Click here to switch to the map view.

The map label for this gene is yqcC [C]

Identifier: 92113369

GI number: 92113369

Start: 1421113

End: 1421439

Strand: Direct

Name: yqcC [C]

Synonym: Csal_1243

Alternate gene names: 92113369

Gene position: 1421113-1421439 (Clockwise)

Preceding gene: 92113364

Following gene: 92113371

Centisome position: 38.44

GC content: 67.28

Gene sequence:

>327_bases
ATGACGTCGCATGAAGCCTTGATGGAGGCACTGGAGCGCCTGGTCGCGACCTTGCGCAGCGTCGACATGTGGCGCGTGGA
GGAGCCGCCTGCGGCGGCGTTCGACAGCCAGCAGCCGTTCTGCGTGGATACCATGGAACTGCCGCAGTGGTTGCGCTATG
TCTTCGTGGCGCGGCTTGAAACGCTGGCCGAGACCGAGGCGCCCTTGCCGGCTACCTGCAGCGTCGCACCGGCGATCGAT
ACCTGGCTGAAGGAGGCCTCGCCCAGTGTGCGGCGGGTGGTCACCGAGGCGGTGGCCGAGGTGGATCGCATCGTGACCGA
GGCGTGA

Upstream 100 bases:

>100_bases
AAAGGAAGACCCAGCAGGAGCCGACTAGAAAGGCAAGGTGGTCAACCCCCCGTGCGAAGCGCGACAATGGTGGCCGGGAT
GTTTCACTTCAGGAGATGAG

Downstream 100 bases:

>100_bases
CGCAGGCTTTCCCTGATGCCTGCCTCTCATACGACAACGCCGGGCCCTGAGGGCCCGGCGTTGTCGCGTTCACGTAGGGT
CTTGCCTTAGAAGCGGAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MTSHEALMEALERLVATLRSVDMWRVEEPPAAAFDSQQPFCVDTMELPQWLRYVFVARLETLAETEAPLPATCSVAPAID
TWLKEASPSVRRVVTEAVAEVDRIVTEA

Sequences:

>Translated_108_residues
MTSHEALMEALERLVATLRSVDMWRVEEPPAAAFDSQQPFCVDTMELPQWLRYVFVARLETLAETEAPLPATCSVAPAID
TWLKEASPSVRRVVTEAVAEVDRIVTEA
>Mature_107_residues
TSHEALMEALERLVATLRSVDMWRVEEPPAAAFDSQQPFCVDTMELPQWLRYVFVARLETLAETEAPLPATCSVAPAIDT
WLKEASPSVRRVVTEAVAEVDRIVTEA

Specific function: Unknown

COG id: COG3098

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqcC [H]

Homologues:

Organism=Escherichia coli, GI1789156, Length=96, Percent_Identity=36.4583333333333, Blast_Score=62, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007384 [H]

Pfam domain/function: PF04287 DUF446 [H]

EC number: NA

Molecular weight: Translated: 12059; Mature: 11928

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSHEALMEALERLVATLRSVDMWRVEEPPAAAFDSQQPFCVDTMELPQWLRYVFVARLE
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
TLAETEAPLPATCSVAPAIDTWLKEASPSVRRVVTEAVAEVDRIVTEA
HHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TSHEALMEALERLVATLRSVDMWRVEEPPAAAFDSQQPFCVDTMELPQWLRYVFVARLE
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
TLAETEAPLPATCSVAPAIDTWLKEASPSVRRVVTEAVAEVDRIVTEA
HHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]