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The map label for this gene is yiaO [C]

Identifier: 92113200

GI number: 92113200

Start: 1211618

End: 1212556

Strand: Direct

Name: yiaO [C]

Synonym: Csal_1072

Alternate gene names: 92113200

Gene position: 1211618-1212556 (Clockwise)

Preceding gene: 92113198

Following gene: 92113201

Centisome position: 32.78

GC content: 55.59

Gene sequence:

>939_bases
ATGTTTGCCGGAAATGTCTACGCACAAAGCACGGCGACCATCAAGGTCGCGAGTTACTTCGCGGAAGATCATCCTCAGAA
CGTGGCCATCCGCGAAAAATTCAAGCCGTATGTCGAAAGCCATTCCGACATGCAGGTGAAGATCTACCCCAACAGCTCGC
TCGGCGACGAGCGGCAATACACCAATGGCGTCAGAACCGGCAGCATCGAAATGGCGATTGCCGGTATGGGGCTGCAGACC
GCCAAGCCGCAAATCGGGTTTCCCGAGTGGCCGTTCCTGTTCGAAGACTATGATCAAGCGCAGTCGATGCTGAATGGTCC
TGTCGGCGAGAAGATCGATCCCTATTTCCGCGAGCTGGGGGTAGAACCCCTGGCTTGGACGGCGAATGGGTTCCGGGTTT
TCTCGAGCAAGGAAAAAATCGACAGCATGGACGACTTCGACGGTTTCAAGCTGAGAATGCCCAACCTGGAACTGTACGTG
GACGTGGGGCAAGCGTTAGGCGCCAACGTGCAGACCATGGGCATGTCCGAAGTCTACCCGGCGCTCGAGCAGGGGGTGAT
CGATGGACAGGATAATCCCCTCGCCACGCTGTATCGCTCGGGATGGTACGAGGTGCAGAACAACGTGCTGGAAAGCCGGC
ACATGTTCAGCCCCAACGTGTACCTGATGAACCAGCAGTTTTACGACAATCTGAGCGATGACGAGAAAGATGTCATCCAG
GAAGCCGCTCGCCAATCCATGGAGATGGAGTGGCAACTGATGCGCGAATCCGCCTCCGAGATCAAGCAAGAGCTCGAGAA
GGCCGGCCTGGAAGTGACGGAACCGAGCCAAGAACTTCACGATGAAATGGTGAAAGCCGTTCAGCCGATCTATGACGACT
TTTACAGTCAGTACGACTGGGCTGAAGACATGGTGAAGATGGTACGTGAAGGTTCCTGA

Upstream 100 bases:

>100_bases
CAGCGCCTGTATCAGCGAACGGAGAGCACAACAAATGACATACTCACTCCCAGCCATCATAGGCCGCACTCTGGTTGGTT
CCGCATTGGTGGGAACGGCC

Downstream 100 bases:

>100_bases
GGTGCGTCATATGCATGCCATGCGAACTCCTGGAGTTCGCATGGCAAAACCGAGTGGACAAGAGGTGGTTTCATGTCGAT
GACGACCTTGTTCGGTTTCT

Product: TRAP dicarboxylate transporter subunit DctP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MFAGNVYAQSTATIKVASYFAEDHPQNVAIREKFKPYVESHSDMQVKIYPNSSLGDERQYTNGVRTGSIEMAIAGMGLQT
AKPQIGFPEWPFLFEDYDQAQSMLNGPVGEKIDPYFRELGVEPLAWTANGFRVFSSKEKIDSMDDFDGFKLRMPNLELYV
DVGQALGANVQTMGMSEVYPALEQGVIDGQDNPLATLYRSGWYEVQNNVLESRHMFSPNVYLMNQQFYDNLSDDEKDVIQ
EAARQSMEMEWQLMRESASEIKQELEKAGLEVTEPSQELHDEMVKAVQPIYDDFYSQYDWAEDMVKMVREGS

Sequences:

>Translated_312_residues
MFAGNVYAQSTATIKVASYFAEDHPQNVAIREKFKPYVESHSDMQVKIYPNSSLGDERQYTNGVRTGSIEMAIAGMGLQT
AKPQIGFPEWPFLFEDYDQAQSMLNGPVGEKIDPYFRELGVEPLAWTANGFRVFSSKEKIDSMDDFDGFKLRMPNLELYV
DVGQALGANVQTMGMSEVYPALEQGVIDGQDNPLATLYRSGWYEVQNNVLESRHMFSPNVYLMNQQFYDNLSDDEKDVIQ
EAARQSMEMEWQLMRESASEIKQELEKAGLEVTEPSQELHDEMVKAVQPIYDDFYSQYDWAEDMVKMVREGS
>Mature_312_residues
MFAGNVYAQSTATIKVASYFAEDHPQNVAIREKFKPYVESHSDMQVKIYPNSSLGDERQYTNGVRTGSIEMAIAGMGLQT
AKPQIGFPEWPFLFEDYDQAQSMLNGPVGEKIDPYFRELGVEPLAWTANGFRVFSSKEKIDSMDDFDGFKLRMPNLELYV
DVGQALGANVQTMGMSEVYPALEQGVIDGQDNPLATLYRSGWYEVQNNVLESRHMFSPNVYLMNQQFYDNLSDDEKDVIQ
EAARQSMEMEWQLMRESASEIKQELEKAGLEVTEPSQELHDEMVKAVQPIYDDFYSQYDWAEDMVKMVREGS

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=281, Percent_Identity=27.0462633451957, Blast_Score=124, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 35622; Mature: 35622

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAGNVYAQSTATIKVASYFAEDHPQNVAIREKFKPYVESHSDMQVKIYPNSSLGDERQY
CCCCCEEECCCCEEHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHH
TNGVRTGSIEMAIAGMGLQTAKPQIGFPEWPFLFEDYDQAQSMLNGPVGEKIDPYFRELG
HCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHC
VEPLAWTANGFRVFSSKEKIDSMDDFDGFKLRMPNLELYVDVGQALGANVQTMGMSEVYP
CCCEEECCCCEEEECCHHHHCCCCCCCCCEEECCCEEEEEECHHHHCCCCCCCCHHHHHH
ALEQGVIDGQDNPLATLYRSGWYEVQNNVLESRHMFSPNVYLMNQQFYDNLSDDEKDVIQ
HHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECHHHHCCCCCCHHHHHH
EAARQSMEMEWQLMRESASEIKQELEKAGLEVTEPSQELHDEMVKAVQPIYDDFYSQYDW
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
AEDMVKMVREGS
HHHHHHHHHCCC
>Mature Secondary Structure
MFAGNVYAQSTATIKVASYFAEDHPQNVAIREKFKPYVESHSDMQVKIYPNSSLGDERQY
CCCCCEEECCCCEEHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHH
TNGVRTGSIEMAIAGMGLQTAKPQIGFPEWPFLFEDYDQAQSMLNGPVGEKIDPYFRELG
HCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHC
VEPLAWTANGFRVFSSKEKIDSMDDFDGFKLRMPNLELYVDVGQALGANVQTMGMSEVYP
CCCEEECCCCEEEECCHHHHCCCCCCCCCEEECCCEEEEEECHHHHCCCCCCCCHHHHHH
ALEQGVIDGQDNPLATLYRSGWYEVQNNVLESRHMFSPNVYLMNQQFYDNLSDDEKDVIQ
HHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECHHHHCCCCCCHHHHHH
EAARQSMEMEWQLMRESASEIKQELEKAGLEVTEPSQELHDEMVKAVQPIYDDFYSQYDW
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
AEDMVKMVREGS
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]