| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is ilvD [H]
Identifier: 92113269
GI number: 92113269
Start: 1304155
End: 1305900
Strand: Direct
Name: ilvD [H]
Synonym: Csal_1142
Alternate gene names: 92113269
Gene position: 1304155-1305900 (Clockwise)
Preceding gene: 92113266
Following gene: 92113272
Centisome position: 35.28
GC content: 65.64
Gene sequence:
>1746_bases ATGACCCATAAAAAGCGCCCGCTACGCTCGGCCGAATGGTTCGGCAACGATGACAAGAACGGCTTCATGTACCGCAGCTG GATGAAGAACCAGGGCATTCCCGATCATGAGTTTCGCGGCAAGCCGATCATCGGTATCTGCAACACCTTCTCCGAGCTGA CACCGTGCAACGCCCATTTCCGCAAGCTGGCCGAGCACGTCAAGAAGGGGGTGCTCGAAGCCGGCGGCTATCCGGTGGAG TTTCCGGTCTTCTCCAATGGCGAGTCCAATCTGCGTCCCACCGCGATGTTCACGCGCAACCTGGCGAGCATGGATGTCGA GGAAGCCATCCGCGGAAACCCGCTCGACGCCGTGGTGTTGCTGGTGGGGTGCGACAAGACCACGCCGGCTCTGCTGATGG GCGCGGCAAGCTGCGATATCCCCACCATCGTGGTCACCGGCGGTCCGATGCTCAACGGCAAGCACAAGGGGCGTGACATC GGCTCGGGCACGGTCGTCTGGCAGCTCTCCGAGGAGGTCAAGGCCGGCAAGATATCGCTGCATGACTTCATGGCCGCCGA GGCCGGCATGTCGCGCTCCGCCGGCACCTGCAACACCATGGGGACGGCCTCGACCATGGCCTGCATGGCCGAGTCGCTGG GCACCTCGCTGCCGCACAATGCCGCGATTCCTGCCGTCGACTCGCGCCGTTACGTACTGGCGCACCTGTCCGGCAATCGC ATCGTCGAGATGGTCGACGAGGACCTCACCCTGTCCAAGGTGCTCACCAAGTCCGCATTCGAGAATGCCATTCGCACCAA TGCCGCCATCGGCGGTTCGACCAACGCGGTGATTCACCTCCAGGCCATCGCGGGGCGCATGGGGGTCGATCTCACGCTCG ACGACTGGACCCGGGTGGGACGCGGCACCCCGACCATCGTCGATCTGCAGCCCTCCGGCCGTTATCTGATGGAGGAGTTC TATTACGCCGGCGGCCTGCCCGCCGTGCTGCGCCGTCTCGGCGAGGCCGACCGGCTGCCCCACAAGGACGCGCTGACCGT CAACGGCAAGACGCTGTGGGAAAACGTCCAGGACGCGCCGCTCTACAACGATGCCGTGATTCTGCCGCTGGATGCGCCGC TTCGCGAGGATGGCGGAATGTGCGTGATGCGCGGCAATCTCGCGCCCAACGGGGCGGTGCTCAAGCCCTCTGCCGCGACC CCGGCGCTGATGCAGCACCGTGGGCGTGCGGTCGTCTTCGAGAACTTCGACGATTACAAGGCGCGTATCAACGACCCGGA TCTCGACGTCACCGCCGACGACATTCTGGTGATGAAGAACTGCGGGCCGCGCGGTTACCACGGCATGGCCGAAGTCGGCA ACATGGGGCTGCCCGCCAAGCTGCTCGAGCAAGGCGTCACCGACATGGTGCGGATCTCCGATGCGCGCATGAGCGGCACG GCGTATGGCACCGTGGTACTCCACGTGGCGCCGGAAGCCGCGGCGGGCGGGCCGCTGGCCGCGGTTCGCAACGGCGACTG GATCGCGCTCGACGCCTATTCCGGCAAGTTGCACCTGGAGGTCGACGACGCCGAGATCGCCTCACGGCTGGCCGAGGCGG ACCCCACCGCCGAGTCGACGCGCATCGCCAGCACCGGCGGATATCGCCAGCTCTACATCGAGCACGTGCTGCAGGCCGAC CAGGGCTGCGATTTCGACTTCCTGGTGGGATGTCGCGGCGCGGAAGTCCCCCGTCACTCGCACTGA
Upstream 100 bases:
>100_bases TTGGTATATCGGTTTCGGTGTTTTTTGACATTATCAGGTTATTGAAAGAGGCGTTTATGGTGACGGCAACGCTGATGCGA CCGTGACTGGAGGAAGACGC
Downstream 100 bases:
>100_bases GCCGAGTGGCACGGACAGAGCAAGAGGGCGGCCGATCGGTCGCCCTCTTTGCGTATGAGGCAAGAAGACCGGGGCGTGAC GAGGCGTCTACGCCTGTTGG
Product: dihydroxy-acid dehydratase
Products: NA
Alternate protein names: DAD [H]
Number of amino acids: Translated: 581; Mature: 580
Protein sequence:
>581_residues MTHKKRPLRSAEWFGNDDKNGFMYRSWMKNQGIPDHEFRGKPIIGICNTFSELTPCNAHFRKLAEHVKKGVLEAGGYPVE FPVFSNGESNLRPTAMFTRNLASMDVEEAIRGNPLDAVVLLVGCDKTTPALLMGAASCDIPTIVVTGGPMLNGKHKGRDI GSGTVVWQLSEEVKAGKISLHDFMAAEAGMSRSAGTCNTMGTASTMACMAESLGTSLPHNAAIPAVDSRRYVLAHLSGNR IVEMVDEDLTLSKVLTKSAFENAIRTNAAIGGSTNAVIHLQAIAGRMGVDLTLDDWTRVGRGTPTIVDLQPSGRYLMEEF YYAGGLPAVLRRLGEADRLPHKDALTVNGKTLWENVQDAPLYNDAVILPLDAPLREDGGMCVMRGNLAPNGAVLKPSAAT PALMQHRGRAVVFENFDDYKARINDPDLDVTADDILVMKNCGPRGYHGMAEVGNMGLPAKLLEQGVTDMVRISDARMSGT AYGTVVLHVAPEAAAGGPLAAVRNGDWIALDAYSGKLHLEVDDAEIASRLAEADPTAESTRIASTGGYRQLYIEHVLQAD QGCDFDFLVGCRGAEVPRHSH
Sequences:
>Translated_581_residues MTHKKRPLRSAEWFGNDDKNGFMYRSWMKNQGIPDHEFRGKPIIGICNTFSELTPCNAHFRKLAEHVKKGVLEAGGYPVE FPVFSNGESNLRPTAMFTRNLASMDVEEAIRGNPLDAVVLLVGCDKTTPALLMGAASCDIPTIVVTGGPMLNGKHKGRDI GSGTVVWQLSEEVKAGKISLHDFMAAEAGMSRSAGTCNTMGTASTMACMAESLGTSLPHNAAIPAVDSRRYVLAHLSGNR IVEMVDEDLTLSKVLTKSAFENAIRTNAAIGGSTNAVIHLQAIAGRMGVDLTLDDWTRVGRGTPTIVDLQPSGRYLMEEF YYAGGLPAVLRRLGEADRLPHKDALTVNGKTLWENVQDAPLYNDAVILPLDAPLREDGGMCVMRGNLAPNGAVLKPSAAT PALMQHRGRAVVFENFDDYKARINDPDLDVTADDILVMKNCGPRGYHGMAEVGNMGLPAKLLEQGVTDMVRISDARMSGT AYGTVVLHVAPEAAAGGPLAAVRNGDWIALDAYSGKLHLEVDDAEIASRLAEADPTAESTRIASTGGYRQLYIEHVLQAD QGCDFDFLVGCRGAEVPRHSH >Mature_580_residues THKKRPLRSAEWFGNDDKNGFMYRSWMKNQGIPDHEFRGKPIIGICNTFSELTPCNAHFRKLAEHVKKGVLEAGGYPVEF PVFSNGESNLRPTAMFTRNLASMDVEEAIRGNPLDAVVLLVGCDKTTPALLMGAASCDIPTIVVTGGPMLNGKHKGRDIG SGTVVWQLSEEVKAGKISLHDFMAAEAGMSRSAGTCNTMGTASTMACMAESLGTSLPHNAAIPAVDSRRYVLAHLSGNRI VEMVDEDLTLSKVLTKSAFENAIRTNAAIGGSTNAVIHLQAIAGRMGVDLTLDDWTRVGRGTPTIVDLQPSGRYLMEEFY YAGGLPAVLRRLGEADRLPHKDALTVNGKTLWENVQDAPLYNDAVILPLDAPLREDGGMCVMRGNLAPNGAVLKPSAATP ALMQHRGRAVVFENFDDYKARINDPDLDVTADDILVMKNCGPRGYHGMAEVGNMGLPAKLLEQGVTDMVRISDARMSGTA YGTVVLHVAPEAAAGGPLAAVRNGDWIALDAYSGKLHLEVDDAEIASRLAEADPTAESTRIASTGGYRQLYIEHVLQADQ GCDFDFLVGCRGAEVPRHSH
Specific function: Valine and isoleucine biosynthesis; fourth step. [C]
COG id: COG0129
COG function: function code EG; Dihydroxyacid dehydratase/phosphogluconate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ilvD/edd family [H]
Homologues:
Organism=Escherichia coli, GI48994964, Length=567, Percent_Identity=31.7460317460317, Blast_Score=239, Evalue=5e-64, Organism=Escherichia coli, GI2367371, Length=486, Percent_Identity=34.156378600823, Blast_Score=192, Evalue=6e-50, Organism=Escherichia coli, GI1788157, Length=553, Percent_Identity=28.9330922242315, Blast_Score=175, Evalue=6e-45, Organism=Escherichia coli, GI1786464, Length=445, Percent_Identity=32.8089887640449, Blast_Score=174, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6322476, Length=553, Percent_Identity=31.4647377938517, Blast_Score=243, Evalue=7e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015928 - InterPro: IPR004404 - InterPro: IPR000581 - InterPro: IPR020558 [H]
Pfam domain/function: PF00920 ILVD_EDD [H]
EC number: =4.2.1.9 [H]
Molecular weight: Translated: 62494; Mature: 62363
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: PS00886 ILVD_EDD_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHKKRPLRSAEWFGNDDKNGFMYRSWMKNQGIPDHEFRGKPIIGICNTFSELTPCNAHF CCCCCCCCCCHHCCCCCCCCCCEEEHHHHCCCCCCCCCCCCCEEEECHHHHHCCCCHHHH RKLAEHVKKGVLEAGGYPVEFPVFSNGESNLRPTAMFTRNLASMDVEEAIRGNPLDAVVL HHHHHHHHHHHHHCCCCEEEECEECCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCCEEEE LVGCDKTTPALLMGAASCDIPTIVVTGGPMLNGKHKGRDIGSGTVVWQLSEEVKAGKISL EEECCCCCHHHEEECCCCCCCEEEEECCCEECCCCCCCCCCCCEEEEEECCCCCCCEEEH HDFMAAEAGMSRSAGTCNTMGTASTMACMAESLGTSLPHNAAIPAVDSRRYVLAHLSGNR HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCE IVEMVDEDLTLSKVLTKSAFENAIRTNAAIGGSTNAVIHLQAIAGRMGVDLTLDDWTRVG EEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEEHHHHHHHC RGTPTIVDLQPSGRYLMEEFYYAGGLPAVLRRLGEADRLPHKDALTVNGKTLWENVQDAP CCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHCHHHCCCCCCEEEECCHHHHCCCCCCC LYNDAVILPLDAPLREDGGMCVMRGNLAPNGAVLKPSAATPALMQHRGRAVVFENFDDYK CCCCEEEEECCCCCCCCCCEEEEECCCCCCCCEECCCCCCHHHHHCCCCEEEEECCCCHH ARINDPDLDVTADDILVMKNCGPRGYHGMAEVGNMGLPAKLLEQGVTDMVRISDARMSGT HCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCCCCHHHHHCCCHHHEEECCCCCCCC AYGTVVLHVAPEAAAGGPLAAVRNGDWIALDAYSGKLHLEVDDAEIASRLAEADPTAEST EEEEEEEEECCCCCCCCCEEEEECCCEEEEEECCCEEEEEECHHHHHHHHHHCCCCCCCC RIASTGGYRQLYIEHVLQADQGCDFDFLVGCRGAEVPRHSH EEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure THKKRPLRSAEWFGNDDKNGFMYRSWMKNQGIPDHEFRGKPIIGICNTFSELTPCNAHF CCCCCCCCCHHCCCCCCCCCCEEEHHHHCCCCCCCCCCCCCEEEECHHHHHCCCCHHHH RKLAEHVKKGVLEAGGYPVEFPVFSNGESNLRPTAMFTRNLASMDVEEAIRGNPLDAVVL HHHHHHHHHHHHHCCCCEEEECEECCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCCEEEE LVGCDKTTPALLMGAASCDIPTIVVTGGPMLNGKHKGRDIGSGTVVWQLSEEVKAGKISL EEECCCCCHHHEEECCCCCCCEEEEECCCEECCCCCCCCCCCCEEEEEECCCCCCCEEEH HDFMAAEAGMSRSAGTCNTMGTASTMACMAESLGTSLPHNAAIPAVDSRRYVLAHLSGNR HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCE IVEMVDEDLTLSKVLTKSAFENAIRTNAAIGGSTNAVIHLQAIAGRMGVDLTLDDWTRVG EEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEEHHHHHHHC RGTPTIVDLQPSGRYLMEEFYYAGGLPAVLRRLGEADRLPHKDALTVNGKTLWENVQDAP CCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHCHHHCCCCCCEEEECCHHHHCCCCCCC LYNDAVILPLDAPLREDGGMCVMRGNLAPNGAVLKPSAATPALMQHRGRAVVFENFDDYK CCCCEEEEECCCCCCCCCCEEEEECCCCCCCCEECCCCCCHHHHHCCCCEEEEECCCCHH ARINDPDLDVTADDILVMKNCGPRGYHGMAEVGNMGLPAKLLEQGVTDMVRISDARMSGT HCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCCCCHHHHHCCCHHHEEECCCCCCCC AYGTVVLHVAPEAAAGGPLAAVRNGDWIALDAYSGKLHLEVDDAEIASRLAEADPTAEST EEEEEEEEECCCCCCCCCEEEEECCCEEEEEECCCEEEEEECHHHHHHHHHHCCCCCCCC RIASTGGYRQLYIEHVLQADQGCDFDFLVGCRGAEVPRHSH EEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA