| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is 92114400
Identifier: 92114400
GI number: 92114400
Start: 2567220
End: 2568296
Strand: Direct
Name: 92114400
Synonym: Csal_2279
Alternate gene names: NA
Gene position: 2567220-2568296 (Clockwise)
Preceding gene: 92114399
Following gene: 92114402
Centisome position: 69.45
GC content: 51.07
Gene sequence:
>1077_bases ATGCGATCGACGACTGCCAAGGATCTTTATAACCTGATGGTAAGAGCCAACTGGGGCTTTTCCAGTACAATGTCCCGATC GAGAGGCTTTGGGGGAAAAGCACAACAACTAGATCGAAAATGCGCAACAAAAGCTGTAAAAAAAACGCTTTTTAATGACT CAGTGATATCTATTAGCTCTACTTATGTCGAAATTGTTGATGCTGGTAATCGCTTGAGAGGAATTACGTCTTTTTTTGGC CTCATGGGCCTGGTACCGACTCTAGTAGGCATGGGCGCATTTCTCTATGTTCTTTTTTTGTACAATGAGCGTCTTCCTCT GGTTGTGTATGTTTTTATATGGCTGGCGGTTTTTACATTCGTATTCATAGCTGCTCCTTGTCTGAACACACTTTTACGCT GGGACATGTTCCGCAAAACCCACTACCCCATGCGCTTCAATCGTCGTGATCGTAAGGTCTATGCCTGGTCTCAGGATATG GGCGTGGTCACCATGAACTGGGACGATATTCAGTTCTACACAAGCCAATCGACAGCATCGGAAGATCGCCGAGGTTTGGC ACGCGATGAAATCCGTGGCTACGTAAGAGATCGCGCGGGCAACATGCTTTATCACCTGGTTTTTTTCAAGTATCAAGGTA GAAAGAACATGCAGGGCGCGCTGGAAATCTGGGAGCTGGTGCGTCGCTATATGGAAGAACCCGACGGCCATATCCAGGCC TATCAGGTCGATCAGCGCCTGCTGGATTTAGACGGTAAACGCGAGAGTTTCATCCACTCGCTGATCCAGGCCACGCAGGT GCTGGCCGATAGCCGTGCGGTCCAGCTGATTTTCGCGCCGATGGTCATGTGGGCAGGCACCGGCCGTATCATCGCGAAGT GGACTTGCCGCGTGCCGCGCTGGCCCGAGTGGGTCGAGGAAAAGTGCCGGGTTGATCCAAACGACCCTTACGTGCGCAAT CGCCACACCGAGCGCCCGCTGACCGCGAAGGAAATTCTCTGGCCACTGTTCTGCTACCTGCTCGGCTGGGCAGAGGTACT GGCGATTCTATATTTCTGCTTTCGGGGATATTTTTGA
Upstream 100 bases:
>100_bases GAATGTGCCTTCGGAGAGCGTGGTGAACCTGGGCCTGGTACGGCAAAGTTGGAAGTCGAAATGCAACGCCTAGAAGCCAT AACTCACAAGGAAGAGTGAT
Downstream 100 bases:
>100_bases GATGCAGGCCCCCTTGGCGACGAACATGCCGATTCTGTTCACGGCATAGCATGCTGGCTTCATGCCCCTTCGACTGCACC GGCAAGGTGGCAATGCCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MRSTTAKDLYNLMVRANWGFSSTMSRSRGFGGKAQQLDRKCATKAVKKTLFNDSVISISSTYVEIVDAGNRLRGITSFFG LMGLVPTLVGMGAFLYVLFLYNERLPLVVYVFIWLAVFTFVFIAAPCLNTLLRWDMFRKTHYPMRFNRRDRKVYAWSQDM GVVTMNWDDIQFYTSQSTASEDRRGLARDEIRGYVRDRAGNMLYHLVFFKYQGRKNMQGALEIWELVRRYMEEPDGHIQA YQVDQRLLDLDGKRESFIHSLIQATQVLADSRAVQLIFAPMVMWAGTGRIIAKWTCRVPRWPEWVEEKCRVDPNDPYVRN RHTERPLTAKEILWPLFCYLLGWAEVLAILYFCFRGYF
Sequences:
>Translated_358_residues MRSTTAKDLYNLMVRANWGFSSTMSRSRGFGGKAQQLDRKCATKAVKKTLFNDSVISISSTYVEIVDAGNRLRGITSFFG LMGLVPTLVGMGAFLYVLFLYNERLPLVVYVFIWLAVFTFVFIAAPCLNTLLRWDMFRKTHYPMRFNRRDRKVYAWSQDM GVVTMNWDDIQFYTSQSTASEDRRGLARDEIRGYVRDRAGNMLYHLVFFKYQGRKNMQGALEIWELVRRYMEEPDGHIQA YQVDQRLLDLDGKRESFIHSLIQATQVLADSRAVQLIFAPMVMWAGTGRIIAKWTCRVPRWPEWVEEKCRVDPNDPYVRN RHTERPLTAKEILWPLFCYLLGWAEVLAILYFCFRGYF >Mature_358_residues MRSTTAKDLYNLMVRANWGFSSTMSRSRGFGGKAQQLDRKCATKAVKKTLFNDSVISISSTYVEIVDAGNRLRGITSFFG LMGLVPTLVGMGAFLYVLFLYNERLPLVVYVFIWLAVFTFVFIAAPCLNTLLRWDMFRKTHYPMRFNRRDRKVYAWSQDM GVVTMNWDDIQFYTSQSTASEDRRGLARDEIRGYVRDRAGNMLYHLVFFKYQGRKNMQGALEIWELVRRYMEEPDGHIQA YQVDQRLLDLDGKRESFIHSLIQATQVLADSRAVQLIFAPMVMWAGTGRIIAKWTCRVPRWPEWVEEKCRVDPNDPYVRN RHTERPLTAKEILWPLFCYLLGWAEVLAILYFCFRGYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41928; Mature: 41928
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: PS00267 TACHYKININ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSTTAKDLYNLMVRANWGFSSTMSRSRGFGGKAQQLDRKCATKAVKKTLFNDSVISISS CCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHH TYVEIVDAGNRLRGITSFFGLMGLVPTLVGMGAFLYVLFLYNERLPLVVYVFIWLAVFTF HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VFIAAPCLNTLLRWDMFRKTHYPMRFNRRDRKVYAWSQDMGVVTMNWDDIQFYTSQSTAS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEECCCCEEEEECCCCCC EDRRGLARDEIRGYVRDRAGNMLYHLVFFKYQGRKNMQGALEIWELVRRYMEEPDGHIQA HHHCCCHHHHHHHHHHHHHCCHHEEHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCEEH YQVDQRLLDLDGKRESFIHSLIQATQVLADSRAVQLIFAPMVMWAGTGRIIAKWTCRVPR HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEECCCC WPEWVEEKCRVDPNDPYVRNRHTERPLTAKEILWPLFCYLLGWAEVLAILYFCFRGYF CHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRSTTAKDLYNLMVRANWGFSSTMSRSRGFGGKAQQLDRKCATKAVKKTLFNDSVISISS CCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHH TYVEIVDAGNRLRGITSFFGLMGLVPTLVGMGAFLYVLFLYNERLPLVVYVFIWLAVFTF HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VFIAAPCLNTLLRWDMFRKTHYPMRFNRRDRKVYAWSQDMGVVTMNWDDIQFYTSQSTAS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEECCCCEEEEECCCCCC EDRRGLARDEIRGYVRDRAGNMLYHLVFFKYQGRKNMQGALEIWELVRRYMEEPDGHIQA HHHCCCHHHHHHHHHHHHHCCHHEEHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCEEH YQVDQRLLDLDGKRESFIHSLIQATQVLADSRAVQLIFAPMVMWAGTGRIIAKWTCRVPR HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEECCCC WPEWVEEKCRVDPNDPYVRNRHTERPLTAKEILWPLFCYLLGWAEVLAILYFCFRGYF CHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA