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The map label for this gene is vapA' [H]

Identifier: 92114462

GI number: 92114462

Start: 2632134

End: 2632415

Strand: Direct

Name: vapA' [H]

Synonym: Csal_2342

Alternate gene names: 92114462

Gene position: 2632134-2632415 (Clockwise)

Preceding gene: 92114459

Following gene: 92114464

Centisome position: 71.2

GC content: 64.89

Gene sequence:

>282_bases
ATGAACCGCATGCACAACCCCGCGCACCCTGGCGCCGTGCTGCGCGAGTACATCGGTGACATCTCAGTCACCGAGGCCGC
CAAGCGTCTGGGCGTCACGCGCGCTGCGCTGTCTCGCATTCTCAACGGCAATGCCGGTATCTCGGCGGATATGGCACTGC
GCCTTGAGCAGGCGCTGGGCACCAGCGCGGAGATGTGGCTGGAAATGCAACTCAAGTACGAACTCTGGCAGGCAGCACAA
CGGCCTCGCGCTCAGGTCACCCCCCTACACGCCGCAGGGTGA

Upstream 100 bases:

>100_bases
CAATGGAAACTGGCGACTTACCTTCACGTTCGATGGCGAAGACGCCATCTTGGTGGACTATCAGGACTATCACTAGCAGT
GACTATCACTAGGAGGCCGC

Downstream 100 bases:

>100_bases
CCGTTCAAACGACATCGCATTCAGGCCATCCAGCGCCAAGCAGGGTGGCTCCCTCCAATGAAGCGGCCAGGGGCGTCGAG
TGTCTGACGCCCCTCATGCC

Product: XRE family plasmid maintenance system antidote protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MNRMHNPAHPGAVLREYIGDISVTEAAKRLGVTRAALSRILNGNAGISADMALRLEQALGTSAEMWLEMQLKYELWQAAQ
RPRAQVTPLHAAG

Sequences:

>Translated_93_residues
MNRMHNPAHPGAVLREYIGDISVTEAAKRLGVTRAALSRILNGNAGISADMALRLEQALGTSAEMWLEMQLKYELWQAAQ
RPRAQVTPLHAAG
>Mature_93_residues
MNRMHNPAHPGAVLREYIGDISVTEAAKRLGVTRAALSRILNGNAGISADMALRLEQALGTSAEMWLEMQLKYELWQAAQ
RPRAQVTPLHAAG

Specific function: Unknown

COG id: COG3093

COG function: function code R; Plasmid maintenance system antidote protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013430
- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 10164; Mature: 10164

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRMHNPAHPGAVLREYIGDISVTEAAKRLGVTRAALSRILNGNAGISADMALRLEQALG
CCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
TSAEMWLEMQLKYELWQAAQRPRAQVTPLHAAG
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MNRMHNPAHPGAVLREYIGDISVTEAAKRLGVTRAALSRILNGNAGISADMALRLEQALG
CCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
TSAEMWLEMQLKYELWQAAQRPRAQVTPLHAAG
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8169216 [H]