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The map label for this gene is siaP [H]

Identifier: 92112883

GI number: 92112883

Start: 848201

End: 849187

Strand: Direct

Name: siaP [H]

Synonym: Csal_0754

Alternate gene names: 92112883

Gene position: 848201-849187 (Clockwise)

Preceding gene: 92112882

Following gene: 92112884

Centisome position: 22.95

GC content: 62.01

Gene sequence:

>987_bases
ATGTTCACGAGAATCGGCATGGGAGTGGCCACGGCGGCATTGGCGCTGGGCCTGACCACTACGGCATCCGCTGAAACCCT
GCGCTACGCCCACGTAGGGGCGGAAGGCGACCTTCAAACCCGCTACGCGGCCGAAGCCGCCAAAGAGATCAACGAGGCGA
CCGACGGCAACATCTCGGTTCAGGTCTTTCCCGCCAGCCAGTTGGGTGGCGTGGCCGAAATGGTGGATGGGGTACGCATG
GGGTCCATCGGCATGGGCCATCATGACTTTGCCTCGCTGGCTCGGATCGTGCCGGAGGCGGCTGTCTTCAATGCCCCCTA
CGTCTATCGCGATGCCGAACATGCCCTGAACGCGACAGCGCCGGAGTCGCCGGCAGTGCAGAAGATCAATCAGCAACTGA
TCGAAGAGGGTGGTGTTCGCATCATCGGCAGGATCTATCGGGGCAAGCGCCATATCTCTTCCAACTTCGCGGTCAAGACG
CCGGAAGATCTCGACAACAAACCCTTCCGGGCCGTGCCGCTGGATCTCTGGGTCTCCATGGTCAAGGGCTTTGGCGCCAC
GCCGACACCCGTCGCGGTCTCGGAGCTGCCCACGGCACTGATGACCGGGCTGGTGGTCGGCCAGGAAAACCCGCTGACCA
TGATCAACGCCAACCAGCTGTACGAAGTCCAGTCGCATGTCTCGCTCACCGGCCACATGGATTCCGTGCTGGCGGTCTTC
GTGAACGAGCAGGCGTGGCAGTCGCTGGATGAGTCGGATCGCAGCGCCATCAAGAAGGTGCTCGACGAGAAGGCAGAGCA
GTCGCTGCAGTGGGCAGAAAGCTCGGAAGACGAGTTGGTGCAGACACTGACGGACAAGGGCATGACGGTGCTGGACGAGG
ACGACGGGCTGGACGTGGAAGCCTTCCGCGAGCAGGTGCGGGCCCAGGTCGACCAGGACTTTCCGAACTTCAAGCCCTAC
ATCGATATGATCTCGAAGGTCGAGTGA

Upstream 100 bases:

>100_bases
TTCGCGATCGGCGACGAACTGCGCCGGCGAAGCATCATTGCTGCCCATACCAAGGGCAGCGCCAGCACGTACTCAACCGA
CAAATATAAGTGAGGCACGC

Downstream 100 bases:

>100_bases
GTTAGCGCCAGGAGCCCCGGCATGGGGCTCCTTGGCGAATGGTTCGTCAGTAAAGGAGTGTCGGCATGCATCTAGTCAGG
AGGCTGCTGGAAGGGTTGTG

Product: TRAP dicarboxylate transporter subunit DctP

Products: NA

Alternate protein names: Extracytoplasmic solute receptor protein siaP; N-acetylneuraminic-binding protein; Neu5Ac-binding protein [H]

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MFTRIGMGVATAALALGLTTTASAETLRYAHVGAEGDLQTRYAAEAAKEINEATDGNISVQVFPASQLGGVAEMVDGVRM
GSIGMGHHDFASLARIVPEAAVFNAPYVYRDAEHALNATAPESPAVQKINQQLIEEGGVRIIGRIYRGKRHISSNFAVKT
PEDLDNKPFRAVPLDLWVSMVKGFGATPTPVAVSELPTALMTGLVVGQENPLTMINANQLYEVQSHVSLTGHMDSVLAVF
VNEQAWQSLDESDRSAIKKVLDEKAEQSLQWAESSEDELVQTLTDKGMTVLDEDDGLDVEAFREQVRAQVDQDFPNFKPY
IDMISKVE

Sequences:

>Translated_328_residues
MFTRIGMGVATAALALGLTTTASAETLRYAHVGAEGDLQTRYAAEAAKEINEATDGNISVQVFPASQLGGVAEMVDGVRM
GSIGMGHHDFASLARIVPEAAVFNAPYVYRDAEHALNATAPESPAVQKINQQLIEEGGVRIIGRIYRGKRHISSNFAVKT
PEDLDNKPFRAVPLDLWVSMVKGFGATPTPVAVSELPTALMTGLVVGQENPLTMINANQLYEVQSHVSLTGHMDSVLAVF
VNEQAWQSLDESDRSAIKKVLDEKAEQSLQWAESSEDELVQTLTDKGMTVLDEDDGLDVEAFREQVRAQVDQDFPNFKPY
IDMISKVE
>Mature_328_residues
MFTRIGMGVATAALALGLTTTASAETLRYAHVGAEGDLQTRYAAEAAKEINEATDGNISVQVFPASQLGGVAEMVDGVRM
GSIGMGHHDFASLARIVPEAAVFNAPYVYRDAEHALNATAPESPAVQKINQQLIEEGGVRIIGRIYRGKRHISSNFAVKT
PEDLDNKPFRAVPLDLWVSMVKGFGATPTPVAVSELPTALMTGLVVGQENPLTMINANQLYEVQSHVSLTGHMDSVLAVF
VNEQAWQSLDESDRSAIKKVLDEKAEQSLQWAESSEDELVQTLTDKGMTVLDEDDGLDVEAFREQVRAQVDQDFPNFKPY
IDMISKVE

Specific function: Part of the tripartite ATP-independent periplasmic (TRAP) transport system siaPT involved in the uptake of sialic acid. This protein specifically binds sialic acid [H]

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=328, Percent_Identity=26.8292682926829, Blast_Score=117, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 35635; Mature: 35635

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTRIGMGVATAALALGLTTTASAETLRYAHVGAEGDLQTRYAAEAAKEINEATDGNISV
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCEEE
QVFPASQLGGVAEMVDGVRMGSIGMGHHDFASLARIVPEAAVFNAPYVYRDAEHALNATA
EEECCHHHCCHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHCCCCC
PESPAVQKINQQLIEEGGVRIIGRIYRGKRHISSNFAVKTPEDLDNKPFRAVPLDLWVSM
CCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECHHHHHHH
VKGFGATPTPVAVSELPTALMTGLVVGQENPLTMINANQLYEVQSHVSLTGHMDSVLAVF
HHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
VNEQAWQSLDESDRSAIKKVLDEKAEQSLQWAESSEDELVQTLTDKGMTVLDEDDGLDVE
HCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCCCCHH
AFREQVRAQVDQDFPNFKPYIDMISKVE
HHHHHHHHHHHCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MFTRIGMGVATAALALGLTTTASAETLRYAHVGAEGDLQTRYAAEAAKEINEATDGNISV
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCEEE
QVFPASQLGGVAEMVDGVRMGSIGMGHHDFASLARIVPEAAVFNAPYVYRDAEHALNATA
EEECCHHHCCHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHCCCCC
PESPAVQKINQQLIEEGGVRIIGRIYRGKRHISSNFAVKTPEDLDNKPFRAVPLDLWVSM
CCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECHHHHHHH
VKGFGATPTPVAVSELPTALMTGLVVGQENPLTMINANQLYEVQSHVSLTGHMDSVLAVF
HHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
VNEQAWQSLDESDRSAIKKVLDEKAEQSLQWAESSEDELVQTLTDKGMTVLDEDDGLDVE
HCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCCCCHH
AFREQVRAQVDQDFPNFKPYIDMISKVE
HHHHHHHHHHHCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA