| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is oadA [H]
Identifier: 92112825
GI number: 92112825
Start: 775595
End: 777403
Strand: Direct
Name: oadA [H]
Synonym: Csal_0693
Alternate gene names: 92112825
Gene position: 775595-777403 (Clockwise)
Preceding gene: 92112824
Following gene: 92112826
Centisome position: 20.98
GC content: 67.66
Gene sequence:
>1809_bases ATGAGCGATACTCAACGTCCGCTGGGCATTACCGACGTGGTGCTGCGCGACGCGCACCAATCCCTCTTCGCCACGCGCAT GCGCCTGGACGACATGCTGCCCATCGCCGAGAAACTCGACCGCGTGGGATTCTGGTCGCTGGAATCCTGGGGCGGCGCGA CTTTCGACGCCTGCATTCGCTATCTGGGCGAGGACCCCTGGGCGCGTATTCGGGCTCTGAAGGAAGCCATGCCCAACACC CCGCAGCAGATGCTGCTGCGAGGTCAGAACCTGCTCGGCTATCGGCACTACGCCGACGACGTGGTCGATGCGTTCGTCGA GCGTGCCCGGGCCAATGGCGTGGATGTGTTCCGGGTCTTCGACGCCATGAACGACACCCGCAATCTGGAACGCGCGCTCA AGGCCGTGGTGGCTTGCGAGGGACATGCCCAGGGCACCCTGGCGTACACCGTGAGCCCCGTGCACACCCTGGAAAGCTGG CTGGACATGGCCAAGCGCATCGAGGACATGGGCGCGCACTCGCTGGCGATCAAGGACATGGCCGGTCTGCTGACGCCCTA CATGGCGCATGAGCTGGTCTCGCGGCTCAAGCAGACCGTGGCCTTGCCCATCCATGTGCATTGCCATGCCACCACGGGGC TTTCCACCGCGACGCTGCTCAAGGCCGTCGAGGCCGGCGCCGACACCGTCGACACGGCGATCTCGTCGATGGCGATGACC TACGGCCACAGCCCCACCGAGTCCCTGGTGGCGATGCTGCGCGAGACGCCGCGCGATACCGGGCTCGACCTCGAGCTGCT CGAGGACATCGCCGCCTATTTTCGTGAGGTGCGCAAGAAATACACGGCGTTCGAAGGCTCACTGCGCGGCATCGACTCGC GCATCCTGGTGGCGCAGGTGCCCGGCGGCATGCTCACCAACATGGAAGGCCAGCTCAAGGAGCAAGGCGCGGGAGACCGG CTCGACGAGGTGCTCGGCGAAATTCCCCGCGTGCGCGAGGACCTGGGGTACATTCCCCTGGTCACGCCCACGTCGCAGAT CGTCGGGACCCAGGCGGTGATGAACGTGATGATGGGCAGCCGCTATCAGTCGATCTCCAAGGAGGTGCAGGCGCTGCTCA AGGGTGAATACGGCGCCGCGCCGGCGCCCTTCGATGCGGACTTGCAGGCGCGTGCCCTGGCGGGAGAGCAGCCGATCACC TGCCGACCCGCCGACCGTCTCGCGCCGGAGATGGAACGCCTCGCGGCGGAGCTCAAGGAAAAGGCCGGGACGGACGCGGT ACGTCTGGCCGAGGGCGAGCGCGAGACCGACGACGTGCTCACCTACGCGCTGTTCCCGCAGATCGGCTTCAAGTTCCTCG CCCACCGTGACGACCCCTCGGCGTTCGAGCCGGCACCGCAAGCGCCGGGGGAGACGCCGCCGCCATCCCGTGACGAGTCG CCTGCCACGGCACCGTCCGCCGCGCCCCGCGCGCCTGAAACCTATACCGTCACTGTCAACGGCAAGGCCTACGTGGTCGA GGTGGCCGAGGGCGGCGAGGTCTCGCAGGTGGCTGCCCGGGCGGACGCGTCGCCCGCGGCGGCGCCTGCGCCGGCCAGCG GCGAGGCGATCACTGCGCCGCTGGCCGGCAACATCTTCAAGGTCAATGTCGCCGCCGGCGACAGCGTCGCCGAGGGCGAT GTGGTGATCATCCTCGAGGCGATGAAGATGGAAACCGAAGTGCGCGCGGCACAAGCGGGCACCGTCTCCGCCGTCGCGGT CAAGGAGGGCGACAGCGTCGCCGTCGGTGACGAACTGATCCGTTTGTGA
Upstream 100 bases:
>100_bases AAGCGTTACCGCCGTCATCACGGCGATTGAGCGACCCTCTCGCCGCCGCGCATCGACACGCTTCGACAAGACCCCTCATT CTTCACAATCAGGAAGGGCC
Downstream 100 bases:
>100_bases GGCGCGTCGCATGGATAAATTGCTAGGCCTATGGCAAGGCTCGGGCCTCTACAACATGAGCATCGGCCAGGCGGCGATGA TTCTCGTCGGGCTGGTACTG
Product: oxaloacetate decarboxylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 602; Mature: 601
Protein sequence:
>602_residues MSDTQRPLGITDVVLRDAHQSLFATRMRLDDMLPIAEKLDRVGFWSLESWGGATFDACIRYLGEDPWARIRALKEAMPNT PQQMLLRGQNLLGYRHYADDVVDAFVERARANGVDVFRVFDAMNDTRNLERALKAVVACEGHAQGTLAYTVSPVHTLESW LDMAKRIEDMGAHSLAIKDMAGLLTPYMAHELVSRLKQTVALPIHVHCHATTGLSTATLLKAVEAGADTVDTAISSMAMT YGHSPTESLVAMLRETPRDTGLDLELLEDIAAYFREVRKKYTAFEGSLRGIDSRILVAQVPGGMLTNMEGQLKEQGAGDR LDEVLGEIPRVREDLGYIPLVTPTSQIVGTQAVMNVMMGSRYQSISKEVQALLKGEYGAAPAPFDADLQARALAGEQPIT CRPADRLAPEMERLAAELKEKAGTDAVRLAEGERETDDVLTYALFPQIGFKFLAHRDDPSAFEPAPQAPGETPPPSRDES PATAPSAAPRAPETYTVTVNGKAYVVEVAEGGEVSQVAARADASPAAAPAPASGEAITAPLAGNIFKVNVAAGDSVAEGD VVIILEAMKMETEVRAAQAGTVSAVAVKEGDSVAVGDELIRL
Sequences:
>Translated_602_residues MSDTQRPLGITDVVLRDAHQSLFATRMRLDDMLPIAEKLDRVGFWSLESWGGATFDACIRYLGEDPWARIRALKEAMPNT PQQMLLRGQNLLGYRHYADDVVDAFVERARANGVDVFRVFDAMNDTRNLERALKAVVACEGHAQGTLAYTVSPVHTLESW LDMAKRIEDMGAHSLAIKDMAGLLTPYMAHELVSRLKQTVALPIHVHCHATTGLSTATLLKAVEAGADTVDTAISSMAMT YGHSPTESLVAMLRETPRDTGLDLELLEDIAAYFREVRKKYTAFEGSLRGIDSRILVAQVPGGMLTNMEGQLKEQGAGDR LDEVLGEIPRVREDLGYIPLVTPTSQIVGTQAVMNVMMGSRYQSISKEVQALLKGEYGAAPAPFDADLQARALAGEQPIT CRPADRLAPEMERLAAELKEKAGTDAVRLAEGERETDDVLTYALFPQIGFKFLAHRDDPSAFEPAPQAPGETPPPSRDES PATAPSAAPRAPETYTVTVNGKAYVVEVAEGGEVSQVAARADASPAAAPAPASGEAITAPLAGNIFKVNVAAGDSVAEGD VVIILEAMKMETEVRAAQAGTVSAVAVKEGDSVAVGDELIRL >Mature_601_residues SDTQRPLGITDVVLRDAHQSLFATRMRLDDMLPIAEKLDRVGFWSLESWGGATFDACIRYLGEDPWARIRALKEAMPNTP QQMLLRGQNLLGYRHYADDVVDAFVERARANGVDVFRVFDAMNDTRNLERALKAVVACEGHAQGTLAYTVSPVHTLESWL DMAKRIEDMGAHSLAIKDMAGLLTPYMAHELVSRLKQTVALPIHVHCHATTGLSTATLLKAVEAGADTVDTAISSMAMTY GHSPTESLVAMLRETPRDTGLDLELLEDIAAYFREVRKKYTAFEGSLRGIDSRILVAQVPGGMLTNMEGQLKEQGAGDRL DEVLGEIPRVREDLGYIPLVTPTSQIVGTQAVMNVMMGSRYQSISKEVQALLKGEYGAAPAPFDADLQARALAGEQPITC RPADRLAPEMERLAAELKEKAGTDAVRLAEGERETDDVLTYALFPQIGFKFLAHRDDPSAFEPAPQAPGETPPPSRDESP ATAPSAAPRAPETYTVTVNGKAYVVEVAEGGEVSQVAARADASPAAAPAPASGEAITAPLAGNIFKVNVAAGDSVAEGDV VIILEAMKMETEVRAAQAGTVSAVAVKEGDSVAVGDELIRL
Specific function: Lyase and sodium transporter [H]
COG id: COG5016
COG function: function code C; Pyruvate/oxaloacetate carboxyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotinyl-binding domain [H]
Homologues:
Organism=Homo sapiens, GI106049528, Length=630, Percent_Identity=33.6507936507937, Blast_Score=286, Evalue=5e-77, Organism=Homo sapiens, GI106049295, Length=630, Percent_Identity=33.6507936507937, Blast_Score=286, Evalue=5e-77, Organism=Homo sapiens, GI106049292, Length=630, Percent_Identity=33.6507936507937, Blast_Score=286, Evalue=5e-77, Organism=Caenorhabditis elegans, GI17562816, Length=627, Percent_Identity=32.3763955342903, Blast_Score=304, Evalue=1e-82, Organism=Saccharomyces cerevisiae, GI6319695, Length=629, Percent_Identity=33.0683624801272, Blast_Score=308, Evalue=2e-84, Organism=Saccharomyces cerevisiae, GI6321376, Length=623, Percent_Identity=33.3868378812199, Blast_Score=304, Evalue=3e-83, Organism=Drosophila melanogaster, GI24652212, Length=634, Percent_Identity=32.018927444795, Blast_Score=298, Evalue=8e-81, Organism=Drosophila melanogaster, GI24652210, Length=634, Percent_Identity=32.018927444795, Blast_Score=298, Evalue=8e-81, Organism=Drosophila melanogaster, GI24652214, Length=634, Percent_Identity=32.018927444795, Blast_Score=298, Evalue=8e-81, Organism=Drosophila melanogaster, GI19921944, Length=634, Percent_Identity=32.018927444795, Blast_Score=298, Evalue=8e-81, Organism=Drosophila melanogaster, GI24652216, Length=634, Percent_Identity=32.018927444795, Blast_Score=298, Evalue=8e-81, Organism=Drosophila melanogaster, GI281363050, Length=634, Percent_Identity=32.018927444795, Blast_Score=298, Evalue=1e-80, Organism=Drosophila melanogaster, GI24652224, Length=634, Percent_Identity=32.018927444795, Blast_Score=298, Evalue=1e-80, Organism=Drosophila melanogaster, GI24652222, Length=634, Percent_Identity=32.018927444795, Blast_Score=298, Evalue=1e-80, Organism=Drosophila melanogaster, GI24652220, Length=634, Percent_Identity=32.018927444795, Blast_Score=298, Evalue=1e-80, Organism=Drosophila melanogaster, GI24652218, Length=634, Percent_Identity=32.018927444795, Blast_Score=298, Evalue=1e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001882 - InterPro: IPR000089 - InterPro: IPR003379 - InterPro: IPR005776 - InterPro: IPR000891 - InterPro: IPR011053 [H]
Pfam domain/function: PF00364 Biotin_lipoyl; PF00682 HMGL-like; PF02436 PYC_OADA [H]
EC number: =4.1.1.3 [H]
Molecular weight: Translated: 64702; Mature: 64571
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS00165 DEHYDRATASE_SER_THR ; PS50991 PYR_CT ; PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTQRPLGITDVVLRDAHQSLFATRMRLDDMLPIAEKLDRVGFWSLESWGGATFDACIR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHH YLGEDPWARIRALKEAMPNTPQQMLLRGQNLLGYRHYADDVVDAFVERARANGVDVFRVF HHCCCHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH DAMNDTRNLERALKAVVACEGHAQGTLAYTVSPVHTLESWLDMAKRIEDMGAHSLAIKDM HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHH AGLLTPYMAHELVSRLKQTVALPIHVHCHATTGLSTATLLKAVEAGADTVDTAISSMAMT HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH YGHSPTESLVAMLRETPRDTGLDLELLEDIAAYFREVRKKYTAFEGSLRGIDSRILVAQV CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEEEC PGGMLTNMEGQLKEQGAGDRLDEVLGEIPRVREDLGYIPLVTPTSQIVGTQAVMNVMMGS CCCCEECCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHH RYQSISKEVQALLKGEYGAAPAPFDADLQARALAGEQPITCRPADRLAPEMERLAAELKE HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH KAGTDAVRLAEGERETDDVLTYALFPQIGFKFLAHRDDPSAFEPAPQAPGETPPPSRDES HCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PATAPSAAPRAPETYTVTVNGKAYVVEVAEGGEVSQVAARADASPAAAPAPASGEAITAP CCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEC LAGNIFKVNVAAGDSVAEGDVVIILEAMKMETEVRAAQAGTVSAVAVKEGDSVAVGDELI CCCCEEEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHCCCCEEEEEEECCCCEEECHHHH RL CC >Mature Secondary Structure SDTQRPLGITDVVLRDAHQSLFATRMRLDDMLPIAEKLDRVGFWSLESWGGATFDACIR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHH YLGEDPWARIRALKEAMPNTPQQMLLRGQNLLGYRHYADDVVDAFVERARANGVDVFRVF HHCCCHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH DAMNDTRNLERALKAVVACEGHAQGTLAYTVSPVHTLESWLDMAKRIEDMGAHSLAIKDM HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHH AGLLTPYMAHELVSRLKQTVALPIHVHCHATTGLSTATLLKAVEAGADTVDTAISSMAMT HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH YGHSPTESLVAMLRETPRDTGLDLELLEDIAAYFREVRKKYTAFEGSLRGIDSRILVAQV CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEEEC PGGMLTNMEGQLKEQGAGDRLDEVLGEIPRVREDLGYIPLVTPTSQIVGTQAVMNVMMGS CCCCEECCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHH RYQSISKEVQALLKGEYGAAPAPFDADLQARALAGEQPITCRPADRLAPEMERLAAELKE HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH KAGTDAVRLAEGERETDDVLTYALFPQIGFKFLAHRDDPSAFEPAPQAPGETPPPSRDES HCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PATAPSAAPRAPETYTVTVNGKAYVVEVAEGGEVSQVAARADASPAAAPAPASGEAITAP CCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEC LAGNIFKVNVAAGDSVAEGDVVIILEAMKMETEVRAAQAGTVSAVAVKEGDSVAVGDELI CCCCEEEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHCCCCEEEEEEECCCCEEECHHHH RL CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2454915 [H]