| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is yejA [C]
Identifier: 92114069
GI number: 92114069
Start: 2201512
End: 2203347
Strand: Direct
Name: yejA [C]
Synonym: Csal_1946
Alternate gene names: 92114069
Gene position: 2201512-2203347 (Clockwise)
Preceding gene: 92114068
Following gene: 92114070
Centisome position: 59.55
GC content: 64.22
Gene sequence:
>1836_bases ATGTCCCTCTTCGTTCGCGCTTTGCTTGTCATACCGGGTCTGTGGGCCCTTAGCCTGTCGGCCCTGGCCGTGCCCGCCGC CGACGTCGCCACCGTGGGCGGCATTTCGCTCTATGACAGCCCGGCGCTCCCCGACGACTTCACGCATCTGCCTTACACCA ACCCCGACGCGCCCAAGGGCGGAGAGCTGCGTCAGGCCGCGCAAGGCAGTTTCGATTCGACGAACGGCTTCATCATCCAG GGCAATCCCGCCGATGGCCTCAGTCATGTCTACGACACCTTGATGGAAGCCAGCGCCGACGAGCCCTTCACCATGTATGG CCTGCTCGCCGGCGGCATCCGCCTCGACCCCGACCGTCACTGGATGGAAATCGACCTGCGTCGGTCGGCCCGGTTCCACG ACGGCCACCCGGTAACCGCCGAGGACGTGGTGTTCAGCTTCCGCCTGCTGCGCGACCAGGGACAACCCTTCTATCGCGCC TACTATGCCGGCGTCGATCAGGTCGAAGCCCTGGACGACGATACCGTGCGCTTCGAGTTCAGCGACAACGAGTCCCGCGA GTTGCCGCTGATCCTGGGACAATTGCCGGTGCTGCCCAAGCATTACTGGCAATCGCGCGATTTCACCTCGCCGACGCTGG ACAAGCCTCTGGGCTCGGGCCCCTACGAAGTGGCCAGCATCCTTCCCGGGCGGCGTATCATGTATCGCCGTGTCGACGAT TACTGGGGGCGGAATCTGCCCATCAACCGGGGTCGCCACAACATCGACCGCCTGGTCTACGACTACTACCGGGACCAGAC CGTGGCGCTCGAGGCCTTCAAGGCAGGCAATCTCGACCTGCGCCGTGAAAGCAGTGCCAAGAACTGGGCCACCGCTTACG ACACGCCCGCCCTGGAAGCGGGCTTCATCAAGCGCATGACCGTGCCCGACGCACAGCCCGCGGGCATGCAGGCCTTCGTC ATGAACCTGCGCCGCGCCCCGTTCCAGGACCGACGCGTGCGCGAGGCCCTGACCCTGGCTACCGATTTCGACTGGCTCAA CACGCACCTGTTCTATGGCGCCTACCAGGAAACCGATAGCTACTTCGAGAGCTCGGAAATGGAGGCGCAAGGTCTGCCCA GCGACGATGAACTCGCGCTGCTCGCCCCTTATCGCGACATCCTGCCCGACGACGTCTTCGAAGAACCTCTCCCGATGTCG CGCCCCGACACGTTGCGCGCACGCTTGAAAAAGGCGCTGTCACTGCTGCGCGAGGCCGGCTACGAGGTGCGCGACGGCGT GCTCGTCGATACCGACACCGGGCGCCCCATGCGCCTGCAATTCCTGCTCTACGACACCCAGTTCGAGCGCGTCACGCTTC CCCTCATCCAGAATCTCGAGCGCCTTGGCATTCAGGCCAGCGTGCGTGTCGTCGACGTCAACCAGTACCTGACACGCCGC CGGAACTTCGATTTCGACCTGATGATCGGCAGCTTTCCGCAATCGGCCAATCCGGGCAACGAACAACGCGAGTACTGGAC GAGCGAATATGCCGATGCTCCGCGCAGCCGCAACCTGATCGGCCTGCGAAACCCGGCGGTCGACGCCCTGGTCGATCGCC TGATCGGTGCCAACAGCCGACAGGCGCTGGACACCACGGCACGCGCGCTGGACCGCGTCCTGCGCTGGGGGTTCTATGTC ATCCCCCAGTGGCATCTGGATGGCACTCGCATCGCGATGTGGGATAAATTCGGGTACCCGCAACCCTTCCCCGAGTATAC GTTCGACCTGTCGAGCTGGTGGGTCGATCCGCAACGCGCTGCCCGCGTCGAAGAACGTCAACGCGGCGAAGGTTAA
Upstream 100 bases:
>100_bases GCGGGCGCGTGCGCCACCGGCGAGGCTGGGGTAGGCTAGGCACGGCCGAAAACGGCGGCGTCGCCGCCTCGTTCGCGTCT CGCAACAAGGAACCGTCGTC
Downstream 100 bases:
>100_bases GGATTAGATCACGTGACCCATTACATCCTACGCCGCCTGCTGCTGATGATTCCTACCCTGCTGGGCATCCTGCTGCTCAA TTTCATCATCGTGCAGGTGG
Product: extracellular solute-binding protein
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 611; Mature: 610
Protein sequence:
>611_residues MSLFVRALLVIPGLWALSLSALAVPAADVATVGGISLYDSPALPDDFTHLPYTNPDAPKGGELRQAAQGSFDSTNGFIIQ GNPADGLSHVYDTLMEASADEPFTMYGLLAGGIRLDPDRHWMEIDLRRSARFHDGHPVTAEDVVFSFRLLRDQGQPFYRA YYAGVDQVEALDDDTVRFEFSDNESRELPLILGQLPVLPKHYWQSRDFTSPTLDKPLGSGPYEVASILPGRRIMYRRVDD YWGRNLPINRGRHNIDRLVYDYYRDQTVALEAFKAGNLDLRRESSAKNWATAYDTPALEAGFIKRMTVPDAQPAGMQAFV MNLRRAPFQDRRVREALTLATDFDWLNTHLFYGAYQETDSYFESSEMEAQGLPSDDELALLAPYRDILPDDVFEEPLPMS RPDTLRARLKKALSLLREAGYEVRDGVLVDTDTGRPMRLQFLLYDTQFERVTLPLIQNLERLGIQASVRVVDVNQYLTRR RNFDFDLMIGSFPQSANPGNEQREYWTSEYADAPRSRNLIGLRNPAVDALVDRLIGANSRQALDTTARALDRVLRWGFYV IPQWHLDGTRIAMWDKFGYPQPFPEYTFDLSSWWVDPQRAARVEERQRGEG
Sequences:
>Translated_611_residues MSLFVRALLVIPGLWALSLSALAVPAADVATVGGISLYDSPALPDDFTHLPYTNPDAPKGGELRQAAQGSFDSTNGFIIQ GNPADGLSHVYDTLMEASADEPFTMYGLLAGGIRLDPDRHWMEIDLRRSARFHDGHPVTAEDVVFSFRLLRDQGQPFYRA YYAGVDQVEALDDDTVRFEFSDNESRELPLILGQLPVLPKHYWQSRDFTSPTLDKPLGSGPYEVASILPGRRIMYRRVDD YWGRNLPINRGRHNIDRLVYDYYRDQTVALEAFKAGNLDLRRESSAKNWATAYDTPALEAGFIKRMTVPDAQPAGMQAFV MNLRRAPFQDRRVREALTLATDFDWLNTHLFYGAYQETDSYFESSEMEAQGLPSDDELALLAPYRDILPDDVFEEPLPMS RPDTLRARLKKALSLLREAGYEVRDGVLVDTDTGRPMRLQFLLYDTQFERVTLPLIQNLERLGIQASVRVVDVNQYLTRR RNFDFDLMIGSFPQSANPGNEQREYWTSEYADAPRSRNLIGLRNPAVDALVDRLIGANSRQALDTTARALDRVLRWGFYV IPQWHLDGTRIAMWDKFGYPQPFPEYTFDLSSWWVDPQRAARVEERQRGEG >Mature_610_residues SLFVRALLVIPGLWALSLSALAVPAADVATVGGISLYDSPALPDDFTHLPYTNPDAPKGGELRQAAQGSFDSTNGFIIQG NPADGLSHVYDTLMEASADEPFTMYGLLAGGIRLDPDRHWMEIDLRRSARFHDGHPVTAEDVVFSFRLLRDQGQPFYRAY YAGVDQVEALDDDTVRFEFSDNESRELPLILGQLPVLPKHYWQSRDFTSPTLDKPLGSGPYEVASILPGRRIMYRRVDDY WGRNLPINRGRHNIDRLVYDYYRDQTVALEAFKAGNLDLRRESSAKNWATAYDTPALEAGFIKRMTVPDAQPAGMQAFVM NLRRAPFQDRRVREALTLATDFDWLNTHLFYGAYQETDSYFESSEMEAQGLPSDDELALLAPYRDILPDDVFEEPLPMSR PDTLRARLKKALSLLREAGYEVRDGVLVDTDTGRPMRLQFLLYDTQFERVTLPLIQNLERLGIQASVRVVDVNQYLTRRR NFDFDLMIGSFPQSANPGNEQREYWTSEYADAPRSRNLIGLRNPAVDALVDRLIGANSRQALDTTARALDRVLRWGFYVI PQWHLDGTRIAMWDKFGYPQPFPEYTFDLSSWWVDPQRAARVEERQRGEG
Specific function: Possible binding-protein with either a transport or enzymatic activity [H]
COG id: COG4166
COG function: function code E; ABC-type oligopeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI87082063, Length=613, Percent_Identity=38.9885807504078, Blast_Score=430, Evalue=1e-121, Organism=Escherichia coli, GI1789966, Length=507, Percent_Identity=22.4852071005917, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 69618; Mature: 69487
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFVRALLVIPGLWALSLSALAVPAADVATVGGISLYDSPALPDDFTHLPYTNPDAPKG CHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCC GELRQAAQGSFDSTNGFIIQGNPADGLSHVYDTLMEASADEPFTMYGLLAGGIRLDPDRH CHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEHCCCEEECCCCC WMEIDLRRSARFHDGHPVTAEDVVFSFRLLRDQGQPFYRAYYAGVDQVEALDDDTVRFEF EEEEEEHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHCCCCEEEEEE SDNESRELPLILGQLPVLPKHYWQSRDFTSPTLDKPLGSGPYEVASILPGRRIMYRRVDD CCCCCCCCCEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHH YWGRNLPINRGRHNIDRLVYDYYRDQTVALEAFKAGNLDLRRESSAKNWATAYDTPALEA HCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCH GFIKRMTVPDAQPAGMQAFVMNLRRAPFQDRRVREALTLATDFDWLNTHLFYGAYQETDS HHHEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHEEECCHHHHHH YFESSEMEAQGLPSDDELALLAPYRDILPDDVFEEPLPMSRPDTLRARLKKALSLLREAG HHHCCCCCCCCCCCCCCEEEECCHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC YEVRDGVLVDTDTGRPMRLQFLLYDTQFERVTLPLIQNLERLGIQASVRVVDVNQYLTRR CCHHCCEEEECCCCCCEEEEEEEEECCCCEEEHHHHHHHHHCCCEEEEEEEEHHHHHHHH RNFDFDLMIGSFPQSANPGNEQREYWTSEYADAPRSRNLIGLRNPAVDALVDRLIGANSR CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHCCCCC QALDTTARALDRVLRWGFYVIPQWHLDGTRIAMWDKFGYPQPFPEYTFDLSSWWVDPQRA HHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEEEECCCCCCCCCCCEECHHHHCCCHHHH ARVEERQRGEG HHHHHHHCCCC >Mature Secondary Structure SLFVRALLVIPGLWALSLSALAVPAADVATVGGISLYDSPALPDDFTHLPYTNPDAPKG HHHHHHHHHHCCHHHHHHHHHHCCCHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCC GELRQAAQGSFDSTNGFIIQGNPADGLSHVYDTLMEASADEPFTMYGLLAGGIRLDPDRH CHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEHCCCEEECCCCC WMEIDLRRSARFHDGHPVTAEDVVFSFRLLRDQGQPFYRAYYAGVDQVEALDDDTVRFEF EEEEEEHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHCCCCEEEEEE SDNESRELPLILGQLPVLPKHYWQSRDFTSPTLDKPLGSGPYEVASILPGRRIMYRRVDD CCCCCCCCCEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHH YWGRNLPINRGRHNIDRLVYDYYRDQTVALEAFKAGNLDLRRESSAKNWATAYDTPALEA HCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCH GFIKRMTVPDAQPAGMQAFVMNLRRAPFQDRRVREALTLATDFDWLNTHLFYGAYQETDS HHHEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHEEECCHHHHHH YFESSEMEAQGLPSDDELALLAPYRDILPDDVFEEPLPMSRPDTLRARLKKALSLLREAG HHHCCCCCCCCCCCCCCEEEECCHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC YEVRDGVLVDTDTGRPMRLQFLLYDTQFERVTLPLIQNLERLGIQASVRVVDVNQYLTRR CCHHCCEEEECCCCCCEEEEEEEEECCCCEEEHHHHHHHHHCCCEEEEEEEEHHHHHHHH RNFDFDLMIGSFPQSANPGNEQREYWTSEYADAPRSRNLIGLRNPAVDALVDRLIGANSR CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHCCCCC QALDTTARALDRVLRWGFYVIPQWHLDGTRIAMWDKFGYPQPFPEYTFDLSSWWVDPQRA HHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEEEECCCCCCCCCCCEECHHHHCCCHHHH ARVEERQRGEG HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]