAGATGCGCGCGCAGTGTCCATGTGGAACTTCACCATCGCCGGCTGTGACCTCCCCGAAGACTTTGT CTATGAGATCACCAAGCTGAGCATGGAGAACAACGACCGGATGCGCGACATTCACCGCAGCGCCGAGTTCAGCGTGCCCG AGAACCTCAAGTACAACACCGTGCTGCCGTTCCATCCGGGCGCCGTGCGTTGGTACGAAGAGAACGGCTACGACATCCCG GAAGACCTGAAACTCGACTGA
Upstream 100 bases:
>100_bases ATGGCGGTTGCCACCTATAGGGCGTATTTCACGAGTCCCGCCCTTCGGGGACTCGAACGGGAATACGCAACAACCACAAC CGAAATCGGGAGCATTCGCC
Downstream 100 bases:
>100_bases TCGCGTGTTTCTTCAATGCCCCATGCCCATGCGGCATGGGGTACGTCGTTCGTTGCCGTTCCTAGGGTGATGCCCATGTC CCAGAATTCCCACTCTCGTC
Product: TRAP transporter solute receptor TAXI family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MSFKTQALTATLAGAMCLATAAQADREDWPDNFTVGTASQGGTYFVYGSGWANLIADELGVSGGGEVTGGPNQNLALVHT GELALGLTTMGPAAEALAGESPLAPGVKMDNVCALFPMYETPFSITTLADSGIESISDIPDGASIGFGPAASTSDTYFPA ILEELGVDFERRNGGWSDLGGQLQDGLIDVIAFAAGIPIPAVSQLEVQTDVNIIEFTEEEQQKVLEAFPVSPFQIPASTY QTLEEDARAVSMWNFTIAGCDLPEDFVYEITKLSMENNDRMRDIHRSAEFSVPENLKYNTVLPFHPGAVRWYEENGYDIP EDLKLD
Sequences:
>Translated_326_residues MSFKTQALTATLAGAMCLATAAQADREDWPDNFTVGTASQGGTYFVYGSGWANLIADELGVSGGGEVTGGPNQNLALVHT GELALGLTTMGPAAEALAGESPLAPGVKMDNVCALFPMYETPFSITTLADSGIESISDIPDGASIGFGPAASTSDTYFPA ILEELGVDFERRNGGWSDLGGQLQDGLIDVIAFAAGIPIPAVSQLEVQTDVNIIEFTEEEQQKVLEAFPVSPFQIPASTY QTLEEDARAVSMWNFTIAGCDLPEDFVYEITKLSMENNDRMRDIHRSAEFSVPENLKYNTVLPFHPGAVRWYEENGYDIP EDLKLD >Mature_325_residues SFKTQALTATLAGAMCLATAAQADREDWPDNFTVGTASQGGTYFVYGSGWANLIADELGVSGGGEVTGGPNQNLALVHTG ELALGLTTMGPAAEALAGESPLAPGVKMDNVCALFPMYETPFSITTLADSGIESISDIPDGASIGFGPAASTSDTYFPAI LEELGVDFERRNGGWSDLGGQLQDGLIDVIAFAAGIPIPAVSQLEVQTDVNIIEFTEEEQQKVLEAFPVSPFQIPASTYQ TLEEDARAVSMWNFTIAGCDLPEDFVYEITKLSMENNDRMRDIHRSAEFSVPENLKYNTVLPFHPGAVRWYEENGYDIPE DLKLD
Specific function: Unknown
COG id: COG2358
COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR011852 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 34955; Mature: 34824
Theoretical pI: Translated: 3.75; Mature: 3.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFKTQALTATLAGAMCLATAAQADREDWPDNFTVGTASQGGTYFVYGSGWANLIADELG CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEECCCHHHHHHHHHC VSGGGEVTGGPNQNLALVHTGELALGLTTMGPAAEALAGESPLAPGVKMDNVCALFPMYE CCCCCCCCCCCCCCEEEEEECCEEEEEECCCCHHHHHCCCCCCCCCCCCCCEEEEEECCC TPFSITTLADSGIESISDIPDGASIGFGPAASTSDTYFPAILEELGVDFERRNGGWSDLG CCEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCHHHCC GQLQDGLIDVIAFAAGIPIPAVSQLEVQTDVNIIEFTEEEQQKVLEAFPVSPFQIPASTY CHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEECHHHHHHHHHHCCCCCEECCHHHH QTLEEDARAVSMWNFTIAGCDLPEDFVYEITKLSMENNDRMRDIHRSAEFSVPENLKYNT HHHHHHHHEEEEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCE VLPFHPGAVRWYEENGYDIPEDLKLD EECCCCCEEEEECCCCCCCCCCCCCC >Mature Secondary Structure SFKTQALTATLAGAMCLATAAQADREDWPDNFTVGTASQGGTYFVYGSGWANLIADELG CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEECCCHHHHHHHHHC VSGGGEVTGGPNQNLALVHTGELALGLTTMGPAAEALAGESPLAPGVKMDNVCALFPMYE CCCCCCCCCCCCCCEEEEEECCEEEEEECCCCHHHHHCCCCCCCCCCCCCCEEEEEECCC TPFSITTLADSGIESISDIPDGASIGFGPAASTSDTYFPAILEELGVDFERRNGGWSDLG CCEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCHHHCC GQLQDGLIDVIAFAAGIPIPAVSQLEVQTDVNIIEFTEEEQQKVLEAFPVSPFQIPASTY CHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEECHHHHHHHHHHCCCCCEECCHHHH QTLEEDARAVSMWNFTIAGCDLPEDFVYEITKLSMENNDRMRDIHRSAEFSVPENLKYNT HHHHHHHHEEEEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCE VLPFHPGAVRWYEENGYDIPEDLKLD EECCCCCEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3133283 [H]