| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is yjgA [C]
Identifier: 92114355
GI number: 92114355
Start: 2503958
End: 2504485
Strand: Direct
Name: yjgA [C]
Synonym: Csal_2233
Alternate gene names: 92114355
Gene position: 2503958-2504485 (Clockwise)
Preceding gene: 92114353
Following gene: 92114363
Centisome position: 67.74
GC content: 65.15
Gene sequence:
>528_bases ATGTCGACCGACCTCCCCGATCAACACGACGACGACGCCGCCGAGCGCCCCAGCAAGACCCAGCGCAAGAACGAAATGAA GGCCCTGCAAGCGCTGGGCGAGCGCATCATCGCGATGAGCGAGGCCGAACGTGCGCGCTTGCCACTTTCCGAGGACATGC GCTTCGCCGTCGAGGAAACCTCGCGCATCCGCTCCCACGAAGGCCGCCGACGTCACATGCAATACGTCGGCAAGGTCATG CGCCGCGAGGACCTGCCTGCCATCCAGGCGGCCTTCGACGCCATGGAGCAGGAAGCCGTGCGCCGCGACCAGGCCTTTCA TCGGCTCGAGCGCTGGCGTGACCGGCTGATCGACGATACCAGCGCCGAGTCGCTCGAGGCCTTCATCGCCGAATATCCCG ATGTCGATCGACAGACGCTGCGTCAACTGATCCGCAACGCCCAGAGCGAACGCCAGCGTGAAAAACCGCCGACGAACGCC CGCAAACTCTTCCGTCTGATCCGCGAGACGGCAGGCATGCCACGCTAG
Upstream 100 bases:
>100_bases CTGTACTCATATGGCCCGAGACACTGCTCAAAGGCTCGATAGGATTGTCGAGGAAGCCTGATATACTGCACGGTCATCCC CGAAGCATGATGGTAATGCA
Downstream 100 bases:
>100_bases GCCGCATGCCAGGCGCCATCAGGACTGCGTGCCGCCTACGGTCAGTTCATCGACCTTGAGTGTCGGTTGGCCCACGCCAA CCGGCACACCCTGCCCTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MSTDLPDQHDDDAAERPSKTQRKNEMKALQALGERIIAMSEAERARLPLSEDMRFAVEETSRIRSHEGRRRHMQYVGKVM RREDLPAIQAAFDAMEQEAVRRDQAFHRLERWRDRLIDDTSAESLEAFIAEYPDVDRQTLRQLIRNAQSERQREKPPTNA RKLFRLIRETAGMPR
Sequences:
>Translated_175_residues MSTDLPDQHDDDAAERPSKTQRKNEMKALQALGERIIAMSEAERARLPLSEDMRFAVEETSRIRSHEGRRRHMQYVGKVM RREDLPAIQAAFDAMEQEAVRRDQAFHRLERWRDRLIDDTSAESLEAFIAEYPDVDRQTLRQLIRNAQSERQREKPPTNA RKLFRLIRETAGMPR >Mature_174_residues STDLPDQHDDDAAERPSKTQRKNEMKALQALGERIIAMSEAERARLPLSEDMRFAVEETSRIRSHEGRRRHMQYVGKVMR REDLPAIQAAFDAMEQEAVRRDQAFHRLERWRDRLIDDTSAESLEAFIAEYPDVDRQTLRQLIRNAQSERQREKPPTNAR KLFRLIRETAGMPR
Specific function: Unknown
COG id: COG3028
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0307 family [H]
Homologues:
Organism=Escherichia coli, GI1790681, Length=157, Percent_Identity=40.7643312101911, Blast_Score=110, Evalue=4e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023153 - InterPro: IPR006839 [H]
Pfam domain/function: PF04751 DUF615 [H]
EC number: NA
Molecular weight: Translated: 20614; Mature: 20482
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTDLPDQHDDDAAERPSKTQRKNEMKALQALGERIIAMSEAERARLPLSEDMRFAVEET CCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH SRIRSHEGRRRHMQYVGKVMRREDLPAIQAAFDAMEQEAVRRDQAFHRLERWRDRLIDDT HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SAESLEAFIAEYPDVDRQTLRQLIRNAQSERQREKPPTNARKLFRLIRETAGMPR CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure STDLPDQHDDDAAERPSKTQRKNEMKALQALGERIIAMSEAERARLPLSEDMRFAVEET CCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH SRIRSHEGRRRHMQYVGKVMRREDLPAIQAAFDAMEQEAVRRDQAFHRLERWRDRLIDDT HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SAESLEAFIAEYPDVDRQTLRQLIRNAQSERQREKPPTNARKLFRLIRETAGMPR CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA