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The map label for this gene is yjbQ [H]

Identifier: 92114231

GI number: 92114231

Start: 2379436

End: 2379861

Strand: Direct

Name: yjbQ [H]

Synonym: Csal_2109

Alternate gene names: 92114231

Gene position: 2379436-2379861 (Clockwise)

Preceding gene: 92114229

Following gene: 92114234

Centisome position: 64.37

GC content: 66.9

Gene sequence:

>426_bases
ATGTGGCACCGCACCACGCTGACCCTGCGTCCCCGTCGGCAAGGCTTTCACCTCGTCACCGACGAGATCCTCGAGCAACT
GCCGGTGCTCGCCGACGTGCGTCTCGGCCTGCTCCACCTGCAGTTGCTGCATACCTCCGCCTCGCTGACCCTCAACGAAA
ACGCCGATCCCGACGTGCGTCACGACATGGCACTCTACGCCGAACGGCTCGCTCCCCAGGGCATCGACGGCATGCAGCAC
ACGCTGGAGGGACCGGACGACATGCCGGCACATGTGCTGGCCAGTCTCTTCGGCACGCAAGTCACGCTCGCCGTCGACAA
TGGCCGATTGGCCACGGGCACCTGGCAGGGCATCTGGCTGGGCGAGCACCGTCGGCAGGGTGGCGCACGCCGACTCCTTG
CCACGCTCAACGGCGACGACGCATGA

Upstream 100 bases:

>100_bases
GACACGCCGAGGCACGCACGCCCGGTGACTGTCGATATAGGATTGTGCTGCCCAGGGCGCCTTTCAAGGCGCCGACCACC
ACGCATCGGGAGGAATGAAC

Downstream 100 bases:

>100_bases
ACCGTCGCGCTACCAGCCCAGCGCCTGCTTGACGAAGGGAATGGTCAACTTGCGCTGAGCGGAGAGAGAGGCACGATCGA
GCCGCGCCAGGGCATCGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MWHRTTLTLRPRRQGFHLVTDEILEQLPVLADVRLGLLHLQLLHTSASLTLNENADPDVRHDMALYAERLAPQGIDGMQH
TLEGPDDMPAHVLASLFGTQVTLAVDNGRLATGTWQGIWLGEHRRQGGARRLLATLNGDDA

Sequences:

>Translated_141_residues
MWHRTTLTLRPRRQGFHLVTDEILEQLPVLADVRLGLLHLQLLHTSASLTLNENADPDVRHDMALYAERLAPQGIDGMQH
TLEGPDDMPAHVLASLFGTQVTLAVDNGRLATGTWQGIWLGEHRRQGGARRLLATLNGDDA
>Mature_141_residues
MWHRTTLTLRPRRQGFHLVTDEILEQLPVLADVRLGLLHLQLLHTSASLTLNENADPDVRHDMALYAERLAPQGIDGMQH
TLEGPDDMPAHVLASLFGTQVTLAVDNGRLATGTWQGIWLGEHRRQGGARRLLATLNGDDA

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=139, Percent_Identity=58.273381294964, Blast_Score=165, Evalue=1e-42,
Organism=Drosophila melanogaster, GI221476594, Length=137, Percent_Identity=52.5547445255474, Blast_Score=162, Evalue=8e-41,
Organism=Drosophila melanogaster, GI221476589, Length=137, Percent_Identity=52.5547445255474, Blast_Score=161, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 15638; Mature: 15638

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWHRTTLTLRPRRQGFHLVTDEILEQLPVLADVRLGLLHLQLLHTSASLTLNENADPDVR
CCCCEEEEECCCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHH
HDMALYAERLAPQGIDGMQHTLEGPDDMPAHVLASLFGTQVTLAVDNGRLATGTWQGIWL
HHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHCCEEEEEECCCEEECCCCCEEEE
GEHRRQGGARRLLATLNGDDA
CHHHCCCCHHEEEEECCCCCC
>Mature Secondary Structure
MWHRTTLTLRPRRQGFHLVTDEILEQLPVLADVRLGLLHLQLLHTSASLTLNENADPDVR
CCCCEEEEECCCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHH
HDMALYAERLAPQGIDGMQHTLEGPDDMPAHVLASLFGTQVTLAVDNGRLATGTWQGIWL
HHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHCCEEEEEECCCEEECCCCCEEEE
GEHRRQGGARRLLATLNGDDA
CHHHCCCCHHEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]