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The map label for this gene is yegE [C]

Identifier: 92113067

GI number: 92113067

Start: 1053571

End: 1054887

Strand: Direct

Name: yegE [C]

Synonym: Csal_0939

Alternate gene names: 92113067

Gene position: 1053571-1054887 (Clockwise)

Preceding gene: 92113066

Following gene: 92113068

Centisome position: 28.5

GC content: 62.95

Gene sequence:

>1317_bases
ATGGACATACCGGCCGCGAAGAATTTCTCCACCTTCCCCAGCGAGTGCGATGCATTGTTGGCGACCTCTTCCGCCATTTT
CTATGCGACCGGTCCCGGCTGGTGGCGCCATGACCTGCATTACGTCAGCCATAACGTCGCGCAGATGATCGACGCGTCAC
GCGAGCGCCTGCGCGAAGCGCCCGCGCTGTGGATGGAACGCATGCAGGACGCCAGTGGTGTCGAGCAGCGTCTGTTCACG
GCTCTCGAGGCGGGCGAGTCGCGCATACGCTTGCGCTACCGGATGACGTGCGATGATGGCAGCGAGCGCTATCTGCAGGA
CGATATCGCTGTCCACCGCGACGCCGCAGGAGAGGTCGTGGAGTTGGTCGGCGCCCTTGTCGACATTACCCGGCCCGACT
CCGTCCAGGCACGCCTCGAGGCCCTTGCCGAAAGTGAGCGGCATTATCGCTTCATCGTCGAAAACGTCAGCGATGCCATC
GTGCTGATGGATGCCGAGGGCGCGTGCCGTTTTGCCTCACCGTCGATTCAAGACATTCTCGGCCACCGTGCCGAGCGACT
GCGTGGGCGCGGGCTGCTCGAATTGCTGCCCCCGGACGATGCGCCGCGCGTTCAACGTCTGATCCACGACGCCTCGTTGC
ACGGCGAACCGCTGCGCATGGAATTGCGCATGCGCCACCGACTCGGCCATTACGTGTGGCTGGAGACATGCTGCTCCCCC
TCTTTGAATGCCGACACTGGGCGGTACGAGTGGATTCTCGCCGTGGCGCGGGATATCACCGATCGCAAGCATCGCGAGTA
CCGTCTGCAGGAACTGTCGACCACCGACAGCCTGACCGGGGCACTCAATCGTGGCGCCTATCTGAGCTGCTTGCGCAGCG
GGCTGGAAGCTGCCGATCATGTTGCCCAGCGCATGTCGCTGGTGATCTTCGATATCGACCATTTCAAGACGATCAACGAC
ACTTGGGGACATGCCGCCGGCGATCTGGTGCTGGCGTGCGTGGGGGAAATATGTCGCACGGCGTTACGCGATCAGGACGT
CTTCGGGCGTATCGGCGGCGAAGAGTTCTCGTTGATGCTGGCCGGGCAGTCATTGAACGACGCGGCGCTGCTCGCCGAGC
GGTTGCGCAAGAAGTTCGAGAGCGTGCGTGTCGAGTTCCACGGTGAATGGCTGAGTTTCTCGGTCAGCTTCGGTGTGGCG
GAGCGCCAGACCAGCGAGGGCGTGGAGTCCTTGTTGCACAGAGCCGACATGGGGCTCTATGCCGCCAAGCGCAACGGTCG
CAATCGGGTACACCAGGCACCGGCGCAAACGGCGTAA

Upstream 100 bases:

>100_bases
CACGCCGGCGTGCCGGCATGCGGTAATCCGCTTGCGCCTTCGTCGAATCAGCGGTCGCGTGGGTTCGTCACGAAGTCTGG
AAGTGGGGCGATGACTCATT

Downstream 100 bases:

>100_bases
GCGCCGACGATATCATCAAGAATCAAGGAGAAACGCATGCCACGTATCGGAGGGAAGAACATGGTGCGGCTGCTATTGGC
CTGTTGCCTGGGGATGTTGA

Product: PAS/PAC sensor-containing diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MDIPAAKNFSTFPSECDALLATSSAIFYATGPGWWRHDLHYVSHNVAQMIDASRERLREAPALWMERMQDASGVEQRLFT
ALEAGESRIRLRYRMTCDDGSERYLQDDIAVHRDAAGEVVELVGALVDITRPDSVQARLEALAESERHYRFIVENVSDAI
VLMDAEGACRFASPSIQDILGHRAERLRGRGLLELLPPDDAPRVQRLIHDASLHGEPLRMELRMRHRLGHYVWLETCCSP
SLNADTGRYEWILAVARDITDRKHREYRLQELSTTDSLTGALNRGAYLSCLRSGLEAADHVAQRMSLVIFDIDHFKTIND
TWGHAAGDLVLACVGEICRTALRDQDVFGRIGGEEFSLMLAGQSLNDAALLAERLRKKFESVRVEFHGEWLSFSVSFGVA
ERQTSEGVESLLHRADMGLYAAKRNGRNRVHQAPAQTA

Sequences:

>Translated_438_residues
MDIPAAKNFSTFPSECDALLATSSAIFYATGPGWWRHDLHYVSHNVAQMIDASRERLREAPALWMERMQDASGVEQRLFT
ALEAGESRIRLRYRMTCDDGSERYLQDDIAVHRDAAGEVVELVGALVDITRPDSVQARLEALAESERHYRFIVENVSDAI
VLMDAEGACRFASPSIQDILGHRAERLRGRGLLELLPPDDAPRVQRLIHDASLHGEPLRMELRMRHRLGHYVWLETCCSP
SLNADTGRYEWILAVARDITDRKHREYRLQELSTTDSLTGALNRGAYLSCLRSGLEAADHVAQRMSLVIFDIDHFKTIND
TWGHAAGDLVLACVGEICRTALRDQDVFGRIGGEEFSLMLAGQSLNDAALLAERLRKKFESVRVEFHGEWLSFSVSFGVA
ERQTSEGVESLLHRADMGLYAAKRNGRNRVHQAPAQTA
>Mature_438_residues
MDIPAAKNFSTFPSECDALLATSSAIFYATGPGWWRHDLHYVSHNVAQMIDASRERLREAPALWMERMQDASGVEQRLFT
ALEAGESRIRLRYRMTCDDGSERYLQDDIAVHRDAAGEVVELVGALVDITRPDSVQARLEALAESERHYRFIVENVSDAI
VLMDAEGACRFASPSIQDILGHRAERLRGRGLLELLPPDDAPRVQRLIHDASLHGEPLRMELRMRHRLGHYVWLETCCSP
SLNADTGRYEWILAVARDITDRKHREYRLQELSTTDSLTGALNRGAYLSCLRSGLEAADHVAQRMSLVIFDIDHFKTIND
TWGHAAGDLVLACVGEICRTALRDQDVFGRIGGEEFSLMLAGQSLNDAALLAERLRKKFESVRVEFHGEWLSFSVSFGVA
ERQTSEGVESLLHRADMGLYAAKRNGRNRVHQAPAQTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1788381, Length=357, Percent_Identity=26.890756302521, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI87081881, Length=181, Percent_Identity=37.0165745856354, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1786584, Length=175, Percent_Identity=34.2857142857143, Blast_Score=105, Evalue=7e-24,
Organism=Escherichia coli, GI145693134, Length=156, Percent_Identity=37.8205128205128, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI87082007, Length=165, Percent_Identity=41.2121212121212, Blast_Score=102, Evalue=5e-23,
Organism=Escherichia coli, GI1787262, Length=159, Percent_Identity=34.5911949685535, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI87081977, Length=159, Percent_Identity=33.9622641509434, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1787541, Length=288, Percent_Identity=24.6527777777778, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1787802, Length=159, Percent_Identity=32.0754716981132, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1787056, Length=167, Percent_Identity=31.1377245508982, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1787816, Length=180, Percent_Identity=28.8888888888889, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1788085, Length=171, Percent_Identity=29.2397660818713, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI87081974, Length=157, Percent_Identity=26.7515923566879, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788956, Length=154, Percent_Identity=34.4155844155844, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 49210; Mature: 49210

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIPAAKNFSTFPSECDALLATSSAIFYATGPGWWRHDLHYVSHNVAQMIDASRERLREA
CCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PALWMERMQDASGVEQRLFTALEAGESRIRLRYRMTCDDGSERYLQDDIAVHRDAAGEVV
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCHHHHH
ELVGALVDITRPDSVQARLEALAESERHYRFIVENVSDAIVLMDAEGACRFASPSIQDIL
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHH
GHRAERLRGRGLLELLPPDDAPRVQRLIHDASLHGEPLRMELRMRHRLGHYVWLETCCSP
HHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHCCC
SLNADTGRYEWILAVARDITDRKHREYRLQELSTTDSLTGALNRGAYLSCLRSGLEAADH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHH
VAQRMSLVIFDIDHFKTINDTWGHAAGDLVLACVGEICRTALRDQDVFGRIGGEEFSLML
HHHHHHEEEEECHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEE
AGQSLNDAALLAERLRKKFESVRVEFHGEWLSFSVSFGVAERQTSEGVESLLHRADMGLY
ECCCCCHHHHHHHHHHHHHHHHEEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHCCCHH
AAKRNGRNRVHQAPAQTA
HHHCCCCHHHHCCCCCCC
>Mature Secondary Structure
MDIPAAKNFSTFPSECDALLATSSAIFYATGPGWWRHDLHYVSHNVAQMIDASRERLREA
CCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PALWMERMQDASGVEQRLFTALEAGESRIRLRYRMTCDDGSERYLQDDIAVHRDAAGEVV
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCHHHHH
ELVGALVDITRPDSVQARLEALAESERHYRFIVENVSDAIVLMDAEGACRFASPSIQDIL
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHH
GHRAERLRGRGLLELLPPDDAPRVQRLIHDASLHGEPLRMELRMRHRLGHYVWLETCCSP
HHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHCCC
SLNADTGRYEWILAVARDITDRKHREYRLQELSTTDSLTGALNRGAYLSCLRSGLEAADH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHH
VAQRMSLVIFDIDHFKTINDTWGHAAGDLVLACVGEICRTALRDQDVFGRIGGEEFSLML
HHHHHHEEEEECHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEE
AGQSLNDAALLAERLRKKFESVRVEFHGEWLSFSVSFGVAERQTSEGVESLLHRADMGLY
ECCCCCHHHHHHHHHHHHHHHHEEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHCCCHH
AAKRNGRNRVHQAPAQTA
HHHCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]