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The map label for this gene is paiB [H]

Identifier: 92113282

GI number: 92113282

Start: 1322437

End: 1323093

Strand: Direct

Name: paiB [H]

Synonym: Csal_1155

Alternate gene names: 92113282

Gene position: 1322437-1323093 (Clockwise)

Preceding gene: 92113281

Following gene: 92113284

Centisome position: 35.77

GC content: 65.3

Gene sequence:

>657_bases
ATGTATCAGCCGCCCCAGTTCCACATCGACAGTCGCGCCGAATGTCATCGGGCCATCGAGGAGGCGCCTTTCGCCACGCT
GGTGACCCGTGATGCCTCCGGCGAGCTGTGTGCCGATCACTTGCCGCTGTTGCTGACACCGGCGGGAGGCGAGTGGCCAT
CGGATACCTTGCGTGGCCATATCGCCCGTGCCAATCCGCTTGCCGGGAGGGGCGAAAGCTCCCTGGAGGGCATCGAGGCC
CTGGCGATCTTTCATGGGCCTCAGGCCTACATCACGCCGAGCTGGTATCCGGCCAAGCGTGAGCACGGCAAGGTGGTGCC
GACCTGGAACTATCAGGTGGTGCACGCGCATGGCCGGCTGCGCCTGATCGACGATCCACGCTGGCTGCGCGAGATGGTGA
CCGCGCTCACCGAGCGCTTCGAAGGCGAGCGGCAGAGGCCCTGGCGGGTCGAGGATGCCCCCGACGAGTACATCGCCGCG
ATGTGCCGCGCCATCGTCGGGATCGAGATCACCGTCGACCGCCTCGAAGGCAAGCTCAAGGCGAGCCAGCACAAGCCGCT
CGATGAACGCCGAGCCATTCATCAGGGGTTGCAAGATGAATATGGCTACGGGGAGCAAGAGGCCGCCTGCCTTGGCGGTG
TCACACCCGAGGATTGA

Upstream 100 bases:

>100_bases
GCCCCCGAGAACTTCGATGCCACGGGCCGCCAGCATCGTTCTCTCACGTCGATGACGGCCGCCCTGCGTCACGATCCTTT
TCCCTCCTGAGAGTCGAACC

Downstream 100 bases:

>100_bases
GCGTCGGTATGGCGGCGTCGTCAACGCCTAGACGATATCCAGGGGCGGCTTGCGCGACGGCGCGGGGAAGGCGGCGTCCA
GCCGTGCGAGACTGGCGTCG

Product: negative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MYQPPQFHIDSRAECHRAIEEAPFATLVTRDASGELCADHLPLLLTPAGGEWPSDTLRGHIARANPLAGRGESSLEGIEA
LAIFHGPQAYITPSWYPAKREHGKVVPTWNYQVVHAHGRLRLIDDPRWLREMVTALTERFEGERQRPWRVEDAPDEYIAA
MCRAIVGIEITVDRLEGKLKASQHKPLDERRAIHQGLQDEYGYGEQEAACLGGVTPED

Sequences:

>Translated_218_residues
MYQPPQFHIDSRAECHRAIEEAPFATLVTRDASGELCADHLPLLLTPAGGEWPSDTLRGHIARANPLAGRGESSLEGIEA
LAIFHGPQAYITPSWYPAKREHGKVVPTWNYQVVHAHGRLRLIDDPRWLREMVTALTERFEGERQRPWRVEDAPDEYIAA
MCRAIVGIEITVDRLEGKLKASQHKPLDERRAIHQGLQDEYGYGEQEAACLGGVTPED
>Mature_218_residues
MYQPPQFHIDSRAECHRAIEEAPFATLVTRDASGELCADHLPLLLTPAGGEWPSDTLRGHIARANPLAGRGESSLEGIEA
LAIFHGPQAYITPSWYPAKREHGKVVPTWNYQVVHAHGRLRLIDDPRWLREMVTALTERFEGERQRPWRVEDAPDEYIAA
MCRAIVGIEITVDRLEGKLKASQHKPLDERRAIHQGLQDEYGYGEQEAACLGGVTPED

Specific function: Involved in the reduction of extracellular and cell- associated protease levels, as well as in the reduced levels of alpha-amylase, levansucrase, alkaline phosphatase and sporulation inhibition, when present in high copy number [H]

COG id: COG2808

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the paiB family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322780, Length=164, Percent_Identity=29.8780487804878, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007396
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF04299 FMN_bind_2 [H]

EC number: NA

Molecular weight: Translated: 24476; Mature: 24476

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQPPQFHIDSRAECHRAIEEAPFATLVTRDASGELCADHLPLLLTPAGGEWPSDTLRGH
CCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHCCCCEEEECCCCCCCCHHHHCC
IARANPLAGRGESSLEGIEALAIFHGPQAYITPSWYPAKREHGKVVPTWNYQVVHAHGRL
CCCCCCCCCCCCCHHHHHHEEEEEECCCEEECCCCCCCCCCCCCEECCCCEEEEEECCEE
RLIDDPRWLREMVTALTERFEGERQRPWRVEDAPDEYIAAMCRAIVGIEITVDRLEGKLK
EEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEHHCCHHH
ASQHKPLDERRAIHQGLQDEYGYGEQEAACLGGVTPED
HCCCCCCHHHHHHHHCCHHHCCCCCCHHHHHCCCCCCC
>Mature Secondary Structure
MYQPPQFHIDSRAECHRAIEEAPFATLVTRDASGELCADHLPLLLTPAGGEWPSDTLRGH
CCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHCCCCEEEECCCCCCCCHHHHCC
IARANPLAGRGESSLEGIEALAIFHGPQAYITPSWYPAKREHGKVVPTWNYQVVHAHGRL
CCCCCCCCCCCCCHHHHHHEEEEEECCCEEECCCCCCCCCCCCCEECCCCEEEEEECCEE
RLIDDPRWLREMVTALTERFEGERQRPWRVEDAPDEYIAAMCRAIVGIEITVDRLEGKLK
EEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEHHCCHHH
ASQHKPLDERRAIHQGLQDEYGYGEQEAACLGGVTPED
HCCCCCCHHHHHHHHCCHHHCCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2108124; 9384377 [H]