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The map label for this gene is yhbH [C]

Identifier: 92114349

GI number: 92114349

Start: 2499071

End: 2499379

Strand: Direct

Name: yhbH [C]

Synonym: Csal_2227

Alternate gene names: 92114349

Gene position: 2499071-2499379 (Clockwise)

Preceding gene: 92114348

Following gene: 92114350

Centisome position: 67.6

GC content: 57.61

Gene sequence:

>309_bases
ATGCAAGTCAATATCACCGGTCATCACATCGAATTGACCGATGCCCTGCGCGACTACGTCAATGAAAAGCTCGCACGTCT
GGAACGGCATTACGACAACATCACCACCGTTCAAGTCACGTTATCCATCGAAAAGGAACGTCACTTGGCCGCATGCACGC
TTCATGCCGCAGGCGCCGACCTGCACGCCGATGTGCAGAGCGACGACATGTACGCTGCCATCGACGCCCTCACCGACAAG
CTCGACCGCCAGCTCGTCAAACACAAAGAAAAGATGCAGGCACGCGCCCAGGGCGCCGGTGCCCGTTGA

Upstream 100 bases:

>100_bases
GACTCGCCGCGGTCGTCGACACCCAGGCATCGCCCGGGGCTATGCATTGCCCTAAAAAGGGTTACAATCAAAGTGCCAAC
CGATGGAATAGGAGCGTGCC

Downstream 100 bases:

>100_bases
ATCCGCCATGACACTGGAAAGCATCCTGCCCCCCGAGCGCGCCCTCTTCGGCGTTGCCGGGGGGAGCAAGAAGCGTGTGC
TGGAATTCTTCAGCACCTTC

Product: 30S ribosomal protein S30P / sigma 54 modulation protein

Products: NA

Alternate protein names: ORF107 [H]

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MQVNITGHHIELTDALRDYVNEKLARLERHYDNITTVQVTLSIEKERHLAACTLHAAGADLHADVQSDDMYAAIDALTDK
LDRQLVKHKEKMQARAQGAGAR

Sequences:

>Translated_102_residues
MQVNITGHHIELTDALRDYVNEKLARLERHYDNITTVQVTLSIEKERHLAACTLHAAGADLHADVQSDDMYAAIDALTDK
LDRQLVKHKEKMQARAQGAGAR
>Mature_102_residues
MQVNITGHHIELTDALRDYVNEKLARLERHYDNITTVQVTLSIEKERHLAACTLHAAGADLHADVQSDDMYAAIDALTDK
LDRQLVKHKEKMQARAQGAGAR

Specific function: Probably modulates the activity of sigma(54) (rpoN) [H]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma(54) modulation protein family [H]

Homologues:

Organism=Escherichia coli, GI1789595, Length=93, Percent_Identity=51.6129032258064, Blast_Score=106, Evalue=3e-25,
Organism=Escherichia coli, GI1788949, Length=95, Percent_Identity=36.8421052631579, Blast_Score=65, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 11445; Mature: 11445

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVNITGHHIELTDALRDYVNEKLARLERHYDNITTVQVTLSIEKERHLAACTLHAAGAD
CEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCHHHEEEECCCCC
LHADVQSDDMYAAIDALTDKLDRQLVKHKEKMQARAQGAGAR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQVNITGHHIELTDALRDYVNEKLARLERHYDNITTVQVTLSIEKERHLAACTLHAAGAD
CEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCHHHEEEECCCCC
LHADVQSDDMYAAIDALTDKLDRQLVKHKEKMQARAQGAGAR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2695747; 3481423 [H]