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The map label for this gene is glpG [H]

Identifier: 92113435

GI number: 92113435

Start: 1493121

End: 1493978

Strand: Direct

Name: glpG [H]

Synonym: Csal_1309

Alternate gene names: 92113435

Gene position: 1493121-1493978 (Clockwise)

Preceding gene: 92113434

Following gene: 92113436

Centisome position: 40.39

GC content: 65.5

Gene sequence:

>858_bases
ATGTACAAGTTGCTGGAACTGCCTCGCCAACAGGACATCGTCGCACTGCGCCGCGCGCTGTGGGCGCACCGCATTGGTCA
TCAGGTGACCGAGGAGGAGACGGTGCAGGTGGTGTGGCTGGCCGATCCGCGCCAGCGTGACGACGCCGCGCGCCTGATCG
AGCAATGGCACCGCGGCGCATTGTCCGAGCGTCCAGCGTCACCCCCCAAGCGTCCCTCGACAAGCCTGTTCGGCAGTGCC
TTTTCACAGGCTCCGCTGGCGGCGGCCTGCGTCGCGCTGTGTCTCGCGGTGTTTGCTTTGATGGCGCTGTTCGGCGATCG
GGTGGTGGCCGCACTGACCTTCGTGCCGGTGGAGCCCTCGCAGGGACGCTTGATGGTGGGCACGCTGGGTGACGTGGTCG
CCAGCGGTCAGCTGTGGCGCCTGCTGTCGCCGACCGTCATGCATTTCGGCTGGATGCATCTGGTGTTCAACATGCTGTGG
CTGTGGTATTTCGGACGCCAGGTCGAAGCGTTGCAAGGGCCGCTGCGGCTTGCGGCGATCGTCGTCGTGGCGGCGCTGGC
CTCCAATCTGGCGCAGTATGCCACGGGCACGGTGCTGTTCGGTGGCATGTCCGGCGTCGATTATGCCCTGCTGGGCTATG
TCTGGCTGATGGCCCGACGGGCGCCTGCCAGTGGATTCTTCGTGCCGCAAATGCTTGTGGTGTTCATGCTGGCCTGGATG
GTATTCACCATGACCGACATGGCGGGGCTGTTCGGGTTCGGCAACGTTGCCAACGAGGCGCATCTCGGCGGTTTGCTGGT
GGGGCTGGCCTGGGGCTGGTGGGCCGGTGGACGTGCCGCGAAAGGAGACGGAACATGA

Upstream 100 bases:

>100_bases
GGTGTTCCCTTGAATGATCCCTTGCTCTTGTCCGGCGGCCCCCTCCGCCGGACTTTTTCTTGTTGGGCGCATGCCATGCG
TCATGAAAGGGAATCCCTTT

Downstream 100 bases:

>100_bases
GTGATATGACCTTCGACAAGATGGTGGCGCAGATGACGCCGGCCATGTACGACAGTTTCAAGCAGGCGATCGCGTTGCGG
AAATGGCCGGACGGCAGACG

Product: rhomboid-like protein

Products: NA

Alternate protein names: Intramembrane serine protease [H]

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MYKLLELPRQQDIVALRRALWAHRIGHQVTEEETVQVVWLADPRQRDDAARLIEQWHRGALSERPASPPKRPSTSLFGSA
FSQAPLAAACVALCLAVFALMALFGDRVVAALTFVPVEPSQGRLMVGTLGDVVASGQLWRLLSPTVMHFGWMHLVFNMLW
LWYFGRQVEALQGPLRLAAIVVVAALASNLAQYATGTVLFGGMSGVDYALLGYVWLMARRAPASGFFVPQMLVVFMLAWM
VFTMTDMAGLFGFGNVANEAHLGGLLVGLAWGWWAGGRAAKGDGT

Sequences:

>Translated_285_residues
MYKLLELPRQQDIVALRRALWAHRIGHQVTEEETVQVVWLADPRQRDDAARLIEQWHRGALSERPASPPKRPSTSLFGSA
FSQAPLAAACVALCLAVFALMALFGDRVVAALTFVPVEPSQGRLMVGTLGDVVASGQLWRLLSPTVMHFGWMHLVFNMLW
LWYFGRQVEALQGPLRLAAIVVVAALASNLAQYATGTVLFGGMSGVDYALLGYVWLMARRAPASGFFVPQMLVVFMLAWM
VFTMTDMAGLFGFGNVANEAHLGGLLVGLAWGWWAGGRAAKGDGT
>Mature_285_residues
MYKLLELPRQQDIVALRRALWAHRIGHQVTEEETVQVVWLADPRQRDDAARLIEQWHRGALSERPASPPKRPSTSLFGSA
FSQAPLAAACVALCLAVFALMALFGDRVVAALTFVPVEPSQGRLMVGTLGDVVASGQLWRLLSPTVMHFGWMHLVFNMLW
LWYFGRQVEALQGPLRLAAIVVVAALASNLAQYATGTVLFGGMSGVDYALLGYVWLMARRAPASGFFVPQMLVVFMLAWM
VFTMTDMAGLFGFGNVANEAHLGGLLVGLAWGWWAGGRAAKGDGT

Specific function: Rhomboid-type serine protease that catalyzes intramembrane proteolysis [H]

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S54 family [H]

Homologues:

Organism=Escherichia coli, GI48994938, Length=255, Percent_Identity=32.5490196078431, Blast_Score=118, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022732
- InterPro:   IPR002610
- InterPro:   IPR022764 [H]

Pfam domain/function: PF12122 DUF3582; PF01694 Rhomboid [H]

EC number: =3.4.21.105 [H]

Molecular weight: Translated: 31128; Mature: 31128

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKLLELPRQQDIVALRRALWAHRIGHQVTEEETVQVVWLADPRQRDDAARLIEQWHRGA
CCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCC
LSERPASPPKRPSTSLFGSAFSQAPLAAACVALCLAVFALMALFGDRVVAALTFVPVEPS
CCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC
QGRLMVGTLGDVVASGQLWRLLSPTVMHFGWMHLVFNMLWLWYFGRQVEALQGPLRLAAI
CCEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVVAALASNLAQYATGTVLFGGMSGVDYALLGYVWLMARRAPASGFFVPQMLVVFMLAWM
HHHHHHHHHHHHHHCCHHEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
VFTMTDMAGLFGFGNVANEAHLGGLLVGLAWGWWAGGRAAKGDGT
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MYKLLELPRQQDIVALRRALWAHRIGHQVTEEETVQVVWLADPRQRDDAARLIEQWHRGA
CCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCC
LSERPASPPKRPSTSLFGSAFSQAPLAAACVALCLAVFALMALFGDRVVAALTFVPVEPS
CCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC
QGRLMVGTLGDVVASGQLWRLLSPTVMHFGWMHLVFNMLWLWYFGRQVEALQGPLRLAAI
CCEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVVAALASNLAQYATGTVLFGGMSGVDYALLGYVWLMARRAPASGFFVPQMLVVFMLAWM
HHHHHHHHHHHHHHCCHHEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
VFTMTDMAGLFGFGNVANEAHLGGLLVGLAWGWWAGGRAAKGDGT
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA