Click here to switch to the map view.

The map label for this gene is apbE [H]

Identifier: 92113699

GI number: 92113699

Start: 1794662

End: 1795714

Strand: Direct

Name: apbE [H]

Synonym: Csal_1575

Alternate gene names: 92113699

Gene position: 1794662-1795714 (Clockwise)

Preceding gene: 92113698

Following gene: 92113700

Centisome position: 48.55

GC content: 64.58

Gene sequence:

>1053_bases
ATGAAGCGGCATGCCCATCGTGCAGGGCCGGCCTGGAAAGGGCTGGTCCTGTTTGCGTTATTGGCCCTGGTCGGATGCGA
CCGTTCGCCCGAAGCGCATCGCTTCGAAGGCCCCATTTTCGGCACGGGCTACCATGTCACGGTGTATGGCGACTTCAGCG
ACCGTCAACTGGCGTCGCTGAAGGACGGCATCGACGATGCGCTCGAAGACGTCGACCGGCTGATGTCCACCTACAAGCCG
GAGTCGGAGTTGTCGCGCTTCAATGCCGCGCCGGTGGGGGAGCCGTTCGCGCTGTCTCCGCCCACGGCGCAGGTGATCGA
CGAGGCCATCGAGATCGGCGAACTCTCGAATGGCGCCTTCGACGTGACCGTCGGCGCTGCGGTGAATCTCTGGGGCTTCG
GGCCGGACAAGCGTCCGGACGAGATCCCCAGCGACGCGGAAATCGCCGAGGCGCTGGAGGAGGTCGATTTCCGGGCGTTG
CATCTGAACGGCAACCGGCTGACCAAGACCAAGCCGGTATACGTCGACCTCTCCGGCATCGCCAAGGGATATGGCGTCGA
TCACGTGGCGGCGCGACTGGATGCCCTGGGCGTGACGTCCTATCTCGTCGAGGTGGGCGGTGAAATCCGCACGCGCGGTA
CCAAGCCCGGTGGCGAGCCCTGGCGGGTGGCGGTCGAGAAGCCGGTCTCCCGTGAGCGCAGCGTGCAGCGAGTGCTCGAG
CTCGAGGATGTCGCCGTCGCGACGTCGGGCGACTATCGTAATTATTACGAGGAAGACGGCCGGCGTTATTCGCATACCAT
CGATCCGCGCACCGGTCGCCCGATCACGCATCACCTCGCGTCGGTGACCGTCGTGGCGGAGCAGTGCTCCACGGCGGATG
GCCTGGCCACGGCGCTGGAGGTGCTGGGGCCGAAGAAGGGCATGGCCCTGGCCAACCGTGAGGATATTGCGGCGTATTTC
ATCGTCAAAACCGATGAGGGCTTCACGACCGAACTCAGCGATGCGTTTCATGCCTATCTGGCAGAGCCGCCATCCGAAGG
AGGTGAGCAATGA

Upstream 100 bases:

>100_bases
ACTACATGTGCGGTCCGCCCATCATGAATGCCTCGGTCATCAAGATGCTGACCGACATGGGGGTCGAGCCCGAGAACATC
ATGCTGGACGACTTCGGCGG

Downstream 100 bases:

>100_bases
CTATATGGATTCTGGTATTCGCGTTGATGCTGCTGCTGCTGGCCGGCATGGCCATCGGCGTCATCCTCGGGCGCAAGCCC
ATCGCCGGTTCCTGCGGCGG

Product: ApbE-like lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MKRHAHRAGPAWKGLVLFALLALVGCDRSPEAHRFEGPIFGTGYHVTVYGDFSDRQLASLKDGIDDALEDVDRLMSTYKP
ESELSRFNAAPVGEPFALSPPTAQVIDEAIEIGELSNGAFDVTVGAAVNLWGFGPDKRPDEIPSDAEIAEALEEVDFRAL
HLNGNRLTKTKPVYVDLSGIAKGYGVDHVAARLDALGVTSYLVEVGGEIRTRGTKPGGEPWRVAVEKPVSRERSVQRVLE
LEDVAVATSGDYRNYYEEDGRRYSHTIDPRTGRPITHHLASVTVVAEQCSTADGLATALEVLGPKKGMALANREDIAAYF
IVKTDEGFTTELSDAFHAYLAEPPSEGGEQ

Sequences:

>Translated_350_residues
MKRHAHRAGPAWKGLVLFALLALVGCDRSPEAHRFEGPIFGTGYHVTVYGDFSDRQLASLKDGIDDALEDVDRLMSTYKP
ESELSRFNAAPVGEPFALSPPTAQVIDEAIEIGELSNGAFDVTVGAAVNLWGFGPDKRPDEIPSDAEIAEALEEVDFRAL
HLNGNRLTKTKPVYVDLSGIAKGYGVDHVAARLDALGVTSYLVEVGGEIRTRGTKPGGEPWRVAVEKPVSRERSVQRVLE
LEDVAVATSGDYRNYYEEDGRRYSHTIDPRTGRPITHHLASVTVVAEQCSTADGLATALEVLGPKKGMALANREDIAAYF
IVKTDEGFTTELSDAFHAYLAEPPSEGGEQ
>Mature_350_residues
MKRHAHRAGPAWKGLVLFALLALVGCDRSPEAHRFEGPIFGTGYHVTVYGDFSDRQLASLKDGIDDALEDVDRLMSTYKP
ESELSRFNAAPVGEPFALSPPTAQVIDEAIEIGELSNGAFDVTVGAAVNLWGFGPDKRPDEIPSDAEIAEALEEVDFRAL
HLNGNRLTKTKPVYVDLSGIAKGYGVDHVAARLDALGVTSYLVEVGGEIRTRGTKPGGEPWRVAVEKPVSRERSVQRVLE
LEDVAVATSGDYRNYYEEDGRRYSHTIDPRTGRPITHHLASVTVVAEQCSTADGLATALEVLGPKKGMALANREDIAAYF
IVKTDEGFTTELSDAFHAYLAEPPSEGGEQ

Specific function: Involved in the conversion of aminoimidazole ribotide (AIR), a purine intermediate, to the 4-amino-5-hydroxymethyl-2- methyl pyrimidine (HMP) moiety of thiamine [H]

COG id: COG1477

COG function: function code H; Membrane-associated lipoprotein involved in thiamine biosynthesis

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ApbE family [H]

Homologues:

Organism=Escherichia coli, GI1788543, Length=338, Percent_Identity=40.8284023668639, Blast_Score=260, Evalue=1e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003374 [H]

Pfam domain/function: PF02424 ApbE [H]

EC number: NA

Molecular weight: Translated: 37964; Mature: 37964

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRHAHRAGPAWKGLVLFALLALVGCDRSPEAHRFEGPIFGTGYHVTVYGDFSDRQLASL
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCEEEEEEECCCCCHHHHH
KDGIDDALEDVDRLMSTYKPESELSRFNAAPVGEPFALSPPTAQVIDEAIEIGELSNGAF
HHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEE
DVTVGAAVNLWGFGPDKRPDEIPSDAEIAEALEEVDFRALHLNGNRLTKTKPVYVDLSGI
EEEECCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCEEECCCCEEEEHHHH
AKGYGVDHVAARLDALGVTSYLVEVGGEIRTRGTKPGGEPWRVAVEKPVSRERSVQRVLE
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEEECCCCHHHHHHHHHHH
LEDVAVATSGDYRNYYEEDGRRYSHTIDPRTGRPITHHLASVTVVAEQCSTADGLATALE
HHHHEEECCCCHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH
VLGPKKGMALANREDIAAYFIVKTDEGFTTELSDAFHAYLAEPPSEGGEQ
HHCCCCCCEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKRHAHRAGPAWKGLVLFALLALVGCDRSPEAHRFEGPIFGTGYHVTVYGDFSDRQLASL
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCEEEEEEECCCCCHHHHH
KDGIDDALEDVDRLMSTYKPESELSRFNAAPVGEPFALSPPTAQVIDEAIEIGELSNGAF
HHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEE
DVTVGAAVNLWGFGPDKRPDEIPSDAEIAEALEEVDFRALHLNGNRLTKTKPVYVDLSGI
EEEECCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCEEECCCCEEEEHHHH
AKGYGVDHVAARLDALGVTSYLVEVGGEIRTRGTKPGGEPWRVAVEKPVSRERSVQRVLE
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEEECCCCHHHHHHHHHHH
LEDVAVATSGDYRNYYEEDGRRYSHTIDPRTGRPITHHLASVTVVAEQCSTADGLATALE
HHHHEEECCCCHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH
VLGPKKGMALANREDIAAYFIVKTDEGFTTELSDAFHAYLAEPPSEGGEQ
HHCCCCCCEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]