| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is katA [H]
Identifier: 92112931
GI number: 92112931
Start: 899460
End: 900923
Strand: Direct
Name: katA [H]
Synonym: Csal_0803
Alternate gene names: 92112931
Gene position: 899460-900923 (Clockwise)
Preceding gene: 92112930
Following gene: 92112933
Centisome position: 24.33
GC content: 61.41
Gene sequence:
>1464_bases GTGACGCAAGACAATCGCAAGCCGACGACGACAGATGCCGGGATTCCGGTCGCCAGCGACGAGCATTCGCTCTCGGTGGG CCCCGACGGCCCGCTCGTCCTGCACGATCACTATCTCATCGAGCAGATGGCGAATTTCAACCGCGAACGGATTCCCGAGC GTCAGCCGCACGCCAAGGGCAGTGGCGCCTTCGGCCACTTCGAGGTGACCGAGGACGTGAGCCGGTACACCAAGGCCGCC GTTTTCCAGCCCGGTACCAAGACCGACGTGCTGATTCGCTTCTCCACGGTGGCCGGCGAGCGCGGGAGCCCCGATACATG GCGCGACCCGCGCGGGTTCTCGATCAAGTTCTACACCAGCGAAGGCAATTACGACATGGTGGGGAACAACACGCCGGTGT TCTTCATCCGGGATCCGATGAAGTTCCAGCACTTCATCCGCTCGCAGAAACGCCGTGCCGACAGCAACCTTCGCGATCAT GACATGCAATGGGACTTCTGGACGCTGTCGCCGGAGTCCGCCCACCAGGTCACCTGGCTGATGGGAGACCGGGGCATTCC CAAGACCTGGCGCCACATGAACGGTTATTCCAGCCATACGTACATGTGGGCCAATGCCCAGGGCGAGAAGTTCTGGGTCA AGTACCACTTCAAGACGGACCAGGGCATCGAGTGCCTGACTCAGGAAGAAGCCGACCGGCTGGCCGGGGAGGACAGTGAC TACCATACCCGTGACCTGTATGAAGCCATCGAGCGTGGCGACTATCCGAGCTGGACGCTCTACATGCAGATCATGCCGTT CGCGGATGCGGATACCTATCGCATCAATCCGTTCGACCTGACCAAGGTCTGGCCGCACGACGACTATCCCATGATCAAGG TCGGCAAGCTGCAGTTGAACCGCAATCCGACCGACAATCATGCCGAGATCGAGCAGGCGGCCTTCGAGCCCAACAACCTC GTGCCCGGCATCGGCATCAGCCCGGACAAGATGCTCATCGGCCGCGTATTCTCCTATGCCGATGCGCACCGCGCGCGTCT CGGGGTCAACTACAAGCAGATCCCGGTCAATGCGCCGCAGGCTCCCGTGCACAGTTACAGCAAGGACGGAGCGATGCGCA TCAACAAGGTGTCGGACCCGGTATATGCCCCCAACTCCAAGGGCGGTCCGGCGGCGGATGGCGAGCGTTATCCCACCGAT TCCACCTGGGAAGCCAACGGGCAGATGGTGCGTGCGCCCTATGCCTTGCGCAAGGACGACGATGACTACAGCCAGGCCAA TGCCTTGATCAACAAGGTCATGGACGATGCCGCGCGGGATCGCCTGGTCAACAACGTGGTCGGCCATGTCTCGGGCGGGG TCAAGGAACCGGTGCTGTCGCGCGTGTTCGAGTACTGGAAGAACATCGATGCCGAGATCGGTCGCCGCATCGAAGAAGGA GTGAAAGCGAACAAGGCCGGATAA
Upstream 100 bases:
>100_bases CCCTTCAGTCGATAGCACCATCGCGCCAGCGGTTCGTTTCCAAGGGAAGGACGTGGCGACATGCCGTGCCACATAGAAAA CATGACGGGGAGAGACCATC
Downstream 100 bases:
>100_bases CGACGTATCGCGCCTGATTCGCTGGACTGACCGCACGGCCCGCTTCCCTTGAGGAGCGGGCCGTGTTTTTGTCGGGCGTG CCGGGGCGGGGCTTCCCTCG
Product: catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 487; Mature: 486
Protein sequence:
>487_residues MTQDNRKPTTTDAGIPVASDEHSLSVGPDGPLVLHDHYLIEQMANFNRERIPERQPHAKGSGAFGHFEVTEDVSRYTKAA VFQPGTKTDVLIRFSTVAGERGSPDTWRDPRGFSIKFYTSEGNYDMVGNNTPVFFIRDPMKFQHFIRSQKRRADSNLRDH DMQWDFWTLSPESAHQVTWLMGDRGIPKTWRHMNGYSSHTYMWANAQGEKFWVKYHFKTDQGIECLTQEEADRLAGEDSD YHTRDLYEAIERGDYPSWTLYMQIMPFADADTYRINPFDLTKVWPHDDYPMIKVGKLQLNRNPTDNHAEIEQAAFEPNNL VPGIGISPDKMLIGRVFSYADAHRARLGVNYKQIPVNAPQAPVHSYSKDGAMRINKVSDPVYAPNSKGGPAADGERYPTD STWEANGQMVRAPYALRKDDDDYSQANALINKVMDDAARDRLVNNVVGHVSGGVKEPVLSRVFEYWKNIDAEIGRRIEEG VKANKAG
Sequences:
>Translated_487_residues MTQDNRKPTTTDAGIPVASDEHSLSVGPDGPLVLHDHYLIEQMANFNRERIPERQPHAKGSGAFGHFEVTEDVSRYTKAA VFQPGTKTDVLIRFSTVAGERGSPDTWRDPRGFSIKFYTSEGNYDMVGNNTPVFFIRDPMKFQHFIRSQKRRADSNLRDH DMQWDFWTLSPESAHQVTWLMGDRGIPKTWRHMNGYSSHTYMWANAQGEKFWVKYHFKTDQGIECLTQEEADRLAGEDSD YHTRDLYEAIERGDYPSWTLYMQIMPFADADTYRINPFDLTKVWPHDDYPMIKVGKLQLNRNPTDNHAEIEQAAFEPNNL VPGIGISPDKMLIGRVFSYADAHRARLGVNYKQIPVNAPQAPVHSYSKDGAMRINKVSDPVYAPNSKGGPAADGERYPTD STWEANGQMVRAPYALRKDDDDYSQANALINKVMDDAARDRLVNNVVGHVSGGVKEPVLSRVFEYWKNIDAEIGRRIEEG VKANKAG >Mature_486_residues TQDNRKPTTTDAGIPVASDEHSLSVGPDGPLVLHDHYLIEQMANFNRERIPERQPHAKGSGAFGHFEVTEDVSRYTKAAV FQPGTKTDVLIRFSTVAGERGSPDTWRDPRGFSIKFYTSEGNYDMVGNNTPVFFIRDPMKFQHFIRSQKRRADSNLRDHD MQWDFWTLSPESAHQVTWLMGDRGIPKTWRHMNGYSSHTYMWANAQGEKFWVKYHFKTDQGIECLTQEEADRLAGEDSDY HTRDLYEAIERGDYPSWTLYMQIMPFADADTYRINPFDLTKVWPHDDYPMIKVGKLQLNRNPTDNHAEIEQAAFEPNNLV PGIGISPDKMLIGRVFSYADAHRARLGVNYKQIPVNAPQAPVHSYSKDGAMRINKVSDPVYAPNSKGGPAADGERYPTDS TWEANGQMVRAPYALRKDDDDYSQANALINKVMDDAARDRLVNNVVGHVSGGVKEPVLSRVFEYWKNIDAEIGRRIEEGV KANKAG
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=447, Percent_Identity=54.586129753915, Blast_Score=491, Evalue=1e-139, Organism=Escherichia coli, GI48994891, Length=384, Percent_Identity=44.2708333333333, Blast_Score=330, Evalue=9e-92, Organism=Caenorhabditis elegans, GI71998444, Length=478, Percent_Identity=48.1171548117155, Blast_Score=461, Evalue=1e-130, Organism=Caenorhabditis elegans, GI25147792, Length=462, Percent_Identity=48.2683982683983, Blast_Score=434, Evalue=1e-122, Organism=Caenorhabditis elegans, GI25151141, Length=469, Percent_Identity=47.9744136460554, Blast_Score=434, Evalue=1e-122, Organism=Saccharomyces cerevisiae, GI6320462, Length=488, Percent_Identity=46.1065573770492, Blast_Score=409, Evalue=1e-115, Organism=Saccharomyces cerevisiae, GI6321525, Length=346, Percent_Identity=47.6878612716763, Blast_Score=331, Evalue=2e-91, Organism=Drosophila melanogaster, GI17981717, Length=481, Percent_Identity=48.2328482328482, Blast_Score=467, Evalue=1e-132, Organism=Drosophila melanogaster, GI19920968, Length=484, Percent_Identity=42.5619834710744, Blast_Score=422, Evalue=1e-118,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 55338; Mature: 55207
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQDNRKPTTTDAGIPVASDEHSLSVGPDGPLVLHDHYLIEQMANFNRERIPERQPHAKG CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEHHHHHHHHHCCCHHHCCCCCCCCCC SGAFGHFEVTEDVSRYTKAAVFQPGTKTDVLIRFSTVAGERGSPDTWRDPRGFSIKFYTS CCCCCEEEHHHHHHHHHHHHEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEC EGNYDMVGNNTPVFFIRDPMKFQHFIRSQKRRADSNLRDHDMQWDFWTLSPESAHQVTWL CCCEEECCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEEE MGDRGIPKTWRHMNGYSSHTYMWANAQGEKFWVKYHFKTDQGIECLTQEEADRLAGEDSD ECCCCCCHHHHHCCCCCCCEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCC YHTRDLYEAIERGDYPSWTLYMQIMPFADADTYRINPFDLTKVWPHDDYPMIKVGKLQLN CHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEECCEECEEECCCCCCCEEEEEEEEEC RNPTDNHAEIEQAAFEPNNLVPGIGISPDKMLIGRVFSYADAHRARLGVNYKQIPVNAPQ CCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCC APVHSYSKDGAMRINKVSDPVYAPNSKGGPAADGERYPTDSTWEANGQMVRAPYALRKDD CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC DDYSQANALINKVMDDAARDRLVNNVVGHVSGGVKEPVLSRVFEYWKNIDAEIGRRIEEG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH VKANKAG HHCCCCC >Mature Secondary Structure TQDNRKPTTTDAGIPVASDEHSLSVGPDGPLVLHDHYLIEQMANFNRERIPERQPHAKG CCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEHHHHHHHHHCCCHHHCCCCCCCCCC SGAFGHFEVTEDVSRYTKAAVFQPGTKTDVLIRFSTVAGERGSPDTWRDPRGFSIKFYTS CCCCCEEEHHHHHHHHHHHHEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEC EGNYDMVGNNTPVFFIRDPMKFQHFIRSQKRRADSNLRDHDMQWDFWTLSPESAHQVTWL CCCEEECCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEEE MGDRGIPKTWRHMNGYSSHTYMWANAQGEKFWVKYHFKTDQGIECLTQEEADRLAGEDSD ECCCCCCHHHHHCCCCCCCEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCC YHTRDLYEAIERGDYPSWTLYMQIMPFADADTYRINPFDLTKVWPHDDYPMIKVGKLQLN CHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEECCEECEEECCCCCCCEEEEEEEEEC RNPTDNHAEIEQAAFEPNNLVPGIGISPDKMLIGRVFSYADAHRARLGVNYKQIPVNAPQ CCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCC APVHSYSKDGAMRINKVSDPVYAPNSKGGPAADGERYPTDSTWEANGQMVRAPYALRKDD CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC DDYSQANALINKVMDDAARDRLVNNVVGHVSGGVKEPVLSRVFEYWKNIDAEIGRRIEEG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH VKANKAG HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1426241; 12454454 [H]