Click here to switch to the map view.

The map label for this gene is 92114103

Identifier: 92114103

GI number: 92114103

Start: 2234718

End: 2235074

Strand: Direct

Name: 92114103

Synonym: Csal_1980

Alternate gene names: NA

Gene position: 2234718-2235074 (Clockwise)

Preceding gene: 92114102

Following gene: 92114104

Centisome position: 60.45

GC content: 60.78

Gene sequence:

>357_bases
ATGCCTACAGTTTTCGCGAGTGTGGCCGATACAGGGGTTAAGCCCGCGCTGCAAGAGAGTTCAATTTTGAAAATCTCCAA
TCTACATCCGCCAACGCAGACAACTCAGAGTGAGCAAGGGGACGCCGCCCAGCGCACACGCCGTGGCGATGACACCGCGC
AAGCCAGTTCCCCGGCAAGCATCACCACGCTGAGTCAGAGCAACGAAGCCGATACCAGCCAGGATATCGATGTCGGCCGT
GTCGCCGAGATTCGCCAGGCCATCAGCGATGGCCAGCTCGAACTCGACACCGGCAAGATCGCCGACGGCTTGATCGACAG
CGTCCGCGACCTGCTGGGCGATACCGCCGAGCGCTGA

Upstream 100 bases:

>100_bases
CCTGACCGCCTCCCCAACACCCGCTATAATGCCGGCGGCACGGTCATGACCCGAGCCATGTAAAGGCAGGTTCAAGACCG
AGTGTAAAAAGATAGGGTCA

Downstream 100 bases:

>100_bases
TGCCACGGCACGTCGGATAGACGACGCTGTTTGCCCTTGGGCCGCCCCACGGGCAAACCACCATGAGAACGGGACACCAT
TATGTCGCTCGCCGAAACGC

Product: anti-sigma-28 factor FlgM

Products: NA

Alternate protein names: Anti-Sigma-28 Factor FlgM

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MPTVFASVADTGVKPALQESSILKISNLHPPTQTTQSEQGDAAQRTRRGDDTAQASSPASITTLSQSNEADTSQDIDVGR
VAEIRQAISDGQLELDTGKIADGLIDSVRDLLGDTAER

Sequences:

>Translated_118_residues
MPTVFASVADTGVKPALQESSILKISNLHPPTQTTQSEQGDAAQRTRRGDDTAQASSPASITTLSQSNEADTSQDIDVGR
VAEIRQAISDGQLELDTGKIADGLIDSVRDLLGDTAER
>Mature_117_residues
PTVFASVADTGVKPALQESSILKISNLHPPTQTTQSEQGDAAQRTRRGDDTAQASSPASITTLSQSNEADTSQDIDVGRV
AEIRQAISDGQLELDTGKIADGLIDSVRDLLGDTAER

Specific function: Unknown

COG id: COG2747

COG function: function code KNU; Negative regulator of flagellin synthesis (anti-sigma28 factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12422; Mature: 12290

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTVFASVADTGVKPALQESSILKISNLHPPTQTTQSEQGDAAQRTRRGDDTAQASSPAS
CCCCCCCHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCE
ITTLSQSNEADTSQDIDVGRVAEIRQAISDGQLELDTGKIADGLIDSVRDLLGDTAER
EEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PTVFASVADTGVKPALQESSILKISNLHPPTQTTQSEQGDAAQRTRRGDDTAQASSPAS
CCCCCCHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCE
ITTLSQSNEADTSQDIDVGRVAEIRQAISDGQLELDTGKIADGLIDSVRDLLGDTAER
EEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA