Click here to switch to the map view.

The map label for this gene is cphB [H]

Identifier: 92113240

GI number: 92113240

Start: 1264959

End: 1265813

Strand: Direct

Name: cphB [H]

Synonym: Csal_1113

Alternate gene names: 92113240

Gene position: 1264959-1265813 (Clockwise)

Preceding gene: 92113236

Following gene: 92113241

Centisome position: 34.22

GC content: 64.21

Gene sequence:

>855_bases
ATGACATCAAGACCTTCGACGGTACGCGGCCATATCGTGGCCATTGGCGGTGCCGAGGATAAGACCTCGGAATTGGCCAT
TCTCAAGCGGGTCTTCGAACTCGCGCCCGAGGATAGTCATGAAGTCTCTGTCATCGCGACGGCGAGCAGCATCCCCGACC
AGCTCCTGCCCAGTTATGAAGCCGCCTTCAAGCGCCTGGGGGCCAGCCAGGTCCATGCACTGGACATCCAGGACCGCCAG
CAAGCCGCCGAGGCCGAGGTCGTGCGCTTGATCCAGCGCAGCGGGGTGATCTTCTTCACCGGCGGCGATCAGTTGCGCCT
GACCACGGTACTGGGGGGCTCCGCCACGCTGCGTGCGGTTCGTGAGCGCTTGCGGGCCGGGGCCGTGGTAGCGGGGACCA
GCGCGGGGGCGGCGGCGATGCCCAGCACCATGATCTACAACGGCGCGGCGTCGGATGCCCTGCGCAAGGGGGCGGTGAAC
ATGACCTTCGGGCTCGGCTTCGTTCGCGGCATGGTCATCGATAGTCACTTTCTCGAGCGTGGTCGCTTCACGCGTCTCAT
GGAGGTAGGGGCCAGCAACCCCGAGCAGCTAGGTGTCGGCCTGGGCGAGGACGCCGCCGTCATCATTCACCCCGACCGCA
TTCTCGAAACCATCGGGCCAGGGCATGTGATCATCATCGACAGCCGGGATCTCGCAAGCTCCAATATCGCGGAACTGGAG
ATGGGCGCCCCGGTCGCCGTCGAGAACATGATTCTGCACGCCATGGTCAGCGGGCATGGCTATGACGTCGATGCTCGGCG
CTATCTGGTGGCCGAGGAACTCGAAGCGGTATTGGCAAGGAGGCGCCAAGAATGA

Upstream 100 bases:

>100_bases
TGAAGTGTCTGGGGCAGCTGCCGCACGATACGACGTTGCCTAATGCACAAGGTGATGATTCAGTCATTCCTTAAAAGCGT
CGCTGGGCGACGAGGGAAAC

Downstream 100 bases:

>100_bases
AGATTCTCGAGCATCGCGCGTTGCGAGGGCCGAACTATTACAGTCGTTATCAGGCGATCTTCATGCGTCTGGACATCGAG
GCGCTGGAAACGCGACCGAG

Product: cyanophycinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MTSRPSTVRGHIVAIGGAEDKTSELAILKRVFELAPEDSHEVSVIATASSIPDQLLPSYEAAFKRLGASQVHALDIQDRQ
QAAEAEVVRLIQRSGVIFFTGGDQLRLTTVLGGSATLRAVRERLRAGAVVAGTSAGAAAMPSTMIYNGAASDALRKGAVN
MTFGLGFVRGMVIDSHFLERGRFTRLMEVGASNPEQLGVGLGEDAAVIIHPDRILETIGPGHVIIIDSRDLASSNIAELE
MGAPVAVENMILHAMVSGHGYDVDARRYLVAEELEAVLARRRQE

Sequences:

>Translated_284_residues
MTSRPSTVRGHIVAIGGAEDKTSELAILKRVFELAPEDSHEVSVIATASSIPDQLLPSYEAAFKRLGASQVHALDIQDRQ
QAAEAEVVRLIQRSGVIFFTGGDQLRLTTVLGGSATLRAVRERLRAGAVVAGTSAGAAAMPSTMIYNGAASDALRKGAVN
MTFGLGFVRGMVIDSHFLERGRFTRLMEVGASNPEQLGVGLGEDAAVIIHPDRILETIGPGHVIIIDSRDLASSNIAELE
MGAPVAVENMILHAMVSGHGYDVDARRYLVAEELEAVLARRRQE
>Mature_283_residues
TSRPSTVRGHIVAIGGAEDKTSELAILKRVFELAPEDSHEVSVIATASSIPDQLLPSYEAAFKRLGASQVHALDIQDRQQ
AAEAEVVRLIQRSGVIFFTGGDQLRLTTVLGGSATLRAVRERLRAGAVVAGTSAGAAAMPSTMIYNGAASDALRKGAVNM
TFGLGFVRGMVIDSHFLERGRFTRLMEVGASNPEQLGVGLGEDAAVIIHPDRILETIGPGHVIIIDSRDLASSNIAELEM
GAPVAVENMILHAMVSGHGYDVDARRYLVAEELEAVLARRRQE

Specific function: Exopeptidase that catalyzes the hydrolytic cleavage of multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides [H]

COG id: COG4242

COG function: function code QP; Cyanophycinase and related exopeptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S51 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005320
- InterPro:   IPR011811 [H]

Pfam domain/function: PF03575 Peptidase_S51 [H]

EC number: =3.4.15.6 [H]

Molecular weight: Translated: 30275; Mature: 30144

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRPSTVRGHIVAIGGAEDKTSELAILKRVFELAPEDSHEVSVIATASSIPDQLLPSYE
CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHCCHHH
AAFKRLGASQVHALDIQDRQQAAEAEVVRLIQRSGVIFFTGGDQLRLTTVLGGSATLRAV
HHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEEECCHHHHHHH
RERLRAGAVVAGTSAGAAAMPSTMIYNGAASDALRKGAVNMTFGLGFVRGMVIDSHFLER
HHHHHCCEEEEECCCCCHHCCCCEEECCCHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHC
GRFTRLMEVGASNPEQLGVGLGEDAAVIIHPDRILETIGPGHVIIIDSRDLASSNIAELE
CHHHHHHHHCCCCHHHHCCCCCCCCEEEECCHHHHHHCCCCEEEEEECCCCCCCCCHHEE
MGAPVAVENMILHAMVSGHGYDVDARRYLVAEELEAVLARRRQE
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TSRPSTVRGHIVAIGGAEDKTSELAILKRVFELAPEDSHEVSVIATASSIPDQLLPSYE
CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHCCHHH
AAFKRLGASQVHALDIQDRQQAAEAEVVRLIQRSGVIFFTGGDQLRLTTVLGGSATLRAV
HHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEEECCHHHHHHH
RERLRAGAVVAGTSAGAAAMPSTMIYNGAASDALRKGAVNMTFGLGFVRGMVIDSHFLER
HHHHHCCEEEEECCCCCHHCCCCEEECCCHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHC
GRFTRLMEVGASNPEQLGVGLGEDAAVIIHPDRILETIGPGHVIIIDSRDLASSNIAELE
CHHHHHHHHCCCCHHHHCCCCCCCCEEEECCHHHHHHCCCCEEEEEECCCCCCCCCHHEE
MGAPVAVENMILHAMVSGHGYDVDARRYLVAEELEAVLARRRQE
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11131019 [H]