Click here to switch to the map view.

The map label for this gene is 92114161

Identifier: 92114161

GI number: 92114161

Start: 2300842

End: 2301489

Strand: Direct

Name: 92114161

Synonym: Csal_2039

Alternate gene names: NA

Gene position: 2300842-2301489 (Clockwise)

Preceding gene: 92114160

Following gene: 92114162

Centisome position: 62.24

GC content: 65.12

Gene sequence:

>648_bases
ATGTACAGCGTCAAGGAAGCGTTCTATACCTTGCAGGGCGAAGGTGCACGCGCCGGACGGGCCAGCGTCTTCTGTCGCTT
CACGGGGTGCAACCTCTGGTCGGGACGGGAACGCGATCGTGCGCAGAGCCGTTGCCGTTTCTGCGATACCGACTTCGTCG
GCACCGACGGGCAGAACGGCGGACGCTTCGCGGACGCGCATGCCCTCGCCACGCACCTGCACCGACTCTGGCCCGGCACC
GACGACACGGCCGCAACGCCCTATGTGGTCTTCACGGGCGGGGAGCCGCTGCTGCAACTCGACACGGCACTGATCACGGC
GATGCGTGCCCATGGGTTCGAGGTCGCCGTCGAAACCAACGGTACGCTGACACCGCCCGACGGCATCGACTGGCTGTGCG
TGAGCCCCAAGGGCGACGCACCGTTGAGAATCACGCAGGGCGATGAACTCAAGCTGGTCTATCCCCAGGACGACGCGCCG
CCGGCGAATTTCACGCATCTGGACTTTGCGCATTTCTTCCTGCAGCCGATGGATCTCGCGCCCCGTGGCGGGCAAGGCAC
GACCATGACGGATACCGTCGCCTACTGCCTCGACCATCCGCAATGGCGCCTCGCGCTGCAAACCCACAAGATCGCGGGAA
TCGACTGA

Upstream 100 bases:

>100_bases
CCTGCGGTCACTGCGGCAGCTGTCGTGAACGTCTCGCGGCCTTCGCCGCCCAGGGCGTGACGGACCCTCTGGTCTATGCC
GGTGCGGGAGCCTCTGACTG

Downstream 100 bases:

>100_bases
TGACCCTTTTCGTCAATCATCTCACCCACATCGATGCGTCGCTGTGGTCGCCCGAACACGGGCTGACGGGCGTCAGCTGG
CATGTCGATGCCGAACTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Organic Radical Activating; Organic Radical Activating Protein; Organic Radical Activating-Like Protein; Queuosine Biosynthesis Protein QueE; Radical SAM; NrdG Protein; Organic Radical Activating Protein; Radical SAM Superfamily Protein; 50S Ribosomal Protein L; Radical Sam Domain Protein; GntS Family Protein; Radical SAM Family Protein; Radical SAM Superfamily

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MYSVKEAFYTLQGEGARAGRASVFCRFTGCNLWSGRERDRAQSRCRFCDTDFVGTDGQNGGRFADAHALATHLHRLWPGT
DDTAATPYVVFTGGEPLLQLDTALITAMRAHGFEVAVETNGTLTPPDGIDWLCVSPKGDAPLRITQGDELKLVYPQDDAP
PANFTHLDFAHFFLQPMDLAPRGGQGTTMTDTVAYCLDHPQWRLALQTHKIAGID

Sequences:

>Translated_215_residues
MYSVKEAFYTLQGEGARAGRASVFCRFTGCNLWSGRERDRAQSRCRFCDTDFVGTDGQNGGRFADAHALATHLHRLWPGT
DDTAATPYVVFTGGEPLLQLDTALITAMRAHGFEVAVETNGTLTPPDGIDWLCVSPKGDAPLRITQGDELKLVYPQDDAP
PANFTHLDFAHFFLQPMDLAPRGGQGTTMTDTVAYCLDHPQWRLALQTHKIAGID
>Mature_215_residues
MYSVKEAFYTLQGEGARAGRASVFCRFTGCNLWSGRERDRAQSRCRFCDTDFVGTDGQNGGRFADAHALATHLHRLWPGT
DDTAATPYVVFTGGEPLLQLDTALITAMRAHGFEVAVETNGTLTPPDGIDWLCVSPKGDAPLRITQGDELKLVYPQDDAP
PANFTHLDFAHFFLQPMDLAPRGGQGTTMTDTVAYCLDHPQWRLALQTHKIAGID

Specific function: Unknown

COG id: COG0602

COG function: function code O; Organic radical activating enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23588; Mature: 23588

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSVKEAFYTLQGEGARAGRASVFCRFTGCNLWSGRERDRAQSRCRFCDTDFVGTDGQNG
CCCHHCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
GRFADAHALATHLHRLWPGTDDTAATPYVVFTGGEPLLQLDTALITAMRAHGFEVAVETN
CEEHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCEEEEEECC
GTLTPPDGIDWLCVSPKGDAPLRITQGDELKLVYPQDDAPPANFTHLDFAHFFLQPMDLA
CEECCCCCCCEEEECCCCCCCEEEECCCCEEEEECCCCCCCCCCEEHHHHHHHHCCCCCC
PRGGQGTTMTDTVAYCLDHPQWRLALQTHKIAGID
CCCCCCCCHHHHHHHHHCCCCEEEEEEEEEEECCC
>Mature Secondary Structure
MYSVKEAFYTLQGEGARAGRASVFCRFTGCNLWSGRERDRAQSRCRFCDTDFVGTDGQNG
CCCHHCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
GRFADAHALATHLHRLWPGTDDTAATPYVVFTGGEPLLQLDTALITAMRAHGFEVAVETN
CEEHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCEEEEEECC
GTLTPPDGIDWLCVSPKGDAPLRITQGDELKLVYPQDDAPPANFTHLDFAHFFLQPMDLA
CEECCCCCCCEEEECCCCCCCEEEECCCCEEEEECCCCCCCCCCEEHHHHHHHHCCCCCC
PRGGQGTTMTDTVAYCLDHPQWRLALQTHKIAGID
CCCCCCCCHHHHHHHHHCCCCEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA